RNA–Protein interactions for RNA: ENST00000553289.5

SYNE2-208, Transcript of spectrin repeat containing nuclear envelope protein 2, humanhuman

TSL 2

Gene SYNE2, Length 5,261 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYNE2-208ENST00000553289 FER1L6Q2WGJ9 1857 aa10.3□□□□□ -0.76
SYNE2-208ENST00000553289 SCN9AQ15858 1988 aa10.3□□□□□ -0.76
SYNE2-208ENST00000553289 OR2W5A6NFC9 320 aa10.3□□□□□ -0.76
SYNE2-208ENST00000553289 HRASP01112 189 aa10.3□□□□□ -0.76
SYNE2-208ENST00000553289 ACSM4P0C7M7 580 aa10.3□□□□□ -0.76
SYNE2-208ENST00000553289 DRD3P35462 400 aa10.3□□□□□ -0.76
SYNE2-208ENST00000553289 KIR2DS2P43631 304 aa10.3□□□□□ -0.76
SYNE2-208ENST00000553289 NXPH1P58417 271 aa10.3□□□□□ -0.76
SYNE2-208ENST00000553289 UBE3DQ7Z6J8 389 aa10.3□□□□□ -0.76
SYNE2-208ENST00000553289 C2CD4CQ8TF44 421 aa10.3□□□□□ -0.76
SYNE2-208ENST00000553289 ARHGAP5-AS1Q96IT6 56 aa10.3□□□□□ -0.76
SYNE2-208ENST00000553289 ZFP64Q9NPA5 681 aa10.3□□□□□ -0.76
SYNE2-208ENST00000553289 P4HTMQ9NXG6 502 aa10.3□□□□□ -0.76
SYNE2-208ENST00000553289 ADAMTS7Q9UKP4 1686 aa10.3□□□□□ -0.76
SYNE2-208ENST00000553289 PJVKQ0ZLH3 352 aa10.3□□□□□ -0.76
SYNE2-208ENST00000553289 DHRS2Q13268 280 aa10.3□□□□□ -0.76
SYNE2-208ENST00000553289 IL13RA2Q14627 380 aa10.3□□□□□ -0.76
SYNE2-208ENST00000553289 ISXQ2M1V0 245 aa10.3□□□□□ -0.76
SYNE2-208ENST00000553289 TCTN1Q2MV58 587 aa10.3□□□□□ -0.76
SYNE2-208ENST00000553289 OTPQ5XKR4 325 aa10.3□□□□□ -0.76
SYNE2-208ENST00000553289 DMKNQ6E0U4 476 aaPredicted RBP10.3□□□□□ -0.76
SYNE2-208ENST00000553289 SLC36A1Q7Z2H8 476 aa10.3□□□□□ -0.76
SYNE2-208ENST00000553289 NPEPL1Q8NDH3 523 aa10.3□□□□□ -0.76
SYNE2-208ENST00000553289 C10orf35Q96D05 121 aa10.3□□□□□ -0.76
SYNE2-208ENST00000553289 TMEM56Q96MV1 263 aa10.3□□□□□ -0.76
SYNE2-208ENST00000553289 PLSCR3Q9NRY6 295 aa10.3□□□□□ -0.76
SYNE2-208ENST00000553289 FBXO34Q9NWN3 711 aa10.3□□□□□ -0.76
SYNE2-208ENST00000553289 ANKRD20A5PA0PJZ0 165 aa10.3□□□□□ -0.76
SYNE2-208ENST00000553289 HMSDA8MTL9 139 aa10.3□□□□□ -0.76
SYNE2-208ENST00000553289 SEC14L6B5MCN3 397 aa10.3□□□□□ -0.76
SYNE2-208ENST00000553289 NDUFB3O43676 98 aa10.3□□□□□ -0.76
SYNE2-208ENST00000553289 DUS4LO95620 317 aaKnown RBP10.3□□□□□ -0.76
SYNE2-208ENST00000553289 CD96P40200 585 aa10.3□□□□□ -0.76
SYNE2-208ENST00000553289 CDKN2AP42771 156 aaKnown RBP10.3□□□□□ -0.76
SYNE2-208ENST00000553289 CLPPQ16740 277 aaPredicted RBP10.3□□□□□ -0.76
SYNE2-208ENST00000553289 OR6X1Q8NH79 312 aa10.3□□□□□ -0.76
SYNE2-208ENST00000553289 PDCD6O75340 191 aa10.29□□□□□ -0.76
SYNE2-208ENST00000553289 RAB7AP51149 207 aa10.29□□□□□ -0.76
SYNE2-208ENST00000553289 FMODQ06828 376 aa10.29□□□□□ -0.76
SYNE2-208ENST00000553289 SURF2Q15527 256 aaPredicted RBP10.29□□□□□ -0.76
SYNE2-208ENST00000553289 ST3GAL2Q16842 350 aa10.29□□□□□ -0.76
SYNE2-208ENST00000553289 C8orf82Q6P1X6 216 aaPredicted RBP10.29□□□□□ -0.76
SYNE2-208ENST00000553289 NEIL1Q96FI4 390 aaPredicted RBP10.29□□□□□ -0.76
SYNE2-208ENST00000553289 MYOZ1Q9NP98 299 aaPredicted RBP10.29□□□□□ -0.76
SYNE2-208ENST00000553289 UQCC1Q9NVA1 299 aa10.29□□□□□ -0.76
SYNE2-208ENST00000553289 RASL12Q9NYN1 266 aa10.29□□□□□ -0.76
SYNE2-208ENST00000553289 YTHDF2Q9Y5A9 579 aaKnown RBP10.29□□□□□ -0.76
SYNE2-208ENST00000553289 OR5B21A6NL26 309 aa10.29□□□□□ -0.76
SYNE2-208ENST00000553289 OGG1O15527 345 aa10.29□□□□□ -0.76
SYNE2-208ENST00000553289 CDC14BO60729 498 aa10.29□□□□□ -0.76
SYNE2-208ENST00000553289 CALCRP30988 508 aa10.29□□□□□ -0.76
SYNE2-208ENST00000553289 ZNF766Q5HY98 468 aa10.29□□□□□ -0.76
SYNE2-208ENST00000553289 MRM1Q6IN84 353 aaKnown RBP10.29□□□□□ -0.76
SYNE2-208ENST00000553289 RHBDD2Q6NTF9 364 aa10.29□□□□□ -0.76
SYNE2-208ENST00000553289 NHLRC1Q6VVB1 395 aa10.29□□□□□ -0.76
SYNE2-208ENST00000553289 TMEM104Q8NE00 496 aa10.29□□□□□ -0.76
SYNE2-208ENST00000553289 PLA2G2FQ9BZM2 168 aa10.29□□□□□ -0.76
SYNE2-208ENST00000553289 ZNF107Q9UII5 783 aaPredicted RBP10.29□□□□□ -0.76
SYNE2-208ENST00000553289 C9orf170A2RU37 121 aa10.29□□□□□ -0.76
SYNE2-208ENST00000553289 GPANK1O95872 356 aa10.29□□□□□ -0.76
SYNE2-208ENST00000553289 TMEM11P17152 192 aa10.29□□□□□ -0.76
SYNE2-208ENST00000553289 RANP62826 216 aaKnown RBP10.29□□□□□ -0.76
SYNE2-208ENST00000553289 ZNF816Q0VGE8 651 aaPredicted RBP10.29□□□□□ -0.76
SYNE2-208ENST00000553289 GUSBP11Q6P575 273 aa10.29□□□□□ -0.76
SYNE2-208ENST00000553289 OR13G1Q8NGZ3 307 aa10.29□□□□□ -0.76
SYNE2-208ENST00000553289 CTNNBIP1Q9NSA3 81 aaPredicted RBP10.29□□□□□ -0.76
SYNE2-208ENST00000553289 H0Y8G0 127 aa10.29□□□□□ -0.76
SYNE2-208ENST00000553289 RER1O15258 196 aa10.29□□□□□ -0.76
SYNE2-208ENST00000553289 RFC3P40938 356 aa10.29□□□□□ -0.76
SYNE2-208ENST00000553289 ACER2Q5QJU3 275 aa10.29□□□□□ -0.76
SYNE2-208ENST00000553289 LSMEM1Q8N8F7 131 aa10.29□□□□□ -0.76
SYNE2-208ENST00000553289 NAA60Q9H7X0 242 aa10.29□□□□□ -0.76
SYNE2-208ENST00000553289 TIMM9Q9Y5J7 89 aa10.29□□□□□ -0.76
SYNE2-208ENST00000553289 IGHV1OR15-9A0A0B4J2B8 117 aa10.28□□□□□ -0.76
SYNE2-208ENST00000553289 MASP2O00187 686 aa10.28□□□□□ -0.76
SYNE2-208ENST00000553289 CD160O95971 181 aa10.28□□□□□ -0.76
SYNE2-208ENST00000553289 NGFP01138 241 aa10.28□□□□□ -0.76
SYNE2-208ENST00000553289 EPHA8P29322 1005 aaPredicted RBP10.28□□□□□ -0.76
SYNE2-208ENST00000553289 FABP9Q0Z7S8 132 aa10.28□□□□□ -0.76
SYNE2-208ENST00000553289 GUK1Q16774 197 aa10.28□□□□□ -0.76
SYNE2-208ENST00000553289 MUC20Q8N307 709 aaPredicted RBP10.28□□□□□ -0.76
SYNE2-208ENST00000553289 NECAP1Q8NC96 275 aa10.28□□□□□ -0.76
SYNE2-208ENST00000553289 TGIF2Q9GZN2 237 aa10.28□□□□□ -0.76
SYNE2-208ENST00000553289 CDK5RAP2Q96SN8 1893 aa10.28□□□□□ -0.76
SYNE2-208ENST00000553289 TRBV5-3A0A0A0MS03 114 aa10.28□□□□□ -0.76
SYNE2-208ENST00000553289 IGHV3-64DA0A0J9YX35 117 aa10.28□□□□□ -0.76
SYNE2-208ENST00000553289 UBE2L5PA0A1B0GUS4 154 aa10.28□□□□□ -0.76
SYNE2-208ENST00000553289 SFTA3P0C7M3 94 aa10.28□□□□□ -0.76
SYNE2-208ENST00000553289 PRDX4Q13162 271 aa10.28□□□□□ -0.76
SYNE2-208ENST00000553289 PPP1R1AQ13522 171 aa10.28□□□□□ -0.76
SYNE2-208ENST00000553289 HLXQ14774 488 aaPredicted RBP10.28□□□□□ -0.76
SYNE2-208ENST00000553289 PRSS54Q6PEW0 395 aa10.28□□□□□ -0.76
SYNE2-208ENST00000553289 THSD4Q6ZMP0 1018 aa10.28□□□□□ -0.76
SYNE2-208ENST00000553289 TMEM230Q96A57 120 aa10.28□□□□□ -0.76
SYNE2-208ENST00000553289 ZG16BQ96DA0 208 aa10.28□□□□□ -0.76
SYNE2-208ENST00000553289 SF3B5Q9BWJ5 86 aaKnown RBP10.28□□□□□ -0.76
SYNE2-208ENST00000553289 B3GALNT1O75752 331 aa10.28□□□□□ -0.76
SYNE2-208ENST00000553289 IGHA1P01876 353 aa10.28□□□□□ -0.76
SYNE2-208ENST00000553289 ETFRF1Q6IPR1 90 aa10.28□□□□□ -0.76
SYNE2-208ENST00000553289 DGAT2L6Q6ZPD8 337 aa10.28□□□□□ -0.76
Retrieved 100 of 20,778 RNA–protein pairs in 33.9 ms