RNA–Protein interactions for RNA: ENST00000553039.1

CKAP4-203, Transcript of cytoskeleton associated protein 4, humanhuman

TSL 4

Gene CKAP4, Length 573 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CKAP4-203ENST00000553039 MLNRO43193 412 aa4.08□□□□□ -1.76
CKAP4-203ENST00000553039 SGCEO43556 437 aa4.08□□□□□ -1.76
CKAP4-203ENST00000553039 TRMUO75648 421 aaKnown RBP4.08□□□□□ -1.76
CKAP4-203ENST00000553039 SNRNP70P08621 437 aaKnown RBP4.08□□□□□ -1.76
CKAP4-203ENST00000553039 PRR23D2P0DMB1 279 aaPredicted RBP4.08□□□□□ -1.76
CKAP4-203ENST00000553039 TMEM11P17152 192 aa4.08□□□□□ -1.76
CKAP4-203ENST00000553039 NDUFB7P17568 137 aa4.08□□□□□ -1.76
CKAP4-203ENST00000553039 SLC35B1P78383 322 aa4.08□□□□□ -1.76
CKAP4-203ENST00000553039 HOXC5Q00444 222 aa4.08□□□□□ -1.76
CKAP4-203ENST00000553039 LRRC74AQ0VAA2 488 aa4.08□□□□□ -1.76
CKAP4-203ENST00000553039 BNIP1Q12981 228 aa4.08□□□□□ -1.76
CKAP4-203ENST00000553039 KIR2DS1Q14954 304 aa4.08□□□□□ -1.76
CKAP4-203ENST00000553039 SSX2Q16385 188 aa4.08□□□□□ -1.76
CKAP4-203ENST00000553039 MEP1BQ16820 701 aa4.08□□□□□ -1.76
CKAP4-203ENST00000553039 C6orf136Q5SQH8 315 aa4.08□□□□□ -1.76
CKAP4-203ENST00000553039 EPGNQ6UW88 154 aa4.08□□□□□ -1.76
CKAP4-203ENST00000553039 ZNF621Q6ZSS3 439 aa4.08□□□□□ -1.76
CKAP4-203ENST00000553039 MSANTD1Q6ZTZ1 278 aa4.08□□□□□ -1.76
CKAP4-203ENST00000553039 FAM185AQ8N0U4 392 aa4.08□□□□□ -1.76
CKAP4-203ENST00000553039 ZBTB8BQ8NAP8 495 aaPredicted RBP4.08□□□□□ -1.76
CKAP4-203ENST00000553039 BHLHE23Q8NDY6 225 aa4.08□□□□□ -1.76
CKAP4-203ENST00000553039 KLHL30-AS1Q8NEE0 82 aa4.08□□□□□ -1.76
CKAP4-203ENST00000553039 OR8U1Q8NH10 309 aa4.08□□□□□ -1.76
CKAP4-203ENST00000553039 RP9Q8TA86 221 aaKnown RBP4.08□□□□□ -1.76
CKAP4-203ENST00000553039 TMEM170AQ8WVE7 144 aa4.08□□□□□ -1.76
CKAP4-203ENST00000553039 NABP1Q96AH0 204 aa4.08□□□□□ -1.76
CKAP4-203ENST00000553039 MNTQ99583 582 aa4.08□□□□□ -1.76
CKAP4-203ENST00000553039 SEPHS2Q99611 448 aa4.08□□□□□ -1.76
CKAP4-203ENST00000553039 EBF4Q9BQW3 602 aa4.08□□□□□ -1.76
CKAP4-203ENST00000553039 SRSF8Q9BRL6 282 aaKnown RBP4.08□□□□□ -1.76
CKAP4-203ENST00000553039 CCDC28BQ9BUN5 200 aa4.08□□□□□ -1.76
CKAP4-203ENST00000553039 CADM1Q9BY67 442 aaKnown RBP4.08□□□□□ -1.76
CKAP4-203ENST00000553039 DNTTIP1Q9H147 329 aa4.08□□□□□ -1.76
CKAP4-203ENST00000553039 DCLRE1BQ9H816 532 aa4.08□□□□□ -1.76
CKAP4-203ENST00000553039 EVA1AQ9H8M9 152 aa4.08□□□□□ -1.76
CKAP4-203ENST00000553039 RNPEPL1Q9HAU8 725 aa4.08□□□□□ -1.76
CKAP4-203ENST00000553039 SAR1AQ9NR31 198 aa4.08□□□□□ -1.76
CKAP4-203ENST00000553039 C1orf123Q9NWV4 160 aa4.08□□□□□ -1.76
CKAP4-203ENST00000553039 PTTG3PQ9NZH4 202 aa4.08□□□□□ -1.76
CKAP4-203ENST00000553039 SACSQ9NZJ4 4579 aa4.08□□□□□ -1.76
CKAP4-203ENST00000553039 P2RX2Q9UBL9 471 aa4.08□□□□□ -1.76
CKAP4-203ENST00000553039 RRP15Q9Y3B9 282 aaKnown RBP4.08□□□□□ -1.76
CKAP4-203ENST00000553039 FIS1Q9Y3D6 152 aa4.08□□□□□ -1.76
CKAP4-203ENST00000553039 TBL2Q9Y4P3 447 aaKnown RBP4.08□□□□□ -1.76
CKAP4-203ENST00000553039 DNAJC15Q9Y5T4 150 aa4.08□□□□□ -1.76
CKAP4-203ENST00000553039 PCLOQ9Y6V0 5065 aa4.08□□□□□ -1.76
CKAP4-203ENST00000553039 GAGE12BA1L429 117 aa4.07□□□□□ -1.76
CKAP4-203ENST00000553039 GAGE12HA6NDE8 117 aa4.07□□□□□ -1.76
CKAP4-203ENST00000553039 OR6C68A6NDL8 312 aa4.07□□□□□ -1.76
CKAP4-203ENST00000553039 OR6C6A6NF89 314 aa4.07□□□□□ -1.76
CKAP4-203ENST00000553039 E9PBE3 544 aa4.07□□□□□ -1.76
CKAP4-203ENST00000553039 SLC22A2O15244 555 aa4.07□□□□□ -1.76
CKAP4-203ENST00000553039 PTBP3O95758 552 aaKnown RBP4.07□□□□□ -1.76
CKAP4-203ENST00000553039 CH25HO95992 272 aa4.07□□□□□ -1.76
CKAP4-203ENST00000553039 HLA-DQA2P01906 255 aa4.07□□□□□ -1.76
CKAP4-203ENST00000553039 ALDOCP09972 364 aaKnown RBP4.07□□□□□ -1.76
CKAP4-203ENST00000553039 PGA5P0DJD9 388 aa4.07□□□□□ -1.76
CKAP4-203ENST00000553039 UMPSP11172 480 aa4.07□□□□□ -1.76
CKAP4-203ENST00000553039 MSR1P21757 451 aa4.07□□□□□ -1.76
CKAP4-203ENST00000553039 CALB2P22676 271 aa4.07□□□□□ -1.76
CKAP4-203ENST00000553039 CNTFRP26992 372 aa4.07□□□□□ -1.76
CKAP4-203ENST00000553039 BRS3P32247 399 aa4.07□□□□□ -1.76
CKAP4-203ENST00000553039 S100A3P33764 101 aa4.07□□□□□ -1.76
CKAP4-203ENST00000553039 MNAT1P51948 309 aa4.07□□□□□ -1.76
CKAP4-203ENST00000553039 DLX1P56177 255 aa4.07□□□□□ -1.76
CKAP4-203ENST00000553039 NCALDP61601 193 aa4.07□□□□□ -1.76
CKAP4-203ENST00000553039 EMX2Q04743 252 aa4.07□□□□□ -1.76
CKAP4-203ENST00000553039 SCN1BQ07699 218 aa4.07□□□□□ -1.76
CKAP4-203ENST00000553039 CD47Q08722 323 aa4.07□□□□□ -1.76
CKAP4-203ENST00000553039 OR1Q1Q15612 314 aa4.07□□□□□ -1.76
CKAP4-203ENST00000553039 PRAMEF6Q5VXH4 476 aa4.07□□□□□ -1.76
CKAP4-203ENST00000553039 HCP5Q6MZN7 132 aa4.07□□□□□ -1.76
CKAP4-203ENST00000553039 TTC33Q6PID6 262 aaPredicted RBP4.07□□□□□ -1.76
CKAP4-203ENST00000553039 SLC25A47Q6Q0C1 308 aa4.07□□□□□ -1.76
CKAP4-203ENST00000553039 LCNL1Q6ZST4 164 aa4.07□□□□□ -1.76
CKAP4-203ENST00000553039 RANBP3LQ86VV4 465 aaPredicted RBP4.07□□□□□ -1.76
CKAP4-203ENST00000553039 SGPP2Q8IWX5 399 aa4.07□□□□□ -1.76
CKAP4-203ENST00000553039 NOXO1Q8NFA2 376 aa4.07□□□□□ -1.76
CKAP4-203ENST00000553039 OR13D1Q8NGV5 346 aa4.07□□□□□ -1.76
CKAP4-203ENST00000553039 OR1F12Q8NHA8 337 aa4.07□□□□□ -1.76
CKAP4-203ENST00000553039 CHPT1Q8WUD6 406 aa4.07□□□□□ -1.76
CKAP4-203ENST00000553039 SLC38A5Q8WUX1 472 aa4.07□□□□□ -1.76
CKAP4-203ENST00000553039 TWIST2Q8WVJ9 160 aa4.07□□□□□ -1.76
CKAP4-203ENST00000553039 ST6GALNAC6Q969X2 333 aa4.07□□□□□ -1.76
CKAP4-203ENST00000553039 EME1Q96AY2 570 aa4.07□□□□□ -1.76
CKAP4-203ENST00000553039 PPP1R36Q96LQ0 422 aa4.07□□□□□ -1.76
CKAP4-203ENST00000553039 PITX2Q99697 317 aa4.07□□□□□ -1.76
CKAP4-203ENST00000553039 ALG12Q9BV10 488 aa4.07□□□□□ -1.76
CKAP4-203ENST00000553039 ST6GALNAC5Q9BVH7 336 aa4.07□□□□□ -1.76
CKAP4-203ENST00000553039 ALG8Q9BVK2 526 aa4.07□□□□□ -1.76
CKAP4-203ENST00000553039 HRH4Q9H3N8 390 aa4.07□□□□□ -1.76
CKAP4-203ENST00000553039 TUBB1Q9H4B7 451 aa4.07□□□□□ -1.76
CKAP4-203ENST00000553039 INIPQ9NRY2 104 aa4.07□□□□□ -1.76
CKAP4-203ENST00000553039 GLS2Q9UI32 602 aa4.07□□□□□ -1.76
CKAP4-203ENST00000553039 BTNL2Q9UIR0 455 aa4.07□□□□□ -1.76
CKAP4-203ENST00000553039 ZNF229Q9UJW7 825 aa4.07□□□□□ -1.76
CKAP4-203ENST00000553039 UGT2A1Q9Y4X1 527 aa4.07□□□□□ -1.76
CKAP4-203ENST00000553039 TANC2Q9HCD6 1990 aa4.07□□□□□ -1.76
CKAP4-203ENST00000553039 IGHV3OR15-7A0A075B7D8 119 aa4.06□□□□□ -1.76
CKAP4-203ENST00000553039 TRAV34A0A0B4J273 112 aa4.06□□□□□ -1.76
Retrieved 100 of 20,778 RNA–protein pairs in 32.2 ms