RNA–Protein interactions for RNA: ENST00000551425.1

PTCH1-222, Transcript of patched 1, humanhuman

TSL 1 (best)

Gene PTCH1, Length 241 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTCH1-222ENST00000551425 ARPC3O15145 178 aa9.46□□□□□ -0.9
PTCH1-222ENST00000551425 MTRF1O75570 445 aaKnown RBP9.46□□□□□ -0.9
PTCH1-222ENST00000551425 RBP4P02753 201 aa9.46□□□□□ -0.9
PTCH1-222ENST00000551425 ZNF823P16415 610 aa9.46□□□□□ -0.9
PTCH1-222ENST00000551425 CFL1P23528 166 aaKnown RBP9.46□□□□□ -0.9
PTCH1-222ENST00000551425 PRDX6P30041 224 aa9.46□□□□□ -0.9
PTCH1-222ENST00000551425 ECI1P42126 302 aa9.46□□□□□ -0.9
PTCH1-222ENST00000551425 RPS27P42677 84 aaKnown RBP9.46□□□□□ -0.9
PTCH1-222ENST00000551425 GSK3AP49840 483 aa9.46□□□□□ -0.9
PTCH1-222ENST00000551425 SLC34A1Q06495 639 aa9.46□□□□□ -0.9
PTCH1-222ENST00000551425 TIGD6Q17RP2 521 aa9.46□□□□□ -0.9
PTCH1-222ENST00000551425 KLHL12Q53G59 568 aa9.46□□□□□ -0.9
PTCH1-222ENST00000551425 C9orf66Q5T8R8 295 aa9.46□□□□□ -0.9
PTCH1-222ENST00000551425 LCN8Q6JVE9 175 aa9.46□□□□□ -0.9
PTCH1-222ENST00000551425 THAP5Q7Z6K1 395 aa9.46□□□□□ -0.9
PTCH1-222ENST00000551425 FTMTQ8N4E7 242 aa9.46□□□□□ -0.9
PTCH1-222ENST00000551425 OR2T27Q8NH04 317 aa9.46□□□□□ -0.9
PTCH1-222ENST00000551425 CAPSLQ8WWF8 208 aa9.46□□□□□ -0.9
PTCH1-222ENST00000551425 REEP6Q96HR9 211 aa9.46□□□□□ -0.9
PTCH1-222ENST00000551425 SH3GL1Q99961 368 aa9.46□□□□□ -0.9
PTCH1-222ENST00000551425 YY1AP1Q9H869 796 aa9.46□□□□□ -0.9
PTCH1-222ENST00000551425 SP140LQ9H930 580 aa9.46□□□□□ -0.9
PTCH1-222ENST00000551425 ABCB9Q9NP78 766 aa9.46□□□□□ -0.9
PTCH1-222ENST00000551425 PSMB11A5LHX3 300 aa9.45□□□□□ -0.9
PTCH1-222ENST00000551425 OR6C68A6NDL8 312 aa9.45□□□□□ -0.9
PTCH1-222ENST00000551425 TBX1O43435 398 aa9.45□□□□□ -0.9
PTCH1-222ENST00000551425 AMY1AP04745 511 aa9.45□□□□□ -0.9
PTCH1-222ENST00000551425 AMY2AP04746 511 aa9.45□□□□□ -0.9
PTCH1-222ENST00000551425 IGHV1-8P0DP01 117 aa9.45□□□□□ -0.9
PTCH1-222ENST00000551425 COX4I1P13073 169 aa9.45□□□□□ -0.9
PTCH1-222ENST00000551425 HIST1H1CP16403 213 aaKnown RBP9.45□□□□□ -0.9
PTCH1-222ENST00000551425 OMPP47874 163 aa9.45□□□□□ -0.9
PTCH1-222ENST00000551425 SEC23BQ15437 767 aa9.45□□□□□ -0.9
PTCH1-222ENST00000551425 TAF13Q15543 124 aa9.45□□□□□ -0.9
PTCH1-222ENST00000551425 COQ5Q5HYK3 327 aa9.45□□□□□ -0.9
PTCH1-222ENST00000551425 SMARCD3Q6STE5 483 aa9.45□□□□□ -0.9
PTCH1-222ENST00000551425 C18orf65Q6ZTR6 163 aa9.45□□□□□ -0.9
PTCH1-222ENST00000551425 DCXRQ7Z4W1 244 aa9.45□□□□□ -0.9
PTCH1-222ENST00000551425 ZNF561Q8N587 486 aa9.45□□□□□ -0.9
PTCH1-222ENST00000551425 OR4M1Q8NGD0 313 aa9.45□□□□□ -0.9
PTCH1-222ENST00000551425 OR8J3Q8NGG0 315 aa9.45□□□□□ -0.9
PTCH1-222ENST00000551425 OR4K13Q8NH42 304 aa9.45□□□□□ -0.9
PTCH1-222ENST00000551425 RNF170Q96K19 258 aa9.45□□□□□ -0.9
PTCH1-222ENST00000551425 FGF23Q9GZV9 251 aaPredicted RBP9.45□□□□□ -0.9
PTCH1-222ENST00000551425 SCOCQ9UIL1 159 aa9.45□□□□□ -0.9
PTCH1-222ENST00000551425 ZNF256Q9Y2P7 627 aaPredicted RBP9.45□□□□□ -0.9
PTCH1-222ENST00000551425 UNC119BA6NIH7 251 aa9.44□□□□□ -0.9
PTCH1-222ENST00000551425 ZNF850A8MQ14 1090 aa9.44□□□□□ -0.9
PTCH1-222ENST00000551425 NUDT19A8MXV4 375 aa9.44□□□□□ -0.9
PTCH1-222ENST00000551425 SLC1A7O00341 560 aa9.44□□□□□ -0.9
PTCH1-222ENST00000551425 OR2F2O95006 317 aa9.44□□□□□ -0.9
PTCH1-222ENST00000551425 CST4P01036 141 aa9.44□□□□□ -0.9
PTCH1-222ENST00000551425 NPPAP01160 153 aa9.44□□□□□ -0.9
PTCH1-222ENST00000551425 PSKH1P11801 424 aa9.44□□□□□ -0.9
PTCH1-222ENST00000551425 PRDX4Q13162 271 aa9.44□□□□□ -0.9
PTCH1-222ENST00000551425 DYNC1I2Q13409 638 aaKnown RBP9.44□□□□□ -0.9
PTCH1-222ENST00000551425 KRT72Q14CN4 511 aa9.44□□□□□ -0.9
PTCH1-222ENST00000551425 KCTD8Q6ZWB6 473 aa9.44□□□□□ -0.9
PTCH1-222ENST00000551425 TRPM8Q7Z2W7 1104 aa9.44□□□□□ -0.9
PTCH1-222ENST00000551425 VTCN1Q7Z7D3 282 aa9.44□□□□□ -0.9
PTCH1-222ENST00000551425 CD177Q8N6Q3 437 aa9.44□□□□□ -0.9
PTCH1-222ENST00000551425 KLHL30-AS1Q8NEE0 82 aa9.44□□□□□ -0.9
PTCH1-222ENST00000551425 HPSE2Q8WWQ2 592 aa9.44□□□□□ -0.9
PTCH1-222ENST00000551425 SLAMF6Q96DU3 332 aa9.44□□□□□ -0.9
PTCH1-222ENST00000551425 RAX2Q96IS3 184 aa9.44□□□□□ -0.9
PTCH1-222ENST00000551425 RBM14Q96PK6 669 aaKnown RBP9.44□□□□□ -0.9
PTCH1-222ENST00000551425 SLC25A33Q9BSK2 321 aa9.44□□□□□ -0.9
PTCH1-222ENST00000551425 C1orf21Q9H246 121 aa9.44□□□□□ -0.9
PTCH1-222ENST00000551425 FN3KQ9H479 309 aa9.44□□□□□ -0.9
PTCH1-222ENST00000551425 ZMAT4Q9H898 229 aa9.44□□□□□ -0.9
PTCH1-222ENST00000551425 CENPMQ9NSP4 180 aa9.44□□□□□ -0.9
PTCH1-222ENST00000551425 GID8Q9NWU2 228 aa9.44□□□□□ -0.9
PTCH1-222ENST00000551425 RASL12Q9NYN1 266 aa9.44□□□□□ -0.9
PTCH1-222ENST00000551425 A0A1W2PRQ8 180 aa9.43□□□□□ -0.9
PTCH1-222ENST00000551425 RFPL4AA6NLU0 287 aa9.43□□□□□ -0.9
PTCH1-222ENST00000551425 ZNF878C9JN71 531 aa9.43□□□□□ -0.9
PTCH1-222ENST00000551425 RFPL4AL1F8VTS6 287 aa9.43□□□□□ -0.9
PTCH1-222ENST00000551425 CCL24O00175 119 aa9.43□□□□□ -0.9
PTCH1-222ENST00000551425 MRASO14807 208 aa9.43□□□□□ -0.9
PTCH1-222ENST00000551425 JTBO76095 146 aa9.43□□□□□ -0.9
PTCH1-222ENST00000551425 ZNF728P0DKX0 622 aa9.43□□□□□ -0.9
PTCH1-222ENST00000551425 CX3CR1P49238 355 aa9.43□□□□□ -0.9
PTCH1-222ENST00000551425 IL18R1Q13478 541 aa9.43□□□□□ -0.9
PTCH1-222ENST00000551425 DGCR6Q14129 220 aa9.43□□□□□ -0.9
PTCH1-222ENST00000551425 PLBD1Q6P4A8 553 aa9.43□□□□□ -0.9
PTCH1-222ENST00000551425 PRSS45Q7RTY3 260 aa9.43□□□□□ -0.9
PTCH1-222ENST00000551425 KRT77Q7Z794 578 aa9.43□□□□□ -0.9
PTCH1-222ENST00000551425 ZNF329Q86UD4 541 aa9.43□□□□□ -0.9
PTCH1-222ENST00000551425 ZNF695Q8IW36 515 aa9.43□□□□□ -0.9
PTCH1-222ENST00000551425 OR5M8Q8NGP6 311 aa9.43□□□□□ -0.9
PTCH1-222ENST00000551425 ZNF671Q8TAW3 534 aa9.43□□□□□ -0.9
PTCH1-222ENST00000551425 ISOC1Q96CN7 298 aa9.43□□□□□ -0.9
PTCH1-222ENST00000551425 NSL1Q96IY1 281 aa9.43□□□□□ -0.9
PTCH1-222ENST00000551425 OR51I2Q9H344 312 aa9.43□□□□□ -0.9
PTCH1-222ENST00000551425 EFCAB1Q9HAE3 211 aa9.43□□□□□ -0.9
PTCH1-222ENST00000551425 EDA2RQ9HAV5 297 aa9.43□□□□□ -0.9
PTCH1-222ENST00000551425 TBC1D23Q9NUY8 699 aa9.43□□□□□ -0.9
PTCH1-222ENST00000551425 TAGLN3Q9UI15 199 aa9.43□□□□□ -0.9
PTCH1-222ENST00000551425 TVP23AA6NH52 213 aa9.42□□□□□ -0.9
PTCH1-222ENST00000551425 SH2D7A6NKC9 451 aaPredicted RBP9.42□□□□□ -0.9
Retrieved 100 of 20,778 RNA–protein pairs in 51 ms