RNA–Protein interactions for RNA: ENST00000551245.5

TROAP-215, Transcript of trophinin associated protein, humanhuman

APPRIS ALT2 TSL 2 BASIC

Gene TROAP, Length 2,771 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TROAP-215ENST00000551245 ZNF35P13682 527 aa10.13□□□□□ -0.79
TROAP-215ENST00000551245 ABOP16442 354 aa10.13□□□□□ -0.79
TROAP-215ENST00000551245 POU3F4P49335 361 aa10.13□□□□□ -0.79
TROAP-215ENST00000551245 TAS2R20P59543 309 aa10.13□□□□□ -0.79
TROAP-215ENST00000551245 MRPS10P82664 201 aaKnown RBP10.13□□□□□ -0.79
TROAP-215ENST00000551245 SNAI3Q3KNW1 292 aa10.13□□□□□ -0.79
TROAP-215ENST00000551245 C17orf107Q6ZR85 190 aa10.13□□□□□ -0.79
TROAP-215ENST00000551245 COLCA1Q6ZS62 124 aa10.13□□□□□ -0.79
TROAP-215ENST00000551245 OR5AS1Q8N127 324 aa10.13□□□□□ -0.79
TROAP-215ENST00000551245 CPEB3Q8NE35 698 aaKnown RBP10.13□□□□□ -0.79
TROAP-215ENST00000551245 OR51D1Q8NGF3 324 aa10.13□□□□□ -0.79
TROAP-215ENST00000551245 OR5M9Q8NGP3 310 aa10.13□□□□□ -0.79
TROAP-215ENST00000551245 SSC4DQ8WTU2 575 aa10.13□□□□□ -0.79
TROAP-215ENST00000551245 PP6455Q8WZ26 134 aa10.13□□□□□ -0.79
TROAP-215ENST00000551245 C12orf49Q9H741 205 aa10.13□□□□□ -0.79
TROAP-215ENST00000551245 GOSR2O14653 212 aa10.12□□□□□ -0.79
TROAP-215ENST00000551245 RBBP9O75884 186 aa10.12□□□□□ -0.79
TROAP-215ENST00000551245 SPDEFO95238 335 aa10.12□□□□□ -0.79
TROAP-215ENST00000551245 TMIGD3P0DMS9 266 aaPredicted RBP10.12□□□□□ -0.79
TROAP-215ENST00000551245 GMFBP60983 142 aa10.12□□□□□ -0.79
TROAP-215ENST00000551245 KRTCAP3Q53RY4 240 aa10.12□□□□□ -0.79
TROAP-215ENST00000551245 MRPS24Q96EL2 167 aaKnown RBP10.12□□□□□ -0.79
TROAP-215ENST00000551245 ABHD17AQ96GS6 310 aa10.12□□□□□ -0.79
TROAP-215ENST00000551245 PCDHB16Q9NRJ7 776 aa10.12□□□□□ -0.79
TROAP-215ENST00000551245 FBLN5Q9UBX5 448 aa10.12□□□□□ -0.79
TROAP-215ENST00000551245 CGGBP1Q9UFW8 167 aaPredicted RBP10.12□□□□□ -0.79
TROAP-215ENST00000551245 TMEM272A0A1B0GTI8 110 aa10.12□□□□□ -0.79
TROAP-215ENST00000551245 F5H5P2 479 aa10.12□□□□□ -0.79
TROAP-215ENST00000551245 UCNP55089 124 aa10.12□□□□□ -0.79
TROAP-215ENST00000551245 PCGF3Q3KNV8 242 aa10.12□□□□□ -0.79
TROAP-215ENST00000551245 DCAF12L2Q5VW00 463 aa10.12□□□□□ -0.79
TROAP-215ENST00000551245 ZNF324BQ6AW86 544 aaPredicted RBP10.12□□□□□ -0.79
TROAP-215ENST00000551245 EIF4E3Q8N5X7 224 aaKnown RBP10.12□□□□□ -0.79
TROAP-215ENST00000551245 C9orf106Q8NAJ2 232 aa10.12□□□□□ -0.79
TROAP-215ENST00000551245 RELL2Q8NC24 303 aaPredicted RBP10.12□□□□□ -0.79
TROAP-215ENST00000551245 OR2AK2Q8NG84 335 aa10.12□□□□□ -0.79
TROAP-215ENST00000551245 OR52N4Q8NGI2 321 aa10.12□□□□□ -0.79
TROAP-215ENST00000551245 OR6K3Q8NGY3 331 aa10.12□□□□□ -0.79
TROAP-215ENST00000551245 SPSB4Q96A44 273 aa10.12□□□□□ -0.79
TROAP-215ENST00000551245 FBXO9Q9UK97 447 aaPredicted RBP10.12□□□□□ -0.79
TROAP-215ENST00000551245 CACNA1GO43497 2377 aa10.12□□□□□ -0.79
TROAP-215ENST00000551245 A0A096LPE4 126 aa10.11□□□□□ -0.79
TROAP-215ENST00000551245 A0A1W2PPZ6 126 aa10.11□□□□□ -0.79
TROAP-215ENST00000551245 SIGLEC5O15389 551 aa10.11□□□□□ -0.79
TROAP-215ENST00000551245 XRCC3O43542 346 aa10.11□□□□□ -0.79
TROAP-215ENST00000551245 LCATP04180 440 aa10.11□□□□□ -0.79
TROAP-215ENST00000551245 PRF1P14222 555 aa10.11□□□□□ -0.79
TROAP-215ENST00000551245 RAB6AP20340 208 aa10.11□□□□□ -0.79
TROAP-215ENST00000551245 PTGER4P35408 488 aa10.11□□□□□ -0.79
TROAP-215ENST00000551245 RBMS2Q15434 407 aaKnown RBP10.11□□□□□ -0.79
TROAP-215ENST00000551245 DNM1P46Q6ZS02 220 aa10.11□□□□□ -0.79
TROAP-215ENST00000551245 CCDC36Q8IYA8 594 aa10.11□□□□□ -0.79
TROAP-215ENST00000551245 MUC20Q8N307 709 aaPredicted RBP10.11□□□□□ -0.79
TROAP-215ENST00000551245 JAGN1Q8N5M9 183 aa10.11□□□□□ -0.79
TROAP-215ENST00000551245 OR13C9Q8NGT0 318 aa10.11□□□□□ -0.79
TROAP-215ENST00000551245 CHST5Q9GZS9 411 aa10.11□□□□□ -0.79
TROAP-215ENST00000551245 MFFQ9GZY8 342 aa10.11□□□□□ -0.79
TROAP-215ENST00000551245 LOC400499M0QZD8 3231 aa10.11□□□□□ -0.79
TROAP-215ENST00000551245 ASPMQ8IZT6 3477 aa10.11□□□□□ -0.79
TROAP-215ENST00000551245 MBD3L4A6NDZ8 208 aaPredicted RBP10.11□□□□□ -0.79
TROAP-215ENST00000551245 MBD3L3A6NE82 208 aaPredicted RBP10.11□□□□□ -0.79
TROAP-215ENST00000551245 ZNF503-AS2A6NEH8 195 aa10.11□□□□□ -0.79
TROAP-215ENST00000551245 MBD3L5A6NJ08 208 aaPredicted RBP10.11□□□□□ -0.79
TROAP-215ENST00000551245 DNASE2O00115 360 aaPredicted RBP10.11□□□□□ -0.79
TROAP-215ENST00000551245 CTAG2O75638 210 aa10.11□□□□□ -0.79
TROAP-215ENST00000551245 BPNT1O95861 308 aa10.11□□□□□ -0.79
TROAP-215ENST00000551245 HLA-HP01893 362 aa10.11□□□□□ -0.79
TROAP-215ENST00000551245 KIR2DL2P43627 348 aaPredicted RBP10.11□□□□□ -0.79
TROAP-215ENST00000551245 C9orf135Q5VTT2 229 aa10.11□□□□□ -0.79
TROAP-215ENST00000551245 LINC00518Q8N0U6 118 aa10.11□□□□□ -0.79
TROAP-215ENST00000551245 OR4D6Q8NGJ1 314 aa10.11□□□□□ -0.79
TROAP-215ENST00000551245 MBD3L2Q8NHZ7 208 aaPredicted RBP10.11□□□□□ -0.79
TROAP-215ENST00000551245 REEP6Q96HR9 211 aa10.11□□□□□ -0.79
TROAP-215ENST00000551245 CNTD2Q9H8S5 307 aa10.11□□□□□ -0.79
TROAP-215ENST00000551245 LOC100509620A0A075B734 347 aa10.1□□□□□ -0.79
TROAP-215ENST00000551245 A0A0A6YYH2 397 aa10.1□□□□□ -0.79
TROAP-215ENST00000551245 A6NJ64 397 aa10.1□□□□□ -0.79
TROAP-215ENST00000551245 XRCC2O43543 280 aa10.1□□□□□ -0.79
TROAP-215ENST00000551245 RLN2P04090 185 aa10.1□□□□□ -0.79
TROAP-215ENST00000551245 CRHP06850 196 aa10.1□□□□□ -0.79
TROAP-215ENST00000551245 HOXB1P14653 301 aaPredicted RBP10.1□□□□□ -0.79
TROAP-215ENST00000551245 FAUP35544 74 aaKnown RBP10.1□□□□□ -0.79
TROAP-215ENST00000551245 ARHGDIBP52566 201 aa10.1□□□□□ -0.79
TROAP-215ENST00000551245 TMPRSS3P57727 454 aa10.1□□□□□ -0.79
TROAP-215ENST00000551245 DEFA5Q01523 94 aa10.1□□□□□ -0.79
TROAP-215ENST00000551245 PLA2G7Q13093 441 aa10.1□□□□□ -0.79
TROAP-215ENST00000551245 GFOD2Q3B7J2 385 aa10.1□□□□□ -0.79
TROAP-215ENST00000551245 C11orf88Q6PI97 169 aa10.1□□□□□ -0.79
TROAP-215ENST00000551245 Q6ZT83 130 aa10.1□□□□□ -0.79
TROAP-215ENST00000551245 OR4D10Q8NGI6 311 aa10.1□□□□□ -0.79
TROAP-215ENST00000551245 OR4C16Q8NGL9 310 aa10.1□□□□□ -0.79
TROAP-215ENST00000551245 NANOS1Q8WY41 292 aaKnown RBP10.1□□□□□ -0.79
TROAP-215ENST00000551245 PLSCR4Q9NRQ2 329 aa10.1□□□□□ -0.79
TROAP-215ENST00000551245 TP53TG5Q9Y2B4 290 aa10.1□□□□□ -0.79
TROAP-215ENST00000551245 IGKV1-9A0A0C4DH69 117 aa10.1□□□□□ -0.79
TROAP-215ENST00000551245 WDR1O75083 606 aa10.1□□□□□ -0.79
TROAP-215ENST00000551245 ZNF93P35789 620 aaPredicted RBP10.1□□□□□ -0.79
TROAP-215ENST00000551245 EFNB2P52799 333 aa10.1□□□□□ -0.79
TROAP-215ENST00000551245 RAB1AP62820 205 aa10.1□□□□□ -0.79
TROAP-215ENST00000551245 QRFPP83859 136 aa10.1□□□□□ -0.79
Retrieved 100 of 20,778 RNA–protein pairs in 60.5 ms