RNA–Protein interactions for RNA: ENST00000545688.5

SNHG1-224, Transcript of small nucleolar RNA host gene 1, humanhuman

TSL 3

Gene SNHG1, Length 610 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNHG1-224ENST00000545688 PIK3IP1Q96FE7 263 aa2.12□□□□□ -2.07
SNHG1-224ENST00000545688 DCUN1D1Q96GG9 259 aa2.12□□□□□ -2.07
SNHG1-224ENST00000545688 SMIM10Q96HG1 83 aa2.12□□□□□ -2.07
SNHG1-224ENST00000545688 SAMD8Q96LT4 415 aa2.12□□□□□ -2.07
SNHG1-224ENST00000545688 UGT2B28Q9BY64 529 aa2.12□□□□□ -2.07
SNHG1-224ENST00000545688 CLSTN2Q9H4D0 955 aa2.12□□□□□ -2.07
SNHG1-224ENST00000545688 VPS37BQ9H9H4 285 aa2.12□□□□□ -2.07
SNHG1-224ENST00000545688 KLHL28Q9NXS3 571 aa2.12□□□□□ -2.07
SNHG1-224ENST00000545688 SPATA7Q9P0W8 599 aa2.12□□□□□ -2.07
SNHG1-224ENST00000545688 PCYOX1Q9UHG3 505 aa2.12□□□□□ -2.07
SNHG1-224ENST00000545688 CHCHD2Q9Y6H1 151 aaPredicted RBP2.12□□□□□ -2.07
SNHG1-224ENST00000545688 MED12LQ86YW9 2145 aa2.11□□□□□ -2.07
SNHG1-224ENST00000545688 GOLGA8QA0A0J9YX86 632 aa2.11□□□□□ -2.07
SNHG1-224ENST00000545688 TRBV11-1A0A0K0K1C0 115 aa2.11□□□□□ -2.07
SNHG1-224ENST00000545688 A0A1W2PNV4 684 aa2.11□□□□□ -2.07
SNHG1-224ENST00000545688 GOLGA8OA6NCC3 632 aa2.11□□□□□ -2.07
SNHG1-224ENST00000545688 KRT87PA6NCN2 255 aa2.11□□□□□ -2.07
SNHG1-224ENST00000545688 EEF1E1-BLOC1S5C9J1V9 151 aa2.11□□□□□ -2.07
SNHG1-224ENST00000545688 GOLGA8NF8WBI6 632 aa2.11□□□□□ -2.07
SNHG1-224ENST00000545688 GOLGA8MH3BSY2 632 aa2.11□□□□□ -2.07
SNHG1-224ENST00000545688 GOLGA8RI6L899 631 aa2.11□□□□□ -2.07
SNHG1-224ENST00000545688 EEF1E1O43324 174 aaKnown RBP2.11□□□□□ -2.07
SNHG1-224ENST00000545688 CHST10O43529 356 aa2.11□□□□□ -2.07
SNHG1-224ENST00000545688 OR1I1O60431 355 aa2.11□□□□□ -2.07
SNHG1-224ENST00000545688 VPS26AO75436 327 aa2.11□□□□□ -2.07
SNHG1-224ENST00000545688 RDH16O75452 317 aa2.11□□□□□ -2.07
SNHG1-224ENST00000545688 OR2J2O76002 312 aa2.11□□□□□ -2.07
SNHG1-224ENST00000545688 TGFAP01135 160 aa2.11□□□□□ -2.07
SNHG1-224ENST00000545688 FTH1P02794 183 aa2.11□□□□□ -2.07
SNHG1-224ENST00000545688 RPN2P04844 631 aa2.11□□□□□ -2.07
SNHG1-224ENST00000545688 CRHP06850 196 aa2.11□□□□□ -2.07
SNHG1-224ENST00000545688 PPIAL4GP0DN37 164 aa2.11□□□□□ -2.07
SNHG1-224ENST00000545688 SLC25A16P16260 332 aa2.11□□□□□ -2.07
SNHG1-224ENST00000545688 DESP17661 470 aa2.11□□□□□ -2.07
SNHG1-224ENST00000545688 IL1RNP18510 177 aa2.11□□□□□ -2.07
SNHG1-224ENST00000545688 FUT1P19526 365 aa2.11□□□□□ -2.07
SNHG1-224ENST00000545688 KDELR1P24390 212 aa2.11□□□□□ -2.07
SNHG1-224ENST00000545688 CMPK1P30085 196 aa2.11□□□□□ -2.07
SNHG1-224ENST00000545688 DNASE1L1P49184 302 aa2.11□□□□□ -2.07
SNHG1-224ENST00000545688 CDK9P50750 372 aaKnown RBP2.11□□□□□ -2.07
SNHG1-224ENST00000545688 PLGLB1Q02325 96 aa2.11□□□□□ -2.07
SNHG1-224ENST00000545688 ACVR1Q04771 509 aa2.11□□□□□ -2.07
SNHG1-224ENST00000545688 ARHGAP19Q14CB8 494 aa2.11□□□□□ -2.07
SNHG1-224ENST00000545688 C1QTNF12Q5T7M4 302 aa2.11□□□□□ -2.07
SNHG1-224ENST00000545688 ZNF550Q7Z398 422 aa2.11□□□□□ -2.07
SNHG1-224ENST00000545688 LUZP2Q86TE4 346 aa2.11□□□□□ -2.07
SNHG1-224ENST00000545688 ZNF567Q8N184 647 aa2.11□□□□□ -2.07
SNHG1-224ENST00000545688 C3orf56Q8N813 242 aa2.11□□□□□ -2.07
SNHG1-224ENST00000545688 OR5T3Q8NGG3 340 aa2.11□□□□□ -2.07
SNHG1-224ENST00000545688 OR52B4Q8NGK2 314 aa2.11□□□□□ -2.07
SNHG1-224ENST00000545688 C10orf105Q8TEF2 133 aa2.11□□□□□ -2.07
SNHG1-224ENST00000545688 ASZ1Q8WWH4 475 aa2.11□□□□□ -2.07
SNHG1-224ENST00000545688 ELMO1Q92556 727 aa2.11□□□□□ -2.07
SNHG1-224ENST00000545688 VAT1Q99536 393 aa2.11□□□□□ -2.07
SNHG1-224ENST00000545688 AICDAQ9GZX7 198 aa2.11□□□□□ -2.07
SNHG1-224ENST00000545688 RAB17Q9H0T7 212 aa2.11□□□□□ -2.07
SNHG1-224ENST00000545688 FAM96AQ9H5X1 160 aa2.11□□□□□ -2.07
SNHG1-224ENST00000545688 MRPS30Q9NP92 439 aaKnown RBP2.11□□□□□ -2.07
SNHG1-224ENST00000545688 NLE1Q9NVX2 485 aaPredicted RBP2.11□□□□□ -2.07
SNHG1-224ENST00000545688 HPF1Q9NWY4 346 aa2.11□□□□□ -2.07
SNHG1-224ENST00000545688 PLECQ15149 4684 aaKnown RBP2.11□□□□□ -2.07
SNHG1-224ENST00000545688 TENM2Q9NT68 2774 aa2.1□□□□□ -2.07
SNHG1-224ENST00000545688 DNAH7Q8WXX0 4024 aa2.1□□□□□ -2.07
SNHG1-224ENST00000545688 HUWE1Q7Z6Z7 4374 aaKnown RBP2.1□□□□□ -2.07
SNHG1-224ENST00000545688 C7orf66A4D0T2 115 aa2.1□□□□□ -2.07
SNHG1-224ENST00000545688 ZNF705GA8MUZ8 300 aaPredicted RBP2.1□□□□□ -2.07
SNHG1-224ENST00000545688 CCL22O00626 93 aa2.1□□□□□ -2.07
SNHG1-224ENST00000545688 PSIP1O75475 530 aaKnown RBP2.1□□□□□ -2.07
SNHG1-224ENST00000545688 PROSCO94903 275 aa2.1□□□□□ -2.07
SNHG1-224ENST00000545688 TGM6O95932 706 aa2.1□□□□□ -2.07
SNHG1-224ENST00000545688 OR56A5P0C7T3 313 aa2.1□□□□□ -2.07
SNHG1-224ENST00000545688 CCDC172P0C7W6 258 aa2.1□□□□□ -2.07
SNHG1-224ENST00000545688 POU2F1P14859 743 aa2.1□□□□□ -2.07
SNHG1-224ENST00000545688 ZNF708P17019 499 aa2.1□□□□□ -2.07
SNHG1-224ENST00000545688 PGAM1P18669 254 aa2.1□□□□□ -2.07
SNHG1-224ENST00000545688 USF1P22415 310 aaPredicted RBP2.1□□□□□ -2.07
SNHG1-224ENST00000545688 HSD17B7P56937 341 aa2.1□□□□□ -2.07
SNHG1-224ENST00000545688 RPS15AP62244 130 aaKnown RBP2.1□□□□□ -2.07
SNHG1-224ENST00000545688 HSF2Q03933 536 aa2.1□□□□□ -2.07
SNHG1-224ENST00000545688 KLHL30Q0D2K2 578 aa2.1□□□□□ -2.07
SNHG1-224ENST00000545688 COX19Q49B96 90 aa2.1□□□□□ -2.07
SNHG1-224ENST00000545688 DNLZQ5SXM8 178 aa2.1□□□□□ -2.07
SNHG1-224ENST00000545688 NCMAPQ5T1S8 102 aa2.1□□□□□ -2.07
SNHG1-224ENST00000545688 NIPAL1Q6NVV3 410 aa2.1□□□□□ -2.07
SNHG1-224ENST00000545688 OPN5Q6U736 354 aa2.1□□□□□ -2.07
SNHG1-224ENST00000545688 LYPD2Q6UXB3 125 aa2.1□□□□□ -2.07
SNHG1-224ENST00000545688 KIAA1328Q86T90 577 aa2.1□□□□□ -2.07
SNHG1-224ENST00000545688 MISPQ8IVT2 679 aa2.1□□□□□ -2.07
SNHG1-224ENST00000545688 PGAM4Q8N0Y7 254 aa2.1□□□□□ -2.07
SNHG1-224ENST00000545688 NUBPLQ8TB37 319 aa2.1□□□□□ -2.07
SNHG1-224ENST00000545688 RAB3IL1Q8TBN0 382 aa2.1□□□□□ -2.07
SNHG1-224ENST00000545688 RERGQ96A58 199 aaPredicted RBP2.1□□□□□ -2.07
SNHG1-224ENST00000545688 DNAJC1Q96KC8 554 aaKnown RBP2.1□□□□□ -2.07
SNHG1-224ENST00000545688 PRAP1Q96NZ9 151 aa2.1□□□□□ -2.07
SNHG1-224ENST00000545688 HBEGFQ99075 208 aa2.1□□□□□ -2.07
SNHG1-224ENST00000545688 TMEM246Q9BRR3 403 aa2.1□□□□□ -2.07
SNHG1-224ENST00000545688 MED18Q9BUE0 208 aa2.1□□□□□ -2.07
SNHG1-224ENST00000545688 ALG12Q9BV10 488 aa2.1□□□□□ -2.07
SNHG1-224ENST00000545688 GBA3Q9H227 469 aa2.1□□□□□ -2.07
SNHG1-224ENST00000545688 LIN28AQ9H9Z2 209 aaKnown RBP2.1□□□□□ -2.07
Retrieved 100 of 20,778 RNA–protein pairs in 31.8 ms