RNA–Protein interactions for RNA: ENST00000544484.5

CHD4-211, Transcript of chromodomain helicase DNA binding protein 4, humanhuman

TSL 2 BASIC

Gene CHD4, Length 6,554 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD4-211ENST00000544484 OR5V1Q9UGF6 321 aa11.41□□□□□ -0.58
CHD4-211ENST00000544484 RCL1Q9Y2P8 373 aaKnown RBP11.41□□□□□ -0.58
CHD4-211ENST00000544484 TRGV10A0A0A0MS01 117 aa11.41□□□□□ -0.58
CHD4-211ENST00000544484 DHRS3O75911 302 aa11.41□□□□□ -0.58
CHD4-211ENST00000544484 ASCL1P50553 236 aa11.41□□□□□ -0.58
CHD4-211ENST00000544484 ZXDAP98168 799 aa11.41□□□□□ -0.58
CHD4-211ENST00000544484 PDZK1IP1Q13113 114 aa11.41□□□□□ -0.58
CHD4-211ENST00000544484 PNLIPRP3Q17RR3 467 aa11.41□□□□□ -0.58
CHD4-211ENST00000544484 SLC25A32Q9H2D1 315 aa11.41□□□□□ -0.58
CHD4-211ENST00000544484 ADAMTS7Q9UKP4 1686 aa11.41□□□□□ -0.58
CHD4-211ENST00000544484 OR2M5A3KFT3 312 aa11.41□□□□□ -0.58
CHD4-211ENST00000544484 CLEC18AA5D8T8 446 aa11.41□□□□□ -0.58
CHD4-211ENST00000544484 LIMK1P53667 647 aa11.41□□□□□ -0.58
CHD4-211ENST00000544484 TMEM128Q5BJH2 165 aa11.41□□□□□ -0.58
CHD4-211ENST00000544484 TSEN54Q7Z6J9 526 aaKnown RBP11.41□□□□□ -0.58
CHD4-211ENST00000544484 CLEC18CQ8NCF0 446 aa11.41□□□□□ -0.58
CHD4-211ENST00000544484 VSTM2LQ96N03 204 aa11.41□□□□□ -0.58
CHD4-211ENST00000544484 PLEKHA2Q9HB19 425 aa11.41□□□□□ -0.58
CHD4-211ENST00000544484 EXOGQ9Y2C4 368 aaKnown RBP11.41□□□□□ -0.58
CHD4-211ENST00000544484 FAM96BQ9Y3D0 163 aa11.41□□□□□ -0.58
CHD4-211ENST00000544484 CCL27Q9Y4X3 112 aa11.41□□□□□ -0.58
CHD4-211ENST00000544484 A0A1W2PQF6 199 aa11.4□□□□□ -0.58
CHD4-211ENST00000544484 TXNDC12O95881 172 aa11.4□□□□□ -0.58
CHD4-211ENST00000544484 GNG10P50151 68 aa11.4□□□□□ -0.58
CHD4-211ENST00000544484 MRM1Q6IN84 353 aaKnown RBP11.4□□□□□ -0.58
CHD4-211ENST00000544484 KPTNQ9Y664 436 aa11.4□□□□□ -0.58
CHD4-211ENST00000544484 SRD5A2P31213 254 aa11.4□□□□□ -0.58
CHD4-211ENST00000544484 MVDP53602 400 aa11.4□□□□□ -0.58
CHD4-211ENST00000544484 LSM11P83369 360 aaKnown RBP eCLIP11.4□□□□□ -0.581e-6■□□□□ 9.8
CHD4-211ENST00000544484 PDZD11Q5EBL8 140 aa11.4□□□□□ -0.58
CHD4-211ENST00000544484 RPUSD3Q6P087 351 aaKnown RBP11.4□□□□□ -0.58
CHD4-211ENST00000544484 RXFP4Q8TDU9 374 aa11.4□□□□□ -0.58
CHD4-211ENST00000544484 AQP8O94778 261 aa11.4□□□□□ -0.58
CHD4-211ENST00000544484 ZBTB25P24278 435 aa11.4□□□□□ -0.58
CHD4-211ENST00000544484 PLA1AQ53H76 456 aa11.4□□□□□ -0.58
CHD4-211ENST00000544484 ZNF680Q8NEM1 530 aa11.4□□□□□ -0.58
CHD4-211ENST00000544484 SLC39A7Q92504 469 aa11.4□□□□□ -0.58
CHD4-211ENST00000544484 FN3KRPQ9HA64 309 aa11.4□□□□□ -0.58
CHD4-211ENST00000544484 TCFL5Q9UL49 500 aa11.4□□□□□ -0.58
CHD4-211ENST00000544484 ZNF727A8MUV8 499 aa11.4□□□□□ -0.58
CHD4-211ENST00000544484 M0R1X1 148 aa11.4□□□□□ -0.58
CHD4-211ENST00000544484 IGHV3-13P01766 116 aa11.4□□□□□ -0.58
CHD4-211ENST00000544484 IGHV3-7P01780 117 aa11.4□□□□□ -0.58
CHD4-211ENST00000544484 SOX8P57073 446 aa11.4□□□□□ -0.58
CHD4-211ENST00000544484 TNFSF14O43557 240 aa11.4□□□□□ -0.59
CHD4-211ENST00000544484 NGFP01138 241 aa11.4□□□□□ -0.59
CHD4-211ENST00000544484 FABP1P07148 127 aa11.4□□□□□ -0.59
CHD4-211ENST00000544484 SLC25A6P12236 298 aa11.4□□□□□ -0.59
CHD4-211ENST00000544484 TLE1Q04724 770 aa11.4□□□□□ -0.59
CHD4-211ENST00000544484 MOB3BQ86TA1 216 aa11.4□□□□□ -0.59
CHD4-211ENST00000544484 OR2Y1Q8NGV0 311 aa11.4□□□□□ -0.59
CHD4-211ENST00000544484 NKX6-2Q9C056 277 aaPredicted RBP11.4□□□□□ -0.59
CHD4-211ENST00000544484 ARPC4-TTLL3A0A0A6YYG9 625 aa11.39□□□□□ -0.59
CHD4-211ENST00000544484 M0R296 226 aa11.39□□□□□ -0.59
CHD4-211ENST00000544484 SOX15O60248 233 aa11.39□□□□□ -0.59
CHD4-211ENST00000544484 MRGPREQ86SM8 312 aa11.39□□□□□ -0.59
CHD4-211ENST00000544484 IER2Q9BTL4 223 aa11.39□□□□□ -0.59
CHD4-211ENST00000544484 TMEM30CPA0ZSE6 113 aa11.39□□□□□ -0.59
CHD4-211ENST00000544484 H7BYZ3 331 aa11.39□□□□□ -0.59
CHD4-211ENST00000544484 DHODHQ02127 395 aa11.39□□□□□ -0.59
CHD4-211ENST00000544484 CD300LDQ6UXZ3 194 aa11.39□□□□□ -0.59
CHD4-211ENST00000544484 C2CD4CQ8TF44 421 aa11.39□□□□□ -0.59
CHD4-211ENST00000544484 CLDN23Q96B33 292 aa11.39□□□□□ -0.59
CHD4-211ENST00000544484 GPR31O00270 319 aa11.39□□□□□ -0.59
CHD4-211ENST00000544484 HIST1H1DP16402 221 aaKnown RBP11.39□□□□□ -0.59
CHD4-211ENST00000544484 UBE2G2P60604 165 aa11.39□□□□□ -0.59
CHD4-211ENST00000544484 ZNF239Q16600 458 aaKnown RBP11.39□□□□□ -0.59
CHD4-211ENST00000544484 ZNF787Q6DD87 383 aa11.39□□□□□ -0.59
CHD4-211ENST00000544484 DBX2Q6ZNG2 339 aa11.39□□□□□ -0.59
CHD4-211ENST00000544484 HIST2H3AQ71DI3 136 aa11.39□□□□□ -0.59
CHD4-211ENST00000544484 ARRDC1Q8N5I2 433 aa11.39□□□□□ -0.59
CHD4-211ENST00000544484 OR5AP2Q8NGF4 316 aa11.39□□□□□ -0.59
CHD4-211ENST00000544484 ERRFI1Q9UJM3 462 aaPredicted RBP11.39□□□□□ -0.59
CHD4-211ENST00000544484 CYR61O00622 381 aa11.39□□□□□ -0.59
CHD4-211ENST00000544484 ONECUT2O95948 504 aa11.39□□□□□ -0.59
CHD4-211ENST00000544484 CD96P40200 585 aa11.39□□□□□ -0.59
CHD4-211ENST00000544484 PLAC9Q5JTB6 97 aa11.39□□□□□ -0.59
CHD4-211ENST00000544484 ACTR3CQ9C0K3 210 aaPredicted RBP11.39□□□□□ -0.59
CHD4-211ENST00000544484 V9GYS6 101 aa11.39□□□□□ -0.59
CHD4-211ENST00000544484 AHCTF1Q8WYP5 2266 aa11.39□□□□□ -0.59
CHD4-211ENST00000544484 OR2C1O95371 312 aa11.39□□□□□ -0.59
CHD4-211ENST00000544484 CEACAM6P40199 344 aa11.39□□□□□ -0.59
CHD4-211ENST00000544484 KIAA0141Q14154 515 aaPredicted RBP11.39□□□□□ -0.59
CHD4-211ENST00000544484 MICBQ29980 383 aa11.39□□□□□ -0.59
CHD4-211ENST00000544484 SLC16A12Q6ZSM3 486 aa11.39□□□□□ -0.59
CHD4-211ENST00000544484 SLC38A6Q8IZM9 456 aa11.39□□□□□ -0.59
CHD4-211ENST00000544484 TMEM52Q8NDY8 209 aa11.39□□□□□ -0.59
CHD4-211ENST00000544484 BPIFCQ8NFQ6 507 aa11.39□□□□□ -0.59
CHD4-211ENST00000544484 CCL17Q92583 94 aa11.39□□□□□ -0.59
CHD4-211ENST00000544484 TAAR6Q96RI8 345 aa11.39□□□□□ -0.59
CHD4-211ENST00000544484 SOX7Q9BT81 388 aa11.39□□□□□ -0.59
CHD4-211ENST00000544484 CNTD2Q9H8S5 307 aa11.39□□□□□ -0.59
CHD4-211ENST00000544484 NDUFB3O43676 98 aa11.38□□□□□ -0.59
CHD4-211ENST00000544484 CD37P11049 281 aa11.38□□□□□ -0.59
CHD4-211ENST00000544484 TNFRSF1AP19438 455 aa11.38□□□□□ -0.59
CHD4-211ENST00000544484 F2RP25116 425 aa11.38□□□□□ -0.59
CHD4-211ENST00000544484 SLC37A1P57057 533 aa11.38□□□□□ -0.59
CHD4-211ENST00000544484 MITD1Q8WV92 249 aa11.38□□□□□ -0.59
CHD4-211ENST00000544484 ACY3Q96HD9 319 aa11.38□□□□□ -0.59
CHD4-211ENST00000544484 ZNF275Q9NSD4 429 aaPredicted RBP11.38□□□□□ -0.59
Retrieved 100 of 20,778 RNA–protein pairs in 41.3 ms