RNA–Protein interactions for RNA: ENST00000543660.1

NPIPB4-219, Transcript of nuclear pore complex interacting protein family member B4, humanhuman

TSL 5

Gene NPIPB4, Length 353 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NPIPB4-219ENST00000543660 BTBD17A6NE02 478 aa3.93□□□□□ -1.78
NPIPB4-219ENST00000543660 ZNF726A6NNF4 738 aa3.93□□□□□ -1.78
NPIPB4-219ENST00000543660 E9PQ18 207 aa3.93□□□□□ -1.78
NPIPB4-219ENST00000543660 H3BSA7 217 aa3.93□□□□□ -1.78
NPIPB4-219ENST00000543660 RNASET2O00584 256 aaKnown RBP3.93□□□□□ -1.78
NPIPB4-219ENST00000543660 AZIN1O14977 448 aa3.93□□□□□ -1.78
NPIPB4-219ENST00000543660 XRCC3O43542 346 aa3.93□□□□□ -1.78
NPIPB4-219ENST00000543660 TIMM8AO60220 97 aaPredicted RBP3.93□□□□□ -1.78
NPIPB4-219ENST00000543660 ENTPD5O75356 428 aa3.93□□□□□ -1.78
NPIPB4-219ENST00000543660 NDUFB4O95168 129 aa3.93□□□□□ -1.78
NPIPB4-219ENST00000543660 FARS2O95363 451 aaKnown RBP3.93□□□□□ -1.78
NPIPB4-219ENST00000543660 CYB5R3P00387 301 aaPredicted RBP3.93□□□□□ -1.78
NPIPB4-219ENST00000543660 MT-ND1P03886 318 aa3.93□□□□□ -1.78
NPIPB4-219ENST00000543660 OPN1SWP03999 348 aa3.93□□□□□ -1.78
NPIPB4-219ENST00000543660 CSN3P07498 182 aa3.93□□□□□ -1.78
NPIPB4-219ENST00000543660 SNRPAP09012 282 aaKnown RBP3.93□□□□□ -1.78
NPIPB4-219ENST00000543660 FBP1P09467 338 aa3.93□□□□□ -1.78
NPIPB4-219ENST00000543660 NQO1P15559 274 aaKnown RBP3.93□□□□□ -1.78
NPIPB4-219ENST00000543660 PRPS1L1P21108 318 aa3.93□□□□□ -1.78
NPIPB4-219ENST00000543660 MSR1P21757 451 aa3.93□□□□□ -1.78
NPIPB4-219ENST00000543660 HOXD3P31249 432 aaPredicted RBP3.93□□□□□ -1.78
NPIPB4-219ENST00000543660 FCGR2BP31994 310 aaPredicted RBP3.93□□□□□ -1.78
NPIPB4-219ENST00000543660 PRDX2P32119 198 aa3.93□□□□□ -1.78
NPIPB4-219ENST00000543660 PHBP35232 272 aa3.93□□□□□ -1.78
NPIPB4-219ENST00000543660 PPT1P50897 306 aa3.93□□□□□ -1.78
NPIPB4-219ENST00000543660 DNAJB13P59910 316 aa3.93□□□□□ -1.78
NPIPB4-219ENST00000543660 KRTAP10-2P60368 255 aa3.93□□□□□ -1.78
NPIPB4-219ENST00000543660 NAA20P61599 178 aa3.93□□□□□ -1.78
NPIPB4-219ENST00000543660 PPP1CBP62140 327 aa3.93□□□□□ -1.78
NPIPB4-219ENST00000543660 ARF6P62330 175 aa3.93□□□□□ -1.78
NPIPB4-219ENST00000543660 CSNK2BP67870 215 aa3.93□□□□□ -1.78
NPIPB4-219ENST00000543660 HPCAP84074 193 aa3.93□□□□□ -1.78
NPIPB4-219ENST00000543660 PLP2Q04941 152 aa3.93□□□□□ -1.78
NPIPB4-219ENST00000543660 PUDPQ08623 228 aa3.93□□□□□ -1.78
NPIPB4-219ENST00000543660 BNIP1Q12981 228 aa3.93□□□□□ -1.78
NPIPB4-219ENST00000543660 GAGE2BQ13066 116 aa3.93□□□□□ -1.78
NPIPB4-219ENST00000543660 GNA13Q14344 377 aa3.93□□□□□ -1.78
NPIPB4-219ENST00000543660 USF2Q15853 346 aaPredicted RBP3.93□□□□□ -1.78
NPIPB4-219ENST00000543660 UGT3A2Q3SY77 523 aa3.93□□□□□ -1.78
NPIPB4-219ENST00000543660 SLC36A2Q495M3 483 aa3.93□□□□□ -1.78
NPIPB4-219ENST00000543660 GAGE2EQ4V326 116 aa3.93□□□□□ -1.78
NPIPB4-219ENST00000543660 PABPC1L2AQ5JQF8 200 aa3.93□□□□□ -1.78
NPIPB4-219ENST00000543660 FAM201AQ5SY85 155 aa3.93□□□□□ -1.78
NPIPB4-219ENST00000543660 OR4F3Q6IEY1 312 aa3.93□□□□□ -1.78
NPIPB4-219ENST00000543660 GAGE2AQ6NT46 116 aa3.93□□□□□ -1.78
NPIPB4-219ENST00000543660 CRIP3Q6Q6R5 217 aa3.93□□□□□ -1.78
NPIPB4-219ENST00000543660 ZNF836Q6ZNA1 936 aa3.93□□□□□ -1.78
NPIPB4-219ENST00000543660 KCTD8Q6ZWB6 473 aa3.93□□□□□ -1.78
NPIPB4-219ENST00000543660 SERPINA11Q86U17 422 aa3.93□□□□□ -1.78
NPIPB4-219ENST00000543660 NOXA1Q86UR1 476 aa3.93□□□□□ -1.78
NPIPB4-219ENST00000543660 VRK2Q86Y07 508 aa3.93□□□□□ -1.78
NPIPB4-219ENST00000543660 OFCC1Q8IZS5 231 aa3.93□□□□□ -1.78
NPIPB4-219ENST00000543660 OR5R1Q8NH85 324 aa3.93□□□□□ -1.78
NPIPB4-219ENST00000543660 OR2T6Q8NHC8 308 aa3.93□□□□□ -1.78
NPIPB4-219ENST00000543660 VANGL1Q8TAA9 524 aaPredicted RBP3.93□□□□□ -1.78
NPIPB4-219ENST00000543660 ZNF420Q8TAQ5 688 aaPredicted RBP3.93□□□□□ -1.78
NPIPB4-219ENST00000543660 SLC38A4Q969I6 547 aa3.93□□□□□ -1.78
NPIPB4-219ENST00000543660 ZNF582Q96NG8 517 aaPredicted RBP3.93□□□□□ -1.78
NPIPB4-219ENST00000543660 OR2V2Q96R30 315 aa3.93□□□□□ -1.78
NPIPB4-219ENST00000543660 NAPGQ99747 312 aaPredicted RBP3.93□□□□□ -1.78
NPIPB4-219ENST00000543660 SH3GL1Q99961 368 aa3.93□□□□□ -1.78
NPIPB4-219ENST00000543660 TMEM43Q9BTV4 400 aa3.93□□□□□ -1.78
NPIPB4-219ENST00000543660 C1orf50Q9BV19 199 aa3.93□□□□□ -1.78
NPIPB4-219ENST00000543660 MRPL13Q9BYD1 178 aaKnown RBP3.93□□□□□ -1.78
NPIPB4-219ENST00000543660 TMPRSS5Q9H3S3 457 aa3.93□□□□□ -1.78
NPIPB4-219ENST00000543660 MAN2C1Q9NTJ4 1040 aa3.93□□□□□ -1.78
NPIPB4-219ENST00000543660 NUDT15Q9NV35 164 aa3.93□□□□□ -1.78
NPIPB4-219ENST00000543660 EIF3KQ9UBQ5 218 aaKnown RBP3.93□□□□□ -1.78
NPIPB4-219ENST00000543660 GAGE2DQ9UEU5 116 aa3.93□□□□□ -1.78
NPIPB4-219ENST00000543660 IFT52Q9Y366 437 aa3.93□□□□□ -1.78
NPIPB4-219ENST00000543660 FIS1Q9Y3D6 152 aa3.93□□□□□ -1.78
NPIPB4-219ENST00000543660 TRAV36DV7A0A075B6V5 113 aa3.92□□□□□ -1.78
NPIPB4-219ENST00000543660 A0A087WUV0 522 aaPredicted RBP3.92□□□□□ -1.78
NPIPB4-219ENST00000543660 A0A0U1RRA0 63 aa3.92□□□□□ -1.78
NPIPB4-219ENST00000543660 EXOC1LA0A1B0GW35 172 aa3.92□□□□□ -1.78
NPIPB4-219ENST00000543660 C9orf118A6NHY6 69 aa3.92□□□□□ -1.78
NPIPB4-219ENST00000543660 PLPP3O14495 311 aa3.92□□□□□ -1.78
NPIPB4-219ENST00000543660 CHEK1O14757 476 aa3.92□□□□□ -1.78
NPIPB4-219ENST00000543660 SURF4O15260 269 aa3.92□□□□□ -1.78
NPIPB4-219ENST00000543660 FCN3O75636 299 aa3.92□□□□□ -1.78
NPIPB4-219ENST00000543660 ZFPL1O95159 310 aa3.92□□□□□ -1.78
NPIPB4-219ENST00000543660 DUS4LO95620 317 aaKnown RBP3.92□□□□□ -1.78
NPIPB4-219ENST00000543660 BGLAPP02818 100 aa3.92□□□□□ -1.78
NPIPB4-219ENST00000543660 KITLGP21583 273 aa3.92□□□□□ -1.78
NPIPB4-219ENST00000543660 GCAP28676 217 aa3.92□□□□□ -1.78
NPIPB4-219ENST00000543660 S100A5P33763 92 aa3.92□□□□□ -1.78
NPIPB4-219ENST00000543660 RPS19P39019 145 aaKnown RBP3.92□□□□□ -1.78
NPIPB4-219ENST00000543660 PMELP40967 661 aa3.92□□□□□ -1.78
NPIPB4-219ENST00000543660 CRATP43155 626 aa3.92□□□□□ -1.78
NPIPB4-219ENST00000543660 BIDP55957 195 aa3.92□□□□□ -1.78
NPIPB4-219ENST00000543660 CLDN8P56748 225 aa3.92□□□□□ -1.78
NPIPB4-219ENST00000543660 SLC35A2P78381 396 aa3.92□□□□□ -1.78
NPIPB4-219ENST00000543660 MRPS15P82914 257 aaKnown RBP3.92□□□□□ -1.78
NPIPB4-219ENST00000543660 HOXC5Q00444 222 aa3.92□□□□□ -1.78
NPIPB4-219ENST00000543660 PLA2G7Q13093 441 aa3.92□□□□□ -1.78
NPIPB4-219ENST00000543660 HIST3H3Q16695 136 aa3.92□□□□□ -1.78
NPIPB4-219ENST00000543660 RNF151Q2KHN1 245 aa3.92□□□□□ -1.78
NPIPB4-219ENST00000543660 ZNF181Q2M3W8 571 aa3.92□□□□□ -1.78
NPIPB4-219ENST00000543660 LIN52Q52LA3 116 aa3.92□□□□□ -1.78
NPIPB4-219ENST00000543660 FAM76BQ5HYJ3 339 aa3.92□□□□□ -1.78
Retrieved 100 of 20,778 RNA–protein pairs in 49 ms