RNA–Protein interactions for RNA: ENST00000543633.5

VPS33A-208, Transcript of VPS33A, CORVET/HOPS core subunit, humanhuman

TSL 5

Gene VPS33A, Length 2,019 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS33A-208ENST00000543633 QDPRP09417 244 aa12.04□□□□□ -0.48
VPS33A-208ENST00000543633 SEC11BP0C7V7 166 aa12.04□□□□□ -0.48
VPS33A-208ENST00000543633 SMIM6P0DI80 62 aa12.04□□□□□ -0.48
VPS33A-208ENST00000543633 GLB1P16278 677 aa12.04□□□□□ -0.48
VPS33A-208ENST00000543633 ZNF43P17038 809 aa12.04□□□□□ -0.48
VPS33A-208ENST00000543633 FCGR2CP31995 323 aa12.04□□□□□ -0.48
VPS33A-208ENST00000543633 CDAP32320 146 aa12.04□□□□□ -0.48
VPS33A-208ENST00000543633 EIF1P41567 113 aaKnown RBP12.04□□□□□ -0.48
VPS33A-208ENST00000543633 C10orf128Q5T292 105 aa12.04□□□□□ -0.48
VPS33A-208ENST00000543633 Q6ZRG5 221 aa12.04□□□□□ -0.48
VPS33A-208ENST00000543633 OR2M3Q8NG83 312 aa12.04□□□□□ -0.48
VPS33A-208ENST00000543633 RLN3Q8WXF3 142 aa12.04□□□□□ -0.48
VPS33A-208ENST00000543633 HAS2Q92819 552 aa12.04□□□□□ -0.48
VPS33A-208ENST00000543633 WNT2BQ93097 391 aa12.04□□□□□ -0.48
VPS33A-208ENST00000543633 CPNE2Q96FN4 548 aaPredicted RBP12.04□□□□□ -0.48
VPS33A-208ENST00000543633 USB1Q9BQ65 265 aaKnown RBP12.04□□□□□ -0.48
VPS33A-208ENST00000543633 PRR13Q9NZ81 148 aa12.04□□□□□ -0.48
VPS33A-208ENST00000543633 GSKIPQ9P0R6 139 aa12.04□□□□□ -0.48
VPS33A-208ENST00000543633 CACFD1Q9UGQ2 172 aa12.04□□□□□ -0.48
VPS33A-208ENST00000543633 STARD10Q9Y365 291 aa12.04□□□□□ -0.48
VPS33A-208ENST00000543633 IGHV3-20A0A0C4DH32 117 aa12.04□□□□□ -0.48
VPS33A-208ENST00000543633 CYC1P08574 325 aa12.04□□□□□ -0.48
VPS33A-208ENST00000543633 MSR1P21757 451 aa12.04□□□□□ -0.48
VPS33A-208ENST00000543633 PTAFRP25105 342 aa12.04□□□□□ -0.48
VPS33A-208ENST00000543633 RAB5CP51148 216 aa12.04□□□□□ -0.48
VPS33A-208ENST00000543633 HIST1H3AP68431 136 aa12.04□□□□□ -0.48
VPS33A-208ENST00000543633 SLC35A1P78382 337 aa12.04□□□□□ -0.48
VPS33A-208ENST00000543633 ACY1Q03154 408 aa12.04□□□□□ -0.48
VPS33A-208ENST00000543633 HIST2H3PS2Q5TEC6 136 aa12.04□□□□□ -0.48
VPS33A-208ENST00000543633 DHRS11Q6UWP2 260 aa12.04□□□□□ -0.48
VPS33A-208ENST00000543633 C16orf47Q6ZP98 133 aaPredicted RBP12.04□□□□□ -0.48
VPS33A-208ENST00000543633 HIST2H3AQ71DI3 136 aa12.04□□□□□ -0.48
VPS33A-208ENST00000543633 GJC3Q8NFK1 279 aa12.04□□□□□ -0.48
VPS33A-208ENST00000543633 SEMA6DQ8NFY4 1073 aa12.04□□□□□ -0.48
VPS33A-208ENST00000543633 OR9K2Q8NGE7 335 aa12.04□□□□□ -0.48
VPS33A-208ENST00000543633 SLC22A8Q8TCC7 542 aa12.04□□□□□ -0.48
VPS33A-208ENST00000543633 LYZL4Q96KX0 146 aa12.04□□□□□ -0.48
VPS33A-208ENST00000543633 S100A13Q99584 98 aa12.04□□□□□ -0.48
VPS33A-208ENST00000543633 METTL7AQ9H8H3 244 aa12.04□□□□□ -0.48
VPS33A-208ENST00000543633 LMAN1LQ9HAT1 526 aa12.04□□□□□ -0.48
VPS33A-208ENST00000543633 WNT16Q9UBV4 365 aa12.04□□□□□ -0.48
VPS33A-208ENST00000543633 ATXN7L1Q9ULK2 861 aaPredicted RBP12.04□□□□□ -0.48
VPS33A-208ENST00000543633 AMDHD2Q9Y303 409 aa12.04□□□□□ -0.48
VPS33A-208ENST00000543633 C1orf196B1AJZ1 125 aa12.03□□□□□ -0.48
VPS33A-208ENST00000543633 SHISA8B8ZZ34 492 aa12.03□□□□□ -0.48
VPS33A-208ENST00000543633 E5RGE8 158 aa12.03□□□□□ -0.48
VPS33A-208ENST00000543633 SERPINA5P05154 406 aa12.03□□□□□ -0.48
VPS33A-208ENST00000543633 RCC1P18754 421 aaPredicted RBP12.03□□□□□ -0.48
VPS33A-208ENST00000543633 DTYMKP23919 212 aa12.03□□□□□ -0.48
VPS33A-208ENST00000543633 OTX1P32242 354 aaPredicted RBP12.03□□□□□ -0.48
VPS33A-208ENST00000543633 CD80P33681 288 aa12.03□□□□□ -0.48
VPS33A-208ENST00000543633 STARD6P59095 220 aa12.03□□□□□ -0.48
VPS33A-208ENST00000543633 SPEM2Q0P670 501 aa12.03□□□□□ -0.48
VPS33A-208ENST00000543633 MFAP5Q13361 173 aa12.03□□□□□ -0.48
VPS33A-208ENST00000543633 LRTM2Q8N967 370 aa12.03□□□□□ -0.48
VPS33A-208ENST00000543633 SLC38A9Q8NBW4 561 aa12.03□□□□□ -0.48
VPS33A-208ENST00000543633 LILRB1Q8NHL6 650 aaPredicted RBP12.03□□□□□ -0.48
VPS33A-208ENST00000543633 SNIP1Q8TAD8 396 aaKnown RBP12.03□□□□□ -0.48
VPS33A-208ENST00000543633 GALNT14Q96FL9 552 aa12.03□□□□□ -0.48
VPS33A-208ENST00000543633 Q96M66 194 aa12.03□□□□□ -0.48
VPS33A-208ENST00000543633 TAAR9Q96RI9 348 aa12.03□□□□□ -0.48
VPS33A-208ENST00000543633 CMSS1Q9BQ75 279 aaKnown RBP12.03□□□□□ -0.48
VPS33A-208ENST00000543633 HSF4Q9ULV5 492 aa12.03□□□□□ -0.48
VPS33A-208ENST00000543633 NSG2Q9Y328 171 aa12.03□□□□□ -0.48
VPS33A-208ENST00000543633 BORCS7-ASMTA0A0B4J1R7 106 aa12.03□□□□□ -0.48
VPS33A-208ENST00000543633 STMND1H3BQB6 276 aa12.03□□□□□ -0.48
VPS33A-208ENST00000543633 MT-ND4LP03901 98 aa12.03□□□□□ -0.48
VPS33A-208ENST00000543633 NFYBP25208 207 aa12.03□□□□□ -0.48
VPS33A-208ENST00000543633 GUCA1AP43080 201 aaPredicted RBP12.03□□□□□ -0.48
VPS33A-208ENST00000543633 KCNJ3P48549 501 aa12.03□□□□□ -0.48
VPS33A-208ENST00000543633 TMEM33P57088 247 aa12.03□□□□□ -0.48
VPS33A-208ENST00000543633 HABP2Q14520 560 aaPredicted RBP12.03□□□□□ -0.48
VPS33A-208ENST00000543633 GPR157Q5UAW9 335 aa12.03□□□□□ -0.48
VPS33A-208ENST00000543633 GGNBP1Q5YKI7 109 aa12.03□□□□□ -0.48
VPS33A-208ENST00000543633 FADS6Q8N9I5 356 aa12.03□□□□□ -0.48
VPS33A-208ENST00000543633 SPSB1Q96BD6 273 aa12.03□□□□□ -0.48
VPS33A-208ENST00000543633 TCEAL7Q9BRU2 100 aa12.03□□□□□ -0.48
VPS33A-208ENST00000543633 TPSD1Q9BZJ3 242 aa12.03□□□□□ -0.48
VPS33A-208ENST00000543633 NELFAQ9H3P2 528 aa12.03□□□□□ -0.48
VPS33A-208ENST00000543633 ZNF160Q9HCG1 818 aa12.03□□□□□ -0.48
VPS33A-208ENST00000543633 STRAPQ9Y3F4 350 aaKnown RBP12.03□□□□□ -0.48
VPS33A-208ENST00000543633 UBE2CO00762 179 aa12.02□□□□□ -0.49
VPS33A-208ENST00000543633 ZFAND5O76080 213 aa12.02□□□□□ -0.49
VPS33A-208ENST00000543633 ONECUT2O95948 504 aa12.02□□□□□ -0.49
VPS33A-208ENST00000543633 SERPINA2P20848 420 aa12.02□□□□□ -0.49
VPS33A-208ENST00000543633 OR2A2Q6IF42 318 aa12.02□□□□□ -0.49
VPS33A-208ENST00000543633 PLXDC2Q6UX71 529 aa12.02□□□□□ -0.49
VPS33A-208ENST00000543633 WDR77Q9BQA1 342 aaPredicted RBP12.02□□□□□ -0.49
VPS33A-208ENST00000543633 GINS3Q9BRX5 216 aa12.02□□□□□ -0.49
VPS33A-208ENST00000543633 ZNF2Q9BSG1 426 aaPredicted RBP12.02□□□□□ -0.49
VPS33A-208ENST00000543633 SUCNR1Q9BXA5 334 aa12.02□□□□□ -0.49
VPS33A-208ENST00000543633 SLC7A5P2Q9GIP4 190 aa12.02□□□□□ -0.49
VPS33A-208ENST00000543633 ZNF701Q9NV72 531 aaPredicted RBP12.02□□□□□ -0.49
VPS33A-208ENST00000543633 LUZP4Q9P127 313 aa12.02□□□□□ -0.49
VPS33A-208ENST00000543633 PADI1Q9ULC6 663 aa12.02□□□□□ -0.49
VPS33A-208ENST00000543633 A0A087WZY1 265 aa12.01□□□□□ -0.49
VPS33A-208ENST00000543633 C19orf67A6NJJ6 358 aa12.01□□□□□ -0.49
VPS33A-208ENST00000543633 TSPAN15O95858 294 aa12.01□□□□□ -0.49
VPS33A-208ENST00000543633 KNG1P01042 644 aa12.01□□□□□ -0.49
VPS33A-208ENST00000543633 DANCRP0C864 163 aa12.01□□□□□ -0.49
Retrieved 100 of 20,778 RNA–protein pairs in 29.3 ms