RNA–Protein interactions for RNA: ENST00000542570.5

TOP3A-208, Transcript of DNA topoisomerase III alpha, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TOP3A, Length 4,116 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TOP3A-208ENST00000542570 SLC25A30Q5SVS4 291 aa8.9□□□□□ -0.98
TOP3A-208ENST00000542570 CLVS2Q5SYC1 327 aa8.9□□□□□ -0.98
TOP3A-208ENST00000542570 ZNF546Q86UE3 836 aa8.9□□□□□ -0.98
TOP3A-208ENST00000542570 MDP1Q86V88 176 aa8.9□□□□□ -0.98
TOP3A-208ENST00000542570 CMTM1Q8IZ96 169 aa8.9□□□□□ -0.98
TOP3A-208ENST00000542570 OR10R2Q8NGX6 335 aa8.9□□□□□ -0.98
TOP3A-208ENST00000542570 PGLYRP3Q96LB9 341 aa8.9□□□□□ -0.98
TOP3A-208ENST00000542570 CFAP54Q96N23 3096 aa8.9□□□□□ -0.98
TOP3A-208ENST00000542570 LRRK1Q38SD2 2015 aa8.9□□□□□ -0.98
TOP3A-208ENST00000542570 ZNF816-ZNF321PA0A0X1KG74 233 aa8.9□□□□□ -0.98
TOP3A-208ENST00000542570 LYPD3O95274 346 aa8.9□□□□□ -0.98
TOP3A-208ENST00000542570 CRYABP02511 175 aaKnown RBP8.9□□□□□ -0.98
TOP3A-208ENST00000542570 TNFSF4P23510 183 aa8.9□□□□□ -0.98
TOP3A-208ENST00000542570 CAMK2BQ13554 666 aa8.9□□□□□ -0.98
TOP3A-208ENST00000542570 CLPPQ16740 277 aaPredicted RBP8.9□□□□□ -0.98
TOP3A-208ENST00000542570 AADACL3Q5VUY0 350 aa8.9□□□□□ -0.98
TOP3A-208ENST00000542570 SSX9Q7RTT3 188 aa8.9□□□□□ -0.98
TOP3A-208ENST00000542570 BMPERQ8N8U9 685 aa8.9□□□□□ -0.98
TOP3A-208ENST00000542570 SNAPC3Q92966 411 aa8.9□□□□□ -0.98
TOP3A-208ENST00000542570 APOBEC3DQ96AK3 386 aaPredicted RBP8.9□□□□□ -0.98
TOP3A-208ENST00000542570 LRRC46Q96FV0 321 aa8.9□□□□□ -0.98
TOP3A-208ENST00000542570 PFDN2Q9UHV9 154 aa8.9□□□□□ -0.98
TOP3A-208ENST00000542570 PPP1R3CQ9UQK1 317 aa8.9□□□□□ -0.98
TOP3A-208ENST00000542570 LAMA1P25391 3075 aa8.9□□□□□ -0.99
TOP3A-208ENST00000542570 FCGR2CP31995 323 aa8.9□□□□□ -0.99
TOP3A-208ENST00000542570 DLX5P56178 289 aa8.9□□□□□ -0.99
TOP3A-208ENST00000542570 PLA2G7Q13093 441 aa8.9□□□□□ -0.99
TOP3A-208ENST00000542570 ZNF718Q3SXZ3 478 aa8.9□□□□□ -0.99
TOP3A-208ENST00000542570 CATSPERDQ86XM0 798 aa8.9□□□□□ -0.99
TOP3A-208ENST00000542570 TPRX1Q8N7U7 411 aa8.9□□□□□ -0.99
TOP3A-208ENST00000542570 SCCPDHQ8NBX0 429 aa8.9□□□□□ -0.99
TOP3A-208ENST00000542570 ABHD17AQ96GS6 310 aa8.9□□□□□ -0.99
TOP3A-208ENST00000542570 OR2H1Q9GZK4 316 aa8.9□□□□□ -0.99
TOP3A-208ENST00000542570 WASF3Q9UPY6 502 aa8.9□□□□□ -0.99
TOP3A-208ENST00000542570 NAP1L6A6NFF2 107 aa8.89□□□□□ -0.99
TOP3A-208ENST00000542570 CLPSP04118 112 aa8.89□□□□□ -0.99
TOP3A-208ENST00000542570 RPS16P62249 146 aaKnown RBP8.89□□□□□ -0.99
TOP3A-208ENST00000542570 ZNF92Q03936 586 aa8.89□□□□□ -0.99
TOP3A-208ENST00000542570 ZNF616Q08AN1 781 aa8.89□□□□□ -0.99
TOP3A-208ENST00000542570 PIGYQ3MUY2 71 aa8.89□□□□□ -0.99
TOP3A-208ENST00000542570 PHYHD1Q5SRE7 291 aa8.89□□□□□ -0.99
TOP3A-208ENST00000542570 CCL17Q92583 94 aa8.89□□□□□ -0.99
TOP3A-208ENST00000542570 TREM1Q9NP99 234 aa8.89□□□□□ -0.99
TOP3A-208ENST00000542570 GFOD1Q9NXC2 390 aa8.89□□□□□ -0.99
TOP3A-208ENST00000542570 FOXJ3Q9UPW0 622 aa8.89□□□□□ -0.99
TOP3A-208ENST00000542570 V9GYH0 126 aa8.89□□□□□ -0.99
TOP3A-208ENST00000542570 ANKRD33BA6NCL7 494 aa8.89□□□□□ -0.99
TOP3A-208ENST00000542570 CD300LBA8K4G0 201 aa8.89□□□□□ -0.99
TOP3A-208ENST00000542570 XRCC3O43542 346 aa8.89□□□□□ -0.99
TOP3A-208ENST00000542570 SCGNO76038 276 aa8.89□□□□□ -0.99
TOP3A-208ENST00000542570 CHRM2P08172 466 aa8.89□□□□□ -0.99
TOP3A-208ENST00000542570 OR5H8P0DN80 308 aa8.89□□□□□ -0.99
TOP3A-208ENST00000542570 ADRA2CP18825 462 aa8.89□□□□□ -0.99
TOP3A-208ENST00000542570 ERP29P30040 261 aaKnown RBP8.89□□□□□ -0.99
TOP3A-208ENST00000542570 ETV6P41212 452 aa8.89□□□□□ -0.99
TOP3A-208ENST00000542570 GNMTQ14749 295 aa8.89□□□□□ -0.99
TOP3A-208ENST00000542570 MEF2DQ14814 521 aa8.89□□□□□ -0.99
TOP3A-208ENST00000542570 ZNF169Q14929 603 aaPredicted RBP8.89□□□□□ -0.99
TOP3A-208ENST00000542570 TMEM217Q8N7C4 229 aa8.89□□□□□ -0.99
TOP3A-208ENST00000542570 SMIM4Q8WVI0 70 aa8.89□□□□□ -0.99
TOP3A-208ENST00000542570 HYLS1Q96M11 299 aa8.89□□□□□ -0.99
TOP3A-208ENST00000542570 SNX18Q96RF0 628 aa8.89□□□□□ -0.99
TOP3A-208ENST00000542570 SLC26A1Q9H2B4 701 aa8.89□□□□□ -0.99
TOP3A-208ENST00000542570 RANBP3Q9H6Z4 567 aaPredicted RBP8.89□□□□□ -0.99
TOP3A-208ENST00000542570 CYB5R1Q9UHQ9 305 aa8.89□□□□□ -0.99
TOP3A-208ENST00000542570 GEMIN2O14893 280 aaKnown RBP8.89□□□□□ -0.99
TOP3A-208ENST00000542570 ZNF728P0DKX0 622 aa8.89□□□□□ -0.99
TOP3A-208ENST00000542570 GSK3AP49840 483 aa8.89□□□□□ -0.99
TOP3A-208ENST00000542570 TAGLNQ01995 201 aaKnown RBP8.89□□□□□ -0.99
TOP3A-208ENST00000542570 ASAH1Q13510 395 aa8.89□□□□□ -0.99
TOP3A-208ENST00000542570 NDUFA5Q16718 116 aa8.89□□□□□ -0.99
TOP3A-208ENST00000542570 MOGAT2Q3SYC2 334 aa8.89□□□□□ -0.99
TOP3A-208ENST00000542570 OSR2Q8N2R0 312 aa8.89□□□□□ -0.99
TOP3A-208ENST00000542570 ZNF426Q9BUY5 554 aa8.89□□□□□ -0.99
TOP3A-208ENST00000542570 ZNF391Q9UJN7 358 aa8.89□□□□□ -0.99
TOP3A-208ENST00000542570 SF3B6Q9Y3B4 125 aaKnown RBP8.89□□□□□ -0.99
TOP3A-208ENST00000542570 PLA2G10O15496 165 aa8.88□□□□□ -0.99
TOP3A-208ENST00000542570 XRCC2O43543 280 aa8.88□□□□□ -0.99
TOP3A-208ENST00000542570 IFNA7P01567 189 aa8.88□□□□□ -0.99
TOP3A-208ENST00000542570 ZNF883P0CG24 379 aa8.88□□□□□ -0.99
TOP3A-208ENST00000542570 PVALBP20472 110 aaPredicted RBP8.88□□□□□ -0.99
TOP3A-208ENST00000542570 ARHGDIBP52566 201 aa8.88□□□□□ -0.99
TOP3A-208ENST00000542570 NCCRP1Q6ZVX7 275 aaPredicted RBP8.88□□□□□ -0.99
TOP3A-208ENST00000542570 ZNF610Q8N9Z0 462 aa8.88□□□□□ -0.99
TOP3A-208ENST00000542570 OR1S1Q8NH92 325 aa8.88□□□□□ -0.99
TOP3A-208ENST00000542570 MOB1AQ9H8S9 216 aa8.88□□□□□ -0.99
TOP3A-208ENST00000542570 MRPS18AQ9NVS2 196 aaKnown RBP8.88□□□□□ -0.99
TOP3A-208ENST00000542570 KLK13Q9UKR3 277 aa8.88□□□□□ -0.99
TOP3A-208ENST00000542570 ANKHD1Q8IWZ3 2542 aaKnown RBP8.88□□□□□ -0.99
TOP3A-208ENST00000542570 IGHV3-43A0A0B4J1X8 118 aa8.88□□□□□ -0.99
TOP3A-208ENST00000542570 RP2O75695 350 aa8.88□□□□□ -0.99
TOP3A-208ENST00000542570 IGHV3-43DP0DP04 118 aa8.88□□□□□ -0.99
TOP3A-208ENST00000542570 ARL6IP1Q15041 203 aa8.88□□□□□ -0.99
TOP3A-208ENST00000542570 FBXW9Q5XUX1 488 aa8.88□□□□□ -0.99
TOP3A-208ENST00000542570 RGS7BPQ6MZT1 257 aaPredicted RBP8.88□□□□□ -0.99
TOP3A-208ENST00000542570 OR4D10Q8NGI6 311 aa8.88□□□□□ -0.99
TOP3A-208ENST00000542570 ZNF519Q8TB69 540 aa8.88□□□□□ -0.99
TOP3A-208ENST00000542570 CA5BP1Q8WTZ4 195 aa8.88□□□□□ -0.99
TOP3A-208ENST00000542570 UPRTQ96BW1 309 aa8.88□□□□□ -0.99
TOP3A-208ENST00000542570 GPHA2Q96T91 129 aa8.88□□□□□ -0.99
Retrieved 100 of 20,778 RNA–protein pairs in 31.1 ms