RNA–Protein interactions for RNA: ENST00000542407.5

PDLIM5-221, Transcript of PDZ and LIM domain 5, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene PDLIM5, Length 2,979 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM5-221ENST00000542407 OR2F1Q13607 317 aa7.08□□□□□ -1.28
PDLIM5-221ENST00000542407 HAGHQ16775 308 aa7.08□□□□□ -1.28
PDLIM5-221ENST00000542407 OR10K2Q6IF99 312 aa7.08□□□□□ -1.28
PDLIM5-221ENST00000542407 ZNF573Q86YE8 665 aa7.08□□□□□ -1.28
PDLIM5-221ENST00000542407 GLB1L2Q8IW92 636 aa7.08□□□□□ -1.28
PDLIM5-221ENST00000542407 C15orf54Q8N8G6 183 aa7.08□□□□□ -1.28
PDLIM5-221ENST00000542407 TMEM105Q8N8V8 129 aa7.08□□□□□ -1.28
PDLIM5-221ENST00000542407 ZNF441Q8N8Z8 693 aa7.08□□□□□ -1.28
PDLIM5-221ENST00000542407 OR5R1Q8NH85 324 aa7.08□□□□□ -1.28
PDLIM5-221ENST00000542407 MITD1Q8WV92 249 aa7.08□□□□□ -1.28
PDLIM5-221ENST00000542407 NUDT9Q9BW91 350 aa7.08□□□□□ -1.28
PDLIM5-221ENST00000542407 APMAPQ9HDC9 416 aa7.08□□□□□ -1.28
PDLIM5-221ENST00000542407 SHPKQ9UHJ6 478 aa7.08□□□□□ -1.28
PDLIM5-221ENST00000542407 COL27A1Q8IZC6 1860 aaPredicted RBP7.08□□□□□ -1.28
PDLIM5-221ENST00000542407 CPED1A4D0V7 1026 aa7.08□□□□□ -1.28
PDLIM5-221ENST00000542407 SERINC4A6NH21 518 aa7.08□□□□□ -1.28
PDLIM5-221ENST00000542407 UNC119BA6NIH7 251 aa7.08□□□□□ -1.28
PDLIM5-221ENST00000542407 KLRC4-KLRK1H3BQV0 150 aa7.08□□□□□ -1.28
PDLIM5-221ENST00000542407 M0R036 132 aa7.08□□□□□ -1.28
PDLIM5-221ENST00000542407 BHLHE40O14503 412 aa7.08□□□□□ -1.28
PDLIM5-221ENST00000542407 CSN2P05814 226 aa7.08□□□□□ -1.28
PDLIM5-221ENST00000542407 FOXL2P58012 376 aa7.08□□□□□ -1.28
PDLIM5-221ENST00000542407 ZNF85Q03923 595 aa7.08□□□□□ -1.28
PDLIM5-221ENST00000542407 EBPQ15125 230 aaKnown RBP7.08□□□□□ -1.28
PDLIM5-221ENST00000542407 CD226Q15762 336 aa7.08□□□□□ -1.28
PDLIM5-221ENST00000542407 NKAPLQ5M9Q1 402 aa7.08□□□□□ -1.28
PDLIM5-221ENST00000542407 DMKNQ6E0U4 476 aaPredicted RBP7.08□□□□□ -1.28
PDLIM5-221ENST00000542407 C11orf87Q6NUJ2 197 aa7.08□□□□□ -1.28
PDLIM5-221ENST00000542407 KIRREL2Q6UWL6 708 aa7.08□□□□□ -1.28
PDLIM5-221ENST00000542407 ACOT7LQ6ZUV0 252 aa7.08□□□□□ -1.28
PDLIM5-221ENST00000542407 OR2C3Q8N628 320 aa7.08□□□□□ -1.28
PDLIM5-221ENST00000542407 OR10W1Q8NGF6 305 aa7.08□□□□□ -1.28
PDLIM5-221ENST00000542407 OR52L1Q8NGH7 329 aa7.08□□□□□ -1.28
PDLIM5-221ENST00000542407 OR1L6Q8NGR2 347 aa7.08□□□□□ -1.28
PDLIM5-221ENST00000542407 PPP1R1CQ8WVI7 109 aa7.08□□□□□ -1.28
PDLIM5-221ENST00000542407 TMEM234Q8WY98 164 aa7.08□□□□□ -1.28
PDLIM5-221ENST00000542407 TAAR6Q96RI8 345 aa7.08□□□□□ -1.28
PDLIM5-221ENST00000542407 PHB2Q99623 299 aa7.08□□□□□ -1.28
PDLIM5-221ENST00000542407 NRIP2Q9BQI9 281 aa7.08□□□□□ -1.28
PDLIM5-221ENST00000542407 NGBQ9NPG2 151 aa7.08□□□□□ -1.28
PDLIM5-221ENST00000542407 FOXJ2Q9P0K8 574 aa7.08□□□□□ -1.28
PDLIM5-221ENST00000542407 TNFSF18Q9UNG2 199 aa7.08□□□□□ -1.28
PDLIM5-221ENST00000542407 TECTAO75443 2155 aa7.08□□□□□ -1.28
PDLIM5-221ENST00000542407 RP1P56715 2156 aa7.08□□□□□ -1.28
PDLIM5-221ENST00000542407 LOC105378220A0A1B0GUY1 285 aaPredicted RBP7.08□□□□□ -1.28
PDLIM5-221ENST00000542407 TBPP20226 339 aa7.08□□□□□ -1.28
PDLIM5-221ENST00000542407 CASRP41180 1078 aa7.08□□□□□ -1.28
PDLIM5-221ENST00000542407 HERV-K104P63124 156 aa7.08□□□□□ -1.28
PDLIM5-221ENST00000542407 LY6G6FQ5SQ64 297 aa7.08□□□□□ -1.28
PDLIM5-221ENST00000542407 ZNF774Q6NX45 483 aa7.08□□□□□ -1.28
PDLIM5-221ENST00000542407 UNQ9370/PRO34162Q6UXP9 181 aa7.08□□□□□ -1.28
PDLIM5-221ENST00000542407 THSD4Q6ZMP0 1018 aa7.08□□□□□ -1.28
PDLIM5-221ENST00000542407 EID2Q8N6I1 236 aa7.08□□□□□ -1.28
PDLIM5-221ENST00000542407 PLPP5Q8NEB5 264 aa7.08□□□□□ -1.28
PDLIM5-221ENST00000542407 RGP1Q92546 391 aaPredicted RBP7.08□□□□□ -1.28
PDLIM5-221ENST00000542407 ZNF524Q96C55 264 aa7.08□□□□□ -1.28
PDLIM5-221ENST00000542407 PHYHIPLQ96FC7 376 aa7.08□□□□□ -1.28
PDLIM5-221ENST00000542407 UTP23Q9BRU9 249 aaKnown RBP7.08□□□□□ -1.28
PDLIM5-221ENST00000542407 SELENOIQ9C0D9 397 aa7.08□□□□□ -1.28
PDLIM5-221ENST00000542407 OR8D2Q9GZM6 311 aa7.08□□□□□ -1.28
PDLIM5-221ENST00000542407 OR52D1Q9H346 318 aa7.08□□□□□ -1.28
PDLIM5-221ENST00000542407 RHOFQ9HBH0 211 aa7.08□□□□□ -1.28
PDLIM5-221ENST00000542407 TMEM27Q9HBJ8 222 aa7.08□□□□□ -1.28
PDLIM5-221ENST00000542407 OR2S2Q9NQN1 319 aa7.08□□□□□ -1.28
PDLIM5-221ENST00000542407 OR5V1Q9UGF6 321 aa7.08□□□□□ -1.28
PDLIM5-221ENST00000542407 SRPK3Q9UPE1 567 aa7.08□□□□□ -1.28
PDLIM5-221ENST00000542407 SIGLEC7Q9Y286 467 aa7.08□□□□□ -1.28
PDLIM5-221ENST00000542407 SLC35A3Q9Y2D2 325 aa7.08□□□□□ -1.28
PDLIM5-221ENST00000542407 ZFP30Q9Y2G7 519 aa7.08□□□□□ -1.28
PDLIM5-221ENST00000542407 RNF222A6NCQ9 220 aa7.07□□□□□ -1.28
PDLIM5-221ENST00000542407 EEF1E1-BLOC1S5C9J1V9 151 aa7.07□□□□□ -1.28
PDLIM5-221ENST00000542407 SCDO00767 359 aa7.07□□□□□ -1.28
PDLIM5-221ENST00000542407 PHOX2AO14813 284 aa7.07□□□□□ -1.28
PDLIM5-221ENST00000542407 CD3DP04234 171 aa7.07□□□□□ -1.28
PDLIM5-221ENST00000542407 CFIP05156 583 aa7.07□□□□□ -1.28
PDLIM5-221ENST00000542407 IRF2P14316 349 aa7.07□□□□□ -1.28
PDLIM5-221ENST00000542407 DPP4P27487 766 aa7.07□□□□□ -1.28
PDLIM5-221ENST00000542407 CD34P28906 385 aa7.07□□□□□ -1.28
PDLIM5-221ENST00000542407 CD80P33681 288 aa7.07□□□□□ -1.28
PDLIM5-221ENST00000542407 PMELP40967 661 aa7.07□□□□□ -1.28
PDLIM5-221ENST00000542407 SOX2P48431 317 aa7.07□□□□□ -1.28
PDLIM5-221ENST00000542407 PWWP2BQ6NUJ5 590 aa7.07□□□□□ -1.28
PDLIM5-221ENST00000542407 ZNF529Q6P280 563 aa7.07□□□□□ -1.28
PDLIM5-221ENST00000542407 LYG1Q8N1E2 194 aa7.07□□□□□ -1.28
PDLIM5-221ENST00000542407 FAM24BQ8N5W8 94 aa7.07□□□□□ -1.28
PDLIM5-221ENST00000542407 RNF141Q8WVD5 230 aa7.07□□□□□ -1.28
PDLIM5-221ENST00000542407 BPIFA2Q96DR5 249 aa7.07□□□□□ -1.28
PDLIM5-221ENST00000542407 ZMYND19Q96E35 227 aaPredicted RBP7.07□□□□□ -1.28
PDLIM5-221ENST00000542407 AKR1E2Q96JD6 320 aa7.07□□□□□ -1.28
PDLIM5-221ENST00000542407 OR8B4Q96RC9 309 aa7.07□□□□□ -1.28
PDLIM5-221ENST00000542407 RTN4RQ9BZR6 473 aa7.07□□□□□ -1.28
PDLIM5-221ENST00000542407 WDFY3Q8IZQ1 3526 aa7.07□□□□□ -1.28
PDLIM5-221ENST00000542407 TRAV34A0A0B4J273 112 aa7.07□□□□□ -1.28
PDLIM5-221ENST00000542407 MT-ND4LP03901 98 aa7.07□□□□□ -1.28
PDLIM5-221ENST00000542407 JMJD7P0C870 316 aa7.07□□□□□ -1.28
PDLIM5-221ENST00000542407 NME2P22392 152 aa7.07□□□□□ -1.28
PDLIM5-221ENST00000542407 PJVKQ0ZLH3 352 aa7.07□□□□□ -1.28
PDLIM5-221ENST00000542407 OR5I1Q13606 314 aa7.07□□□□□ -1.28
PDLIM5-221ENST00000542407 NSDHLQ15738 373 aa7.07□□□□□ -1.28
PDLIM5-221ENST00000542407 SMIM21Q3B7S5 101 aa7.07□□□□□ -1.28
Retrieved 100 of 20,778 RNA–protein pairs in 39.5 ms