RNA–Protein interactions for RNA: ENST00000541578.5

SNHG1-217, Transcript of small nucleolar RNA host gene 1, humanhuman

TSL 3 BASIC

Gene SNHG1, Length 588 nt, Biotype lincRNA, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNHG1-217ENST00000541578 MRAPQ8TCY5 172 aa3.07□□□□□ -1.92
SNHG1-217ENST00000541578 LKAAEAR1Q8TD35 194 aa3.07□□□□□ -1.92
SNHG1-217ENST00000541578 MCOLN3Q8TDD5 553 aa3.07□□□□□ -1.92
SNHG1-217ENST00000541578 TMEM230Q96A57 120 aa3.07□□□□□ -1.92
SNHG1-217ENST00000541578 RPUSD4Q96CM3 377 aaKnown RBP3.07□□□□□ -1.92
SNHG1-217ENST00000541578 TMEM101Q96IK0 257 aa3.07□□□□□ -1.92
SNHG1-217ENST00000541578 SELENOSQ9BQE4 189 aa3.07□□□□□ -1.92
SNHG1-217ENST00000541578 NRIP2Q9BQI9 281 aa3.07□□□□□ -1.92
SNHG1-217ENST00000541578 CALN1Q9BXU9 219 aa3.07□□□□□ -1.92
SNHG1-217ENST00000541578 PLA2G2FQ9BZM2 168 aa3.07□□□□□ -1.92
SNHG1-217ENST00000541578 OR11A1Q9GZK7 315 aa3.07□□□□□ -1.92
SNHG1-217ENST00000541578 TMEM38AQ9H6F2 299 aa3.07□□□□□ -1.92
SNHG1-217ENST00000541578 INIPQ9NRY2 104 aa3.07□□□□□ -1.92
SNHG1-217ENST00000541578 ARMC1Q9NVT9 282 aa3.07□□□□□ -1.92
SNHG1-217ENST00000541578 PAQR5Q9NXK6 330 aaPredicted RBP3.07□□□□□ -1.92
SNHG1-217ENST00000541578 STOX2Q9P2F5 926 aaPredicted RBP3.07□□□□□ -1.92
SNHG1-217ENST00000541578 ZNF629Q9UEG4 869 aaPredicted RBP3.07□□□□□ -1.92
SNHG1-217ENST00000541578 Q9UF83 564 aa3.07□□□□□ -1.92
SNHG1-217ENST00000541578 HEBP2Q9Y5Z4 205 aa3.07□□□□□ -1.92
SNHG1-217ENST00000541578 ZNF462Q96JM2 2506 aa3.07□□□□□ -1.92
SNHG1-217ENST00000541578 TRAV39A0A0B4J263 110 aa3.06□□□□□ -1.92
SNHG1-217ENST00000541578 IGKV6-21A0A0C4DH24 114 aa3.06□□□□□ -1.92
SNHG1-217ENST00000541578 OR6C74A6NCV1 312 aa3.06□□□□□ -1.92
SNHG1-217ENST00000541578 SMKR1H3BMG3 65 aa3.06□□□□□ -1.92
SNHG1-217ENST00000541578 RAD51BO15315 384 aa3.06□□□□□ -1.92
SNHG1-217ENST00000541578 MPDU1O75352 247 aa3.06□□□□□ -1.92
SNHG1-217ENST00000541578 TNFSF13O75888 250 aa3.06□□□□□ -1.92
SNHG1-217ENST00000541578 ETHE1O95571 254 aa3.06□□□□□ -1.92
SNHG1-217ENST00000541578 RAB3DO95716 219 aa3.06□□□□□ -1.92
SNHG1-217ENST00000541578 IFNA14P01570 189 aa3.06□□□□□ -1.92
SNHG1-217ENST00000541578 HPNP05981 417 aa3.06□□□□□ -1.92
SNHG1-217ENST00000541578 KRT7P08729 469 aa3.06□□□□□ -1.92
SNHG1-217ENST00000541578 CHTF8P0CG12 524 aa3.06□□□□□ -1.92
SNHG1-217ENST00000541578 HLA-EP13747 358 aa3.06□□□□□ -1.92
SNHG1-217ENST00000541578 CNR1P21554 472 aa3.06□□□□□ -1.92
SNHG1-217ENST00000541578 WARSP23381 471 aaKnown RBP3.06□□□□□ -1.92
SNHG1-217ENST00000541578 HTR1EP28566 365 aa3.06□□□□□ -1.92
SNHG1-217ENST00000541578 STX17P56962 302 aa3.06□□□□□ -1.92
SNHG1-217ENST00000541578 MYL6P60660 151 aa3.06□□□□□ -1.92
SNHG1-217ENST00000541578 TSPAN5P62079 268 aa3.06□□□□□ -1.92
SNHG1-217ENST00000541578 RPS15AP62244 130 aaKnown RBP3.06□□□□□ -1.92
SNHG1-217ENST00000541578 RPS21P63220 83 aaKnown RBP3.06□□□□□ -1.92
SNHG1-217ENST00000541578 ART3Q13508 389 aa3.06□□□□□ -1.92
SNHG1-217ENST00000541578 TFDP2Q14188 446 aa3.06□□□□□ -1.92
SNHG1-217ENST00000541578 TSC22D1Q15714 1073 aa3.06□□□□□ -1.92
SNHG1-217ENST00000541578 MYLKQ15746 1914 aa3.06□□□□□ -1.92
SNHG1-217ENST00000541578 GABRA6Q16445 453 aa3.06□□□□□ -1.92
SNHG1-217ENST00000541578 RGS21Q2M5E4 152 aa3.06□□□□□ -1.92
SNHG1-217ENST00000541578 PTPN20Q4JDL3 420 aa3.06□□□□□ -1.92
SNHG1-217ENST00000541578 VAX1Q5SQQ9 334 aa3.06□□□□□ -1.92
SNHG1-217ENST00000541578 CLVS2Q5SYC1 327 aa3.06□□□□□ -1.92
SNHG1-217ENST00000541578 FREM2Q5SZK8 3169 aa3.06□□□□□ -1.92
SNHG1-217ENST00000541578 TPRG1LQ5T0D9 272 aa3.06□□□□□ -1.92
SNHG1-217ENST00000541578 RSBN1Q5VWQ0 802 aaPredicted RBP3.06□□□□□ -1.92
SNHG1-217ENST00000541578 ABHD13Q7L211 337 aa3.06□□□□□ -1.92
SNHG1-217ENST00000541578 UNC93AQ86WB7 457 aa3.06□□□□□ -1.92
SNHG1-217ENST00000541578 SYCE1Q8N0S2 351 aa3.06□□□□□ -1.92
SNHG1-217ENST00000541578 TSTD1Q8NFU3 115 aa3.06□□□□□ -1.92
SNHG1-217ENST00000541578 OR56A4Q8NGH8 313 aa3.06□□□□□ -1.92
SNHG1-217ENST00000541578 TEX47Q8TBZ9 253 aa3.06□□□□□ -1.92
SNHG1-217ENST00000541578 TCP10LQ8TDR4 215 aa3.06□□□□□ -1.92
SNHG1-217ENST00000541578 C7orf33Q8WU49 177 aa3.06□□□□□ -1.92
SNHG1-217ENST00000541578 ING5Q8WYH8 240 aa3.06□□□□□ -1.92
SNHG1-217ENST00000541578 DHRS9Q9BPW9 319 aa3.06□□□□□ -1.92
SNHG1-217ENST00000541578 OR2AG1Q9H205 316 aa3.06□□□□□ -1.92
SNHG1-217ENST00000541578 SYNDIG1Q9H7V2 258 aa3.06□□□□□ -1.92
SNHG1-217ENST00000541578 FAM49BQ9NUQ9 324 aa3.06□□□□□ -1.92
SNHG1-217ENST00000541578 RMND1Q9NWS8 449 aa3.06□□□□□ -1.92
SNHG1-217ENST00000541578 CLN6Q9NWW5 311 aa3.06□□□□□ -1.92
SNHG1-217ENST00000541578 CLCF1Q9UBD9 225 aa3.06□□□□□ -1.92
SNHG1-217ENST00000541578 CD300AQ9UGN4 299 aa3.06□□□□□ -1.92
SNHG1-217ENST00000541578 ZNF256Q9Y2P7 627 aaPredicted RBP3.06□□□□□ -1.92
SNHG1-217ENST00000541578 RCL1Q9Y2P8 373 aaKnown RBP3.06□□□□□ -1.92
SNHG1-217ENST00000541578 CACNA1EQ15878 2313 aa3.05□□□□□ -1.92
SNHG1-217ENST00000541578 CABIN1Q9Y6J0 2220 aa3.05□□□□□ -1.92
SNHG1-217ENST00000541578 PTPRDP23468 1912 aa3.05□□□□□ -1.92
SNHG1-217ENST00000541578 UNC79Q9P2D8 2635 aa3.05□□□□□ -1.92
SNHG1-217ENST00000541578 IGKV1D-13A0A0B4J2D9 117 aa3.05□□□□□ -1.92
SNHG1-217ENST00000541578 A0A0G2JN53 185 aa3.05□□□□□ -1.92
SNHG1-217ENST00000541578 A0A1B0GVG6 124 aa3.05□□□□□ -1.92
SNHG1-217ENST00000541578 A0A1B0GVI7 797 aa3.05□□□□□ -1.92
SNHG1-217ENST00000541578 SPAARA0A1B0GVQ0 90 aa3.05□□□□□ -1.92
SNHG1-217ENST00000541578 A0A1W2PRF3 423 aa3.05□□□□□ -1.92
SNHG1-217ENST00000541578 A0A1W2PRM7 423 aa3.05□□□□□ -1.92
SNHG1-217ENST00000541578 FAM168BA1KXE4 195 aa3.05□□□□□ -1.92
SNHG1-217ENST00000541578 GJE1A6NN92 205 aa3.05□□□□□ -1.92
SNHG1-217ENST00000541578 FAM166BA8MTA8 275 aa3.05□□□□□ -1.92
SNHG1-217ENST00000541578 CENPBD1B2RD01 187 aa3.05□□□□□ -1.92
SNHG1-217ENST00000541578 TMEM114B3SHH9 223 aa3.05□□□□□ -1.92
SNHG1-217ENST00000541578 K7ERQ8 282 aa3.05□□□□□ -1.92
SNHG1-217ENST00000541578 BCL2L11O43521 198 aa3.05□□□□□ -1.92
SNHG1-217ENST00000541578 GATCO43716 136 aaKnown RBP3.05□□□□□ -1.92
SNHG1-217ENST00000541578 STX10O60499 249 aa3.05□□□□□ -1.92
SNHG1-217ENST00000541578 SRP72O76094 671 aaKnown RBP3.05□□□□□ -1.92
SNHG1-217ENST00000541578 FABP3P05413 133 aa3.05□□□□□ -1.92
SNHG1-217ENST00000541578 RPS17P08708 135 aaKnown RBP3.05□□□□□ -1.92
SNHG1-217ENST00000541578 SNRPAP09012 282 aaKnown RBP3.05□□□□□ -1.92
SNHG1-217ENST00000541578 P0C879 139 aa3.05□□□□□ -1.92
SNHG1-217ENST00000541578 IGKV1-13P0DP09 117 aa3.05□□□□□ -1.92
SNHG1-217ENST00000541578 SYT1P21579 422 aa3.05□□□□□ -1.92
Retrieved 100 of 20,778 RNA–protein pairs in 41.5 ms