RNA–Protein interactions for RNA: ENST00000541351.3

YBX3-211, Transcript of Y-box binding protein 3, humanhuman

TSL 4

Gene YBX3, Length 717 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
YBX3-211ENST00000541351 GTSCR1Q86UQ5 136 aa7.37□□□□□ -1.23
YBX3-211ENST00000541351 ZNF676Q8N7Q3 588 aa7.37□□□□□ -1.23
YBX3-211ENST00000541351 C11orf65Q8NCR3 313 aa7.37□□□□□ -1.23
YBX3-211ENST00000541351 OR1N2Q8NGR9 330 aa7.37□□□□□ -1.23
YBX3-211ENST00000541351 OR51A7Q8NH64 312 aa7.37□□□□□ -1.23
YBX3-211ENST00000541351 ZBTB9Q96C00 473 aa7.37□□□□□ -1.23
YBX3-211ENST00000541351 ZIM2Q9NZV7 527 aa7.37□□□□□ -1.23
YBX3-211ENST00000541351 ACTR3BQ9P1U1 418 aa7.37□□□□□ -1.23
YBX3-211ENST00000541351 ZNF222Q9UK12 451 aa7.37□□□□□ -1.23
YBX3-211ENST00000541351 SESN1Q9Y6P5 492 aa7.37□□□□□ -1.23
YBX3-211ENST00000541351 C12orf77C9JDV5 145 aa7.36□□□□□ -1.23
YBX3-211ENST00000541351 PSMD9O00233 223 aa7.36□□□□□ -1.23
YBX3-211ENST00000541351 EBAG9O00559 213 aa7.36□□□□□ -1.23
YBX3-211ENST00000541351 OR5H8P0DN80 308 aa7.36□□□□□ -1.23
YBX3-211ENST00000541351 JUNBP17275 347 aaPredicted RBP7.36□□□□□ -1.23
YBX3-211ENST00000541351 POLR2JP52435 117 aaKnown RBP7.36□□□□□ -1.23
YBX3-211ENST00000541351 MESTQ5EB52 335 aa7.36□□□□□ -1.23
YBX3-211ENST00000541351 CEMP1Q6PRD7 247 aaPredicted RBP7.36□□□□□ -1.23
YBX3-211ENST00000541351 SMARCD3Q6STE5 483 aa7.36□□□□□ -1.23
YBX3-211ENST00000541351 ACP7Q6ZNF0 438 aa7.36□□□□□ -1.23
YBX3-211ENST00000541351 NAA40Q86UY6 237 aa7.36□□□□□ -1.23
YBX3-211ENST00000541351 THNSL2Q86YJ6 484 aa7.36□□□□□ -1.23
YBX3-211ENST00000541351 NKAIN4Q8IVV8 208 aa7.36□□□□□ -1.23
YBX3-211ENST00000541351 ZDHHC23Q8IYP9 409 aa7.36□□□□□ -1.23
YBX3-211ENST00000541351 ZNF781Q8N8C0 355 aa7.36□□□□□ -1.23
YBX3-211ENST00000541351 LRRC75AQ8NAA5 344 aa7.36□□□□□ -1.23
YBX3-211ENST00000541351 GTF2H4Q92759 462 aa7.36□□□□□ -1.23
YBX3-211ENST00000541351 RNF166Q96A37 237 aaPredicted RBP7.36□□□□□ -1.23
YBX3-211ENST00000541351 LRGUKQ96M69 825 aa7.36□□□□□ -1.23
YBX3-211ENST00000541351 ELOVL1Q9BW60 279 aa7.36□□□□□ -1.23
YBX3-211ENST00000541351 OR51J1Q9H342 316 aa7.36□□□□□ -1.23
YBX3-211ENST00000541351 VSX1Q9NZR4 365 aaPredicted RBP7.36□□□□□ -1.23
YBX3-211ENST00000541351 RIMS3Q9UJD0 308 aa7.36□□□□□ -1.23
YBX3-211ENST00000541351 TRAV27A0A087WT01 109 aa7.35□□□□□ -1.23
YBX3-211ENST00000541351 hADV38S2A0JD32 116 aa7.35□□□□□ -1.23
YBX3-211ENST00000541351 TRPC5OSA6NMA1 111 aa7.35□□□□□ -1.23
YBX3-211ENST00000541351 EFCAB9A8MZ26 197 aa7.35□□□□□ -1.23
YBX3-211ENST00000541351 M0QX08 132 aa7.35□□□□□ -1.23
YBX3-211ENST00000541351 APOC1P02654 83 aa7.35□□□□□ -1.23
YBX3-211ENST00000541351 TROVE2P10155 538 aaKnown RBP eCLIP7.35□□□□□ -1.23
YBX3-211ENST00000541351 PIPP12273 146 aaPredicted RBP7.35□□□□□ -1.23
YBX3-211ENST00000541351 VDAC1P21796 283 aa7.35□□□□□ -1.23
YBX3-211ENST00000541351 MNAT1P51948 309 aa7.35□□□□□ -1.23
YBX3-211ENST00000541351 DLX6P56179 175 aa7.35□□□□□ -1.23
YBX3-211ENST00000541351 ESRRGP62508 458 aa7.35□□□□□ -1.23
YBX3-211ENST00000541351 PITPNAQ00169 270 aa7.35□□□□□ -1.23
YBX3-211ENST00000541351 RUNX1Q01196 453 aa7.35□□□□□ -1.23
YBX3-211ENST00000541351 BDH1Q02338 343 aa7.35□□□□□ -1.23
YBX3-211ENST00000541351 ST3GAL3Q11203 375 aa7.35□□□□□ -1.23
YBX3-211ENST00000541351 PMS2P11Q13670 270 aa7.35□□□□□ -1.23
YBX3-211ENST00000541351 TAF13Q15543 124 aa7.35□□□□□ -1.23
YBX3-211ENST00000541351 SLC18B1Q6NT16 456 aa7.35□□□□□ -1.23
YBX3-211ENST00000541351 GDPD3Q7L5L3 318 aa7.35□□□□□ -1.23
YBX3-211ENST00000541351 MAVSQ7Z434 540 aa7.35□□□□□ -1.23
YBX3-211ENST00000541351 Q8N1Y9 231 aa7.35□□□□□ -1.23
YBX3-211ENST00000541351 RPL3LQ92901 407 aaKnown RBP7.35□□□□□ -1.23
YBX3-211ENST00000541351 SPSB4Q96A44 273 aa7.35□□□□□ -1.23
YBX3-211ENST00000541351 HRASLS5Q96KN8 279 aa7.35□□□□□ -1.23
YBX3-211ENST00000541351 UBE2E2Q96LR5 201 aa7.35□□□□□ -1.23
YBX3-211ENST00000541351 Q96M85 177 aa7.35□□□□□ -1.23
YBX3-211ENST00000541351 NRIP2Q9BQI9 281 aa7.35□□□□□ -1.23
YBX3-211ENST00000541351 TMED9Q9BVK6 235 aa7.35□□□□□ -1.23
YBX3-211ENST00000541351 PAIP1Q9H074 479 aaKnown RBP7.35□□□□□ -1.23
YBX3-211ENST00000541351 NUAK2Q9H093 628 aa7.35□□□□□ -1.23
YBX3-211ENST00000541351 NSRP1Q9H0G5 558 aaKnown RBP7.35□□□□□ -1.23
YBX3-211ENST00000541351 TMEM133Q9H2Q1 129 aa7.35□□□□□ -1.23
YBX3-211ENST00000541351 HIPK2Q9H2X6 1198 aa7.35□□□□□ -1.23
YBX3-211ENST00000541351 GLS2Q9UI32 602 aa7.35□□□□□ -1.23
YBX3-211ENST00000541351 LINC00527Q9UJ94 153 aa7.35□□□□□ -1.23
YBX3-211ENST00000541351 HHLA2Q9UM44 414 aa7.35□□□□□ -1.23
YBX3-211ENST00000541351 CEPT1Q9Y6K0 416 aa7.35□□□□□ -1.23
YBX3-211ENST00000541351 RFPL4AA6NLU0 287 aa7.34□□□□□ -1.23
YBX3-211ENST00000541351 RFPL4AL1F8VTS6 287 aa7.34□□□□□ -1.23
YBX3-211ENST00000541351 TBX1O43435 398 aa7.34□□□□□ -1.23
YBX3-211ENST00000541351 MTRF1O75570 445 aaKnown RBP7.34□□□□□ -1.23
YBX3-211ENST00000541351 CNIH1O95406 144 aa7.34□□□□□ -1.23
YBX3-211ENST00000541351 HLA-DQA2P01906 255 aa7.34□□□□□ -1.23
YBX3-211ENST00000541351 TFF1P04155 84 aa7.34□□□□□ -1.23
YBX3-211ENST00000541351 TK1P04183 234 aa7.34□□□□□ -1.23
YBX3-211ENST00000541351 BPGMP07738 259 aa7.34□□□□□ -1.23
YBX3-211ENST00000541351 ZNF823P16415 610 aa7.34□□□□□ -1.23
YBX3-211ENST00000541351 PRDX2P32119 198 aa7.34□□□□□ -1.23
YBX3-211ENST00000541351 ABCE1P61221 599 aaKnown RBP7.34□□□□□ -1.23
YBX3-211ENST00000541351 MEF2CQ06413 473 aaPredicted RBP7.34□□□□□ -1.23
YBX3-211ENST00000541351 HES1Q14469 280 aa7.34□□□□□ -1.23
YBX3-211ENST00000541351 MEP1BQ16820 701 aa7.34□□□□□ -1.23
YBX3-211ENST00000541351 CYP51A1Q16850 503 aa7.34□□□□□ -1.23
YBX3-211ENST00000541351 FAM76BQ5HYJ3 339 aa7.34□□□□□ -1.23
YBX3-211ENST00000541351 OTPQ5XKR4 325 aa7.34□□□□□ -1.23
YBX3-211ENST00000541351 SLC16A9Q7RTY1 509 aa7.34□□□□□ -1.23
YBX3-211ENST00000541351 ANKRD13BQ86YJ7 626 aa7.34□□□□□ -1.23
YBX3-211ENST00000541351 RBM45Q8IUH3 476 aaKnown RBP7.34□□□□□ -1.23
YBX3-211ENST00000541351 C5orf56Q8N8D9 126 aa7.34□□□□□ -1.23
YBX3-211ENST00000541351 OR4P4Q8NGL7 312 aa7.34□□□□□ -1.23
YBX3-211ENST00000541351 DCUN1D4Q92564 292 aa7.34□□□□□ -1.23
YBX3-211ENST00000541351 RNF170Q96K19 258 aa7.34□□□□□ -1.23
YBX3-211ENST00000541351 CHCHD6Q9BRQ6 235 aa7.34□□□□□ -1.23
YBX3-211ENST00000541351 COPS4Q9BT78 406 aa7.34□□□□□ -1.23
YBX3-211ENST00000541351 CYB5R1Q9UHQ9 305 aa7.34□□□□□ -1.23
YBX3-211ENST00000541351 BAG5Q9UL15 447 aa7.34□□□□□ -1.23
Retrieved 100 of 20,778 RNA–protein pairs in 30.6 ms