RNA–Protein interactions for RNA: ENST00000539584.5

UBE3B-209, Transcript of ubiquitin protein ligase E3B, humanhuman

TSL 5

Gene UBE3B, Length 2,006 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBE3B-209ENST00000539584 ACY1Q03154 408 aa11.64□□□□□ -0.55
UBE3B-209ENST00000539584 RNF144BQ7Z419 303 aa11.64□□□□□ -0.55
UBE3B-209ENST00000539584 BHLHE23Q8NDY6 225 aa11.64□□□□□ -0.55
UBE3B-209ENST00000539584 RLN3Q8WXF3 142 aa11.64□□□□□ -0.55
UBE3B-209ENST00000539584 TAAR9Q96RI9 348 aa11.64□□□□□ -0.55
UBE3B-209ENST00000539584 USB1Q9BQ65 265 aaKnown RBP11.64□□□□□ -0.55
UBE3B-209ENST00000539584 SUCNR1Q9BXA5 334 aa11.64□□□□□ -0.55
UBE3B-209ENST00000539584 METTL7AQ9H8H3 244 aa11.64□□□□□ -0.55
UBE3B-209ENST00000539584 LUZP4Q9P127 313 aa11.64□□□□□ -0.55
UBE3B-209ENST00000539584 AMDHD2Q9Y303 409 aa11.64□□□□□ -0.55
UBE3B-209ENST00000539584 PCNX3Q9H6A9 2034 aa11.64□□□□□ -0.55
UBE3B-209ENST00000539584 A0A087WZY1 265 aa11.63□□□□□ -0.55
UBE3B-209ENST00000539584 TRBV11-1A0A0K0K1C0 115 aa11.63□□□□□ -0.55
UBE3B-209ENST00000539584 TSPAN15O95858 294 aa11.63□□□□□ -0.55
UBE3B-209ENST00000539584 S100A9P06702 114 aaKnown RBP11.63□□□□□ -0.55
UBE3B-209ENST00000539584 DANCRP0C864 163 aa11.63□□□□□ -0.55
UBE3B-209ENST00000539584 NFYBP25208 207 aa11.63□□□□□ -0.55
UBE3B-209ENST00000539584 OTX1P32242 354 aaPredicted RBP11.63□□□□□ -0.55
UBE3B-209ENST00000539584 PTGDSP41222 190 aa11.63□□□□□ -0.55
UBE3B-209ENST00000539584 HIST1H3AP68431 136 aa11.63□□□□□ -0.55
UBE3B-209ENST00000539584 HIST2H3PS2Q5TEC6 136 aa11.63□□□□□ -0.55
UBE3B-209ENST00000539584 HIST2H3AQ71DI3 136 aa11.63□□□□□ -0.55
UBE3B-209ENST00000539584 SLC38A9Q8NBW4 561 aa11.63□□□□□ -0.55
UBE3B-209ENST00000539584 OR2M3Q8NG83 312 aa11.63□□□□□ -0.55
UBE3B-209ENST00000539584 RELTQ969Z4 430 aa11.63□□□□□ -0.55
UBE3B-209ENST00000539584 SPSB1Q96BD6 273 aa11.63□□□□□ -0.55
UBE3B-209ENST00000539584 INTS12Q96CB8 462 aaKnown RBP11.63□□□□□ -0.55
UBE3B-209ENST00000539584 ZNF2Q9BSG1 426 aaPredicted RBP11.63□□□□□ -0.55
UBE3B-209ENST00000539584 SOX7Q9BT81 388 aa11.63□□□□□ -0.55
UBE3B-209ENST00000539584 PLEKHJ1Q9NW61 149 aa11.63□□□□□ -0.55
UBE3B-209ENST00000539584 MYOTQ9UBF9 498 aa11.63□□□□□ -0.55
UBE3B-209ENST00000539584 ANXA10Q9UJ72 324 aa11.63□□□□□ -0.55
UBE3B-209ENST00000539584 PADI1Q9ULC6 663 aa11.63□□□□□ -0.55
UBE3B-209ENST00000539584 IGHV3-20A0A0C4DH32 117 aa11.62□□□□□ -0.55
UBE3B-209ENST00000539584 ONECUT2O95948 504 aa11.62□□□□□ -0.55
UBE3B-209ENST00000539584 SNCAP37840 140 aa11.62□□□□□ -0.55
UBE3B-209ENST00000539584 KCNJ3P48549 501 aa11.62□□□□□ -0.55
UBE3B-209ENST00000539584 SPEM2Q0P670 501 aa11.62□□□□□ -0.55
UBE3B-209ENST00000539584 GGNBP1Q5YKI7 109 aa11.62□□□□□ -0.55
UBE3B-209ENST00000539584 CRIP3Q6Q6R5 217 aa11.62□□□□□ -0.55
UBE3B-209ENST00000539584 PLXDC2Q6UX71 529 aa11.62□□□□□ -0.55
UBE3B-209ENST00000539584 C16orf47Q6ZP98 133 aaPredicted RBP11.62□□□□□ -0.55
UBE3B-209ENST00000539584 LFNGQ8NES3 379 aa11.62□□□□□ -0.55
UBE3B-209ENST00000539584 Q96M66 194 aa11.62□□□□□ -0.55
UBE3B-209ENST00000539584 DUSP15Q9H1R2 295 aaPredicted RBP11.62□□□□□ -0.55
UBE3B-209ENST00000539584 ZNF701Q9NV72 531 aaPredicted RBP11.62□□□□□ -0.55
UBE3B-209ENST00000539584 NECAP2Q9NVZ3 263 aa11.62□□□□□ -0.55
UBE3B-209ENST00000539584 ATXN7L1Q9ULK2 861 aaPredicted RBP11.62□□□□□ -0.55
UBE3B-209ENST00000539584 A0A1B0GW64 132 aa11.62□□□□□ -0.55
UBE3B-209ENST00000539584 C5orf52A6NGY3 159 aa11.62□□□□□ -0.55
UBE3B-209ENST00000539584 UBE2CO00762 179 aa11.62□□□□□ -0.55
UBE3B-209ENST00000539584 GPR137BO60478 399 aa11.62□□□□□ -0.55
UBE3B-209ENST00000539584 EIF1BO60739 113 aaKnown RBP11.62□□□□□ -0.55
UBE3B-209ENST00000539584 S100A6P06703 90 aa11.62□□□□□ -0.55
UBE3B-209ENST00000539584 FCGR2AP12318 317 aa11.62□□□□□ -0.55
UBE3B-209ENST00000539584 SERPINA2P20848 420 aa11.62□□□□□ -0.55
UBE3B-209ENST00000539584 P2RY1P47900 373 aa11.62□□□□□ -0.55
UBE3B-209ENST00000539584 HABP2Q14520 560 aaPredicted RBP11.62□□□□□ -0.55
UBE3B-209ENST00000539584 IL13RA2Q14627 380 aa11.62□□□□□ -0.55
UBE3B-209ENST00000539584 RHEBQ15382 184 aa11.62□□□□□ -0.55
UBE3B-209ENST00000539584 UBE2V2Q15819 145 aa11.62□□□□□ -0.55
UBE3B-209ENST00000539584 NKAIN1Q4KMZ8 207 aa11.62□□□□□ -0.55
UBE3B-209ENST00000539584 OR2A2Q6IF42 318 aa11.62□□□□□ -0.55
UBE3B-209ENST00000539584 RPUSD3Q6P087 351 aaKnown RBP11.62□□□□□ -0.55
UBE3B-209ENST00000539584 FADS6Q8N9I5 356 aa11.62□□□□□ -0.55
UBE3B-209ENST00000539584 POM121Q96HA1 1249 aa11.62□□□□□ -0.55
UBE3B-209ENST00000539584 SYT3Q9BQG1 590 aa11.62□□□□□ -0.55
UBE3B-209ENST00000539584 GINS3Q9BRX5 216 aa11.62□□□□□ -0.55
UBE3B-209ENST00000539584 PBDC1Q9BVG4 233 aa11.62□□□□□ -0.55
UBE3B-209ENST00000539584 PRR13Q9NZ81 148 aa11.62□□□□□ -0.55
UBE3B-209ENST00000539584 C19orf25Q9UFG5 118 aaPredicted RBP11.62□□□□□ -0.55
UBE3B-209ENST00000539584 RP1P56715 2156 aa11.61□□□□□ -0.55
UBE3B-209ENST00000539584 RCC1P18754 421 aaPredicted RBP11.61□□□□□ -0.55
UBE3B-209ENST00000539584 AGAP20933 346 aa11.61□□□□□ -0.55
UBE3B-209ENST00000539584 LTBRP36941 435 aa11.61□□□□□ -0.55
UBE3B-209ENST00000539584 CSNK1A1P48729 337 aa11.61□□□□□ -0.55
UBE3B-209ENST00000539584 RAB1AP62820 205 aa11.61□□□□□ -0.55
UBE3B-209ENST00000539584 CARD17Q5XLA6 110 aa11.61□□□□□ -0.55
UBE3B-209ENST00000539584 C1QL2Q7Z5L3 287 aa11.61□□□□□ -0.55
UBE3B-209ENST00000539584 THAP3Q8WTV1 239 aaPredicted RBP11.61□□□□□ -0.55
UBE3B-209ENST00000539584 TMEM54Q969K7 222 aa11.61□□□□□ -0.55
UBE3B-209ENST00000539584 SPTSSAQ969W0 71 aa11.61□□□□□ -0.55
UBE3B-209ENST00000539584 LYZL4Q96KX0 146 aa11.61□□□□□ -0.55
UBE3B-209ENST00000539584 ANGPTL4Q9BY76 406 aa11.61□□□□□ -0.55
UBE3B-209ENST00000539584 TPSD1Q9BZJ3 242 aa11.61□□□□□ -0.55
UBE3B-209ENST00000539584 METTL9Q9H1A3 318 aa11.61□□□□□ -0.55
UBE3B-209ENST00000539584 RGCCQ9H4X1 137 aa11.61□□□□□ -0.55
UBE3B-209ENST00000539584 ADAMTS9Q9P2N4 1935 aa11.61□□□□□ -0.55
UBE3B-209ENST00000539584 EXPH5Q8NEV8 1989 aa11.6□□□□□ -0.55
UBE3B-209ENST00000539584 C2CD4DB7Z1M9 353 aa11.6□□□□□ -0.55
UBE3B-209ENST00000539584 OR5H8P0DN80 308 aa11.6□□□□□ -0.55
UBE3B-209ENST00000539584 GLP1RP43220 463 aa11.6□□□□□ -0.55
UBE3B-209ENST00000539584 UCP3P55916 312 aa11.6□□□□□ -0.55
UBE3B-209ENST00000539584 H3F3AP84243 136 aa11.6□□□□□ -0.55
UBE3B-209ENST00000539584 SHISA6Q6ZSJ9 500 aa11.6□□□□□ -0.55
UBE3B-209ENST00000539584 GALNTL5Q7Z4T8 443 aa11.6□□□□□ -0.55
UBE3B-209ENST00000539584 CPEB2Q7Z5Q1 589 aaKnown RBP11.6□□□□□ -0.55
UBE3B-209ENST00000539584 ZNF784Q8NCA9 323 aaPredicted RBP11.6□□□□□ -0.55
UBE3B-209ENST00000539584 MALSU1Q96EH3 234 aa11.6□□□□□ -0.55
UBE3B-209ENST00000539584 C14orf79Q96F83 325 aa11.6□□□□□ -0.55
Retrieved 100 of 20,778 RNA–protein pairs in 40 ms