RNA–Protein interactions for RNA: ENST00000538545.6

ACTN1-205, Transcript of actinin alpha 1, humanhuman

TSL 1 (best) BASIC

Gene ACTN1, Length 2,813 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ACTN1-205ENST00000538545 RABL2BQ9UNT1 228 aa12.19□□□□□ -0.46
ACTN1-205ENST00000538545 LHX6Q9UPM6 363 aa12.19□□□□□ -0.46
ACTN1-205ENST00000538545 COL6A6A6NMZ7 2263 aa12.18□□□□□ -0.46
ACTN1-205ENST00000538545 ARPC4-TTLL3A0A0A6YYG9 625 aa12.18□□□□□ -0.46
ACTN1-205ENST00000538545 HIST1H1DP16402 221 aaKnown RBP12.18□□□□□ -0.46
ACTN1-205ENST00000538545 GPM6AP51674 278 aa12.18□□□□□ -0.46
ACTN1-205ENST00000538545 TAS2R19P59542 299 aa12.18□□□□□ -0.46
ACTN1-205ENST00000538545 ACTBP60709 375 aa12.18□□□□□ -0.46
ACTN1-205ENST00000538545 ACTG1P63261 375 aa12.18□□□□□ -0.46
ACTN1-205ENST00000538545 ARFRP1Q13795 201 aa12.18□□□□□ -0.46
ACTN1-205ENST00000538545 OR8B8Q15620 311 aa12.18□□□□□ -0.46
ACTN1-205ENST00000538545 STK11Q15831 433 aa12.18□□□□□ -0.46
ACTN1-205ENST00000538545 MRGPRFQ96AM1 343 aa12.18□□□□□ -0.46
ACTN1-205ENST00000538545 IFT46Q9NQC8 304 aa12.18□□□□□ -0.46
ACTN1-205ENST00000538545 IL36RNQ9UBH0 155 aa12.18□□□□□ -0.46
ACTN1-205ENST00000538545 NAP1L6A6NFF2 107 aa12.18□□□□□ -0.46
ACTN1-205ENST00000538545 PROB1E7EW31 1015 aa12.18□□□□□ -0.46
ACTN1-205ENST00000538545 SDCBPO00560 298 aaPredicted RBP12.18□□□□□ -0.46
ACTN1-205ENST00000538545 GFRA3O60609 400 aa12.18□□□□□ -0.46
ACTN1-205ENST00000538545 TRAPPC2P0DI81 140 aa12.18□□□□□ -0.46
ACTN1-205ENST00000538545 TRAPPC2BP0DI82 140 aa12.18□□□□□ -0.46
ACTN1-205ENST00000538545 SELEP16581 610 aa12.18□□□□□ -0.46
ACTN1-205ENST00000538545 HOXD11P31277 338 aaPredicted RBP12.18□□□□□ -0.46
ACTN1-205ENST00000538545 RBP2P50120 134 aa12.18□□□□□ -0.46
ACTN1-205ENST00000538545 HOXA4Q00056 320 aaPredicted RBP12.18□□□□□ -0.46
ACTN1-205ENST00000538545 RBMS2Q15434 407 aaKnown RBP12.18□□□□□ -0.46
ACTN1-205ENST00000538545 SIGIRRQ6IA17 410 aa12.18□□□□□ -0.46
ACTN1-205ENST00000538545 OR2T2Q6IF00 324 aa12.18□□□□□ -0.46
ACTN1-205ENST00000538545 RAB12Q6IQ22 244 aa12.18□□□□□ -0.46
ACTN1-205ENST00000538545 NCCRP1Q6ZVX7 275 aaPredicted RBP12.18□□□□□ -0.46
ACTN1-205ENST00000538545 MRPL21Q7Z2W9 205 aaKnown RBP12.18□□□□□ -0.46
ACTN1-205ENST00000538545 C5orf24Q7Z6I8 188 aa12.18□□□□□ -0.46
ACTN1-205ENST00000538545 OR11H4Q8NGC9 324 aa12.18□□□□□ -0.46
ACTN1-205ENST00000538545 OR13C8Q8NGS7 320 aa12.18□□□□□ -0.46
ACTN1-205ENST00000538545 FBXW5Q969U6 566 aa12.18□□□□□ -0.46
ACTN1-205ENST00000538545 PLCE1Q9P212 2302 aa12.17□□□□□ -0.46
ACTN1-205ENST00000538545 IGKV1D-8A0A087WSZ0 117 aa12.17□□□□□ -0.46
ACTN1-205ENST00000538545 AQP7O14520 342 aa12.17□□□□□ -0.46
ACTN1-205ENST00000538545 MSTNO14793 375 aa12.17□□□□□ -0.46
ACTN1-205ENST00000538545 GEMIN2O14893 280 aaKnown RBP12.17□□□□□ -0.46
ACTN1-205ENST00000538545 SS18L1O75177 396 aaPredicted RBP12.17□□□□□ -0.46
ACTN1-205ENST00000538545 PER3P56645 1201 aa12.17□□□□□ -0.46
ACTN1-205ENST00000538545 CXADRP78310 365 aa12.17□□□□□ -0.46
ACTN1-205ENST00000538545 PLP2Q04941 152 aa12.17□□□□□ -0.46
ACTN1-205ENST00000538545 RSU1Q15404 277 aa12.17□□□□□ -0.46
ACTN1-205ENST00000538545 ALKBH6Q3KRA9 238 aa12.17□□□□□ -0.46
ACTN1-205ENST00000538545 NRN1LQ496H8 165 aa12.17□□□□□ -0.46
ACTN1-205ENST00000538545 ACSF3Q4G176 576 aaPredicted RBP12.17□□□□□ -0.46
ACTN1-205ENST00000538545 SLC30A7Q8NEW0 376 aa12.17□□□□□ -0.46
ACTN1-205ENST00000538545 ZNF75AQ96N20 296 aa12.17□□□□□ -0.46
ACTN1-205ENST00000538545 REPIN1Q9BWE0 567 aaKnown RBP12.17□□□□□ -0.46
ACTN1-205ENST00000538545 CST11Q9H112 138 aa12.17□□□□□ -0.46
ACTN1-205ENST00000538545 MOV10Q9HCE1 1003 aaKnown RBP12.17□□□□□ -0.46
ACTN1-205ENST00000538545 ING3Q9NXR8 418 aa12.17□□□□□ -0.46
ACTN1-205ENST00000538545 TAS2R8Q9NYW2 309 aa12.17□□□□□ -0.46
ACTN1-205ENST00000538545 KIAA2026Q5HYC2 2103 aa12.17□□□□□ -0.46
ACTN1-205ENST00000538545 FAUP35544 74 aaKnown RBP12.17□□□□□ -0.46
ACTN1-205ENST00000538545 TMEM42Q69YG0 159 aa12.17□□□□□ -0.46
ACTN1-205ENST00000538545 SLC25A26Q70HW3 274 aa12.17□□□□□ -0.46
ACTN1-205ENST00000538545 SPACA3Q8IXA5 215 aa12.17□□□□□ -0.46
ACTN1-205ENST00000538545 PIAS4Q8N2W9 510 aaPredicted RBP12.17□□□□□ -0.46
ACTN1-205ENST00000538545 ZNF610Q8N9Z0 462 aa12.17□□□□□ -0.46
ACTN1-205ENST00000538545 HPSE2Q8WWQ2 592 aa12.17□□□□□ -0.46
ACTN1-205ENST00000538545 SARAFQ96BY9 339 aa12.17□□□□□ -0.46
ACTN1-205ENST00000538545 ZNF488Q96MN9 340 aa12.17□□□□□ -0.46
ACTN1-205ENST00000538545 FAAP24Q9BTP7 215 aa12.17□□□□□ -0.46
ACTN1-205ENST00000538545 ZNF175Q9Y473 711 aa12.17□□□□□ -0.46
ACTN1-205ENST00000538545 ZNF816-ZNF321PA0A0X1KG74 233 aa12.16□□□□□ -0.46
ACTN1-205ENST00000538545 OR6C65A6NJZ3 312 aa12.16□□□□□ -0.46
ACTN1-205ENST00000538545 MFNGO00587 321 aa12.16□□□□□ -0.46
ACTN1-205ENST00000538545 XRCC2O43543 280 aa12.16□□□□□ -0.46
ACTN1-205ENST00000538545 PI3P19957 117 aa12.16□□□□□ -0.46
ACTN1-205ENST00000538545 DUSP1P28562 367 aa12.16□□□□□ -0.46
ACTN1-205ENST00000538545 APLNRP35414 380 aa12.16□□□□□ -0.46
ACTN1-205ENST00000538545 GMFBP60983 142 aa12.16□□□□□ -0.46
ACTN1-205ENST00000538545 PRDX4Q13162 271 aa12.16□□□□□ -0.46
ACTN1-205ENST00000538545 MAB21L1Q13394 359 aa12.16□□□□□ -0.46
ACTN1-205ENST00000538545 MICBQ29980 383 aa12.16□□□□□ -0.46
ACTN1-205ENST00000538545 GLDNQ6ZMI3 551 aaPredicted RBP12.16□□□□□ -0.46
ACTN1-205ENST00000538545 OR2W3Q7Z3T1 314 aa12.16□□□□□ -0.46
ACTN1-205ENST00000538545 FBXL14Q8N1E6 418 aa12.16□□□□□ -0.46
ACTN1-205ENST00000538545 TMEM229BQ8NBD8 167 aa12.16□□□□□ -0.46
ACTN1-205ENST00000538545 WBP1Q96G27 269 aa12.16□□□□□ -0.46
ACTN1-205ENST00000538545 SH3BGRL2Q9UJC5 107 aa12.16□□□□□ -0.46
ACTN1-205ENST00000538545 TP53TG5Q9Y2B4 290 aa12.16□□□□□ -0.46
ACTN1-205ENST00000538545 CSTBP04080 98 aaKnown RBP12.16□□□□□ -0.46
ACTN1-205ENST00000538545 RNASE10Q5GAN6 216 aaKnown RBP12.16□□□□□ -0.46
ACTN1-205ENST00000538545 Q6ZS92 163 aa12.16□□□□□ -0.46
ACTN1-205ENST00000538545 MUC20Q8N307 709 aaPredicted RBP12.16□□□□□ -0.46
ACTN1-205ENST00000538545 ZNF611Q8N823 705 aa12.16□□□□□ -0.46
ACTN1-205ENST00000538545 OR51F2Q8NH61 342 aa12.16□□□□□ -0.46
ACTN1-205ENST00000538545 URM1Q9BTM9 101 aaKnown RBP12.16□□□□□ -0.46
ACTN1-205ENST00000538545 PECRQ9BY49 303 aa12.16□□□□□ -0.46
ACTN1-205ENST00000538545 ZNF701Q9NV72 531 aaPredicted RBP12.16□□□□□ -0.46
ACTN1-205ENST00000538545 FZR1Q9UM11 496 aa12.16□□□□□ -0.46
ACTN1-205ENST00000538545 POLEQ07864 2286 aa12.16□□□□□ -0.46
ACTN1-205ENST00000538545 A0A0A6YYH2 397 aa12.15□□□□□ -0.46
ACTN1-205ENST00000538545 OR14I1A6ND48 311 aa12.15□□□□□ -0.46
ACTN1-205ENST00000538545 A6NJ64 397 aa12.15□□□□□ -0.46
ACTN1-205ENST00000538545 OR2AT4A6NND4 320 aa12.15□□□□□ -0.46
Retrieved 100 of 20,778 RNA–protein pairs in 32.3 ms