RNA–Protein interactions for RNA: ENST00000537556.1

SRGAP1-202, Transcript of SLIT-ROBO Rho GTPase activating protein 1, humanhuman

TSL 2

Gene SRGAP1, Length 2,976 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SRGAP1-202ENST00000537556 BCL2L2Q92843 193 aaPredicted RBP7.55□□□□□ -1.2
SRGAP1-202ENST00000537556 IL22RA2Q969J5 263 aa7.55□□□□□ -1.2
SRGAP1-202ENST00000537556 FAM46BQ96A09 425 aa7.55□□□□□ -1.2
SRGAP1-202ENST00000537556 CTHRC1Q96CG8 243 aa7.55□□□□□ -1.2
SRGAP1-202ENST00000537556 TXN2Q99757 166 aa7.55□□□□□ -1.2
SRGAP1-202ENST00000537556 PRR13Q9NZ81 148 aa7.55□□□□□ -1.2
SRGAP1-202ENST00000537556 FCF1Q9Y324 198 aaKnown RBP7.55□□□□□ -1.2
SRGAP1-202ENST00000537556 FGF17O60258 216 aa7.55□□□□□ -1.2
SRGAP1-202ENST00000537556 CNOT4O95628 575 aaKnown RBP7.55□□□□□ -1.2
SRGAP1-202ENST00000537556 HNRNPA3P51991 378 aaKnown RBP7.55□□□□□ -1.2
SRGAP1-202ENST00000537556 VAMP3Q15836 100 aa7.55□□□□□ -1.2
SRGAP1-202ENST00000537556 MPV17LQ2QL34 196 aa7.55□□□□□ -1.2
SRGAP1-202ENST00000537556 SMIM21Q3B7S5 101 aa7.55□□□□□ -1.2
SRGAP1-202ENST00000537556 CATSPERDQ86XM0 798 aa7.55□□□□□ -1.2
SRGAP1-202ENST00000537556 NUP43Q8NFH3 380 aa7.55□□□□□ -1.2
SRGAP1-202ENST00000537556 DYRK2Q92630 601 aa7.55□□□□□ -1.2
SRGAP1-202ENST00000537556 LPAR4Q99677 370 aa7.55□□□□□ -1.2
SRGAP1-202ENST00000537556 ALG12Q9BV10 488 aa7.55□□□□□ -1.2
SRGAP1-202ENST00000537556 WFDC1Q9HC57 220 aa7.55□□□□□ -1.2
SRGAP1-202ENST00000537556 ADAM29Q9UKF5 820 aa7.55□□□□□ -1.2
SRGAP1-202ENST00000537556 PRR32B1ATL7 298 aa7.54□□□□□ -1.2
SRGAP1-202ENST00000537556 C17orf105B2RV13 164 aa7.54□□□□□ -1.2
SRGAP1-202ENST00000537556 J3QW42 95 aa7.54□□□□□ -1.2
SRGAP1-202ENST00000537556 YPEL1O60688 119 aa7.54□□□□□ -1.2
SRGAP1-202ENST00000537556 SCGB1D2O95969 90 aa7.54□□□□□ -1.2
SRGAP1-202ENST00000537556 ZNF43P17038 809 aa7.54□□□□□ -1.2
SRGAP1-202ENST00000537556 TPPP2P59282 170 aa7.54□□□□□ -1.2
SRGAP1-202ENST00000537556 Q5PR19 223 aa7.54□□□□□ -1.2
SRGAP1-202ENST00000537556 CST9LP1Q5W188 147 aa7.54□□□□□ -1.2
SRGAP1-202ENST00000537556 RTN4RL1Q86UN2 441 aaPredicted RBP7.54□□□□□ -1.2
SRGAP1-202ENST00000537556 CSNK1A1LQ8N752 337 aa7.54□□□□□ -1.2
SRGAP1-202ENST00000537556 NKD1Q969G9 470 aa7.54□□□□□ -1.2
SRGAP1-202ENST00000537556 APH1AQ96BI3 265 aa7.54□□□□□ -1.2
SRGAP1-202ENST00000537556 BTF3L4Q96K17 158 aa7.54□□□□□ -1.2
SRGAP1-202ENST00000537556 TMEM56Q96MV1 263 aa7.54□□□□□ -1.2
SRGAP1-202ENST00000537556 YPEL2Q96QA6 119 aa7.54□□□□□ -1.2
SRGAP1-202ENST00000537556 NMNAT3Q96T66 252 aa7.54□□□□□ -1.2
SRGAP1-202ENST00000537556 ULBP3Q9BZM4 244 aa7.54□□□□□ -1.2
SRGAP1-202ENST00000537556 GPR84Q9NQS5 396 aa7.54□□□□□ -1.2
SRGAP1-202ENST00000537556 PADI3Q9ULW8 664 aa7.54□□□□□ -1.2
SRGAP1-202ENST00000537556 TMEM56-RWDD3S4R434 201 aa7.54□□□□□ -1.2
SRGAP1-202ENST00000537556 SMIM35A0A1B0GVV1 85 aa7.54□□□□□ -1.2
SRGAP1-202ENST00000537556 NPIPB15A6NHN6 443 aaPredicted RBP7.54□□□□□ -1.2
SRGAP1-202ENST00000537556 H3BSH0 61 aa7.54□□□□□ -1.2
SRGAP1-202ENST00000537556 TRAPPC6AO75865 159 aa7.54□□□□□ -1.2
SRGAP1-202ENST00000537556 OR6A2O95222 327 aa7.54□□□□□ -1.2
SRGAP1-202ENST00000537556 BPNT1O95861 308 aa7.54□□□□□ -1.2
SRGAP1-202ENST00000537556 GALR1P47211 349 aa7.54□□□□□ -1.2
SRGAP1-202ENST00000537556 BLKP51451 505 aa7.54□□□□□ -1.2
SRGAP1-202ENST00000537556 ZP2Q05996 745 aa7.54□□□□□ -1.2
SRGAP1-202ENST00000537556 ARL6IP1Q15041 203 aa7.54□□□□□ -1.2
SRGAP1-202ENST00000537556 CEBPEQ15744 281 aa7.54□□□□□ -1.2
SRGAP1-202ENST00000537556 TDRG1Q3Y452 100 aa7.54□□□□□ -1.2
SRGAP1-202ENST00000537556 FAM90A2PQ658T7 463 aa7.54□□□□□ -1.2
SRGAP1-202ENST00000537556 GLB1LQ6UWU2 654 aa7.54□□□□□ -1.2
SRGAP1-202ENST00000537556 ZFP62Q8NB50 900 aaPredicted RBP7.54□□□□□ -1.2
SRGAP1-202ENST00000537556 OR51G1Q8NGK1 321 aa7.54□□□□□ -1.2
SRGAP1-202ENST00000537556 RTBDNQ9BSG5 229 aaPredicted RBP7.54□□□□□ -1.2
SRGAP1-202ENST00000537556 MTIF3Q9H2K0 278 aaKnown RBP7.54□□□□□ -1.2
SRGAP1-202ENST00000537556 MKKSQ9NPJ1 570 aaPredicted RBP7.54□□□□□ -1.2
SRGAP1-202ENST00000537556 OR6C3Q9NZP0 311 aa7.54□□□□□ -1.2
SRGAP1-202ENST00000537556 TBX21Q9UL17 535 aa7.54□□□□□ -1.2
SRGAP1-202ENST00000537556 DHDHQ9UQ10 334 aa7.54□□□□□ -1.2
SRGAP1-202ENST00000537556 AQP7P3A6NL99 342 aa7.53□□□□□ -1.2
SRGAP1-202ENST00000537556 H7BYZ3 331 aa7.53□□□□□ -1.2
SRGAP1-202ENST00000537556 TMPRSS11DO60235 418 aa7.53□□□□□ -1.2
SRGAP1-202ENST00000537556 ABHD16AO95870 558 aa7.53□□□□□ -1.2
SRGAP1-202ENST00000537556 NID1P14543 1247 aa7.53□□□□□ -1.2
SRGAP1-202ENST00000537556 ZNF117Q03924 483 aa7.53□□□□□ -1.2
SRGAP1-202ENST00000537556 SLC17A1Q14916 467 aa7.53□□□□□ -1.2
SRGAP1-202ENST00000537556 SLC22A6Q4U2R8 563 aa7.53□□□□□ -1.2
SRGAP1-202ENST00000537556 TMEM225Q6GV28 225 aa7.53□□□□□ -1.2
SRGAP1-202ENST00000537556 PRSS57Q6UWY2 283 aa7.53□□□□□ -1.2
SRGAP1-202ENST00000537556 MEX3BQ6ZN04 569 aaKnown RBP7.53□□□□□ -1.2
SRGAP1-202ENST00000537556 ZNRF4Q8WWF5 429 aa7.53□□□□□ -1.2
SRGAP1-202ENST00000537556 LOXL4Q96JB6 756 aa7.53□□□□□ -1.2
SRGAP1-202ENST00000537556 PAAF1Q9BRP4 392 aa7.53□□□□□ -1.2
SRGAP1-202ENST00000537556 HIPK2Q9H2X6 1198 aa7.53□□□□□ -1.2
SRGAP1-202ENST00000537556 PPIAL4AQ9Y536 164 aa7.53□□□□□ -1.2
SRGAP1-202ENST00000537556 MRPS18BQ9Y676 258 aaKnown RBP7.53□□□□□ -1.2
SRGAP1-202ENST00000537556 TMEM14AQ9Y6G1 99 aa7.53□□□□□ -1.2
SRGAP1-202ENST00000537556 LOC102723971A0A1B0GUV8 181 aa7.53□□□□□ -1.2
SRGAP1-202ENST00000537556 VSTM2BA6NLU5 285 aa7.53□□□□□ -1.2
SRGAP1-202ENST00000537556 OR2AG2A6NM03 316 aa7.53□□□□□ -1.2
SRGAP1-202ENST00000537556 MTX2O75431 263 aa7.53□□□□□ -1.2
SRGAP1-202ENST00000537556 C1orf105O95561 183 aa7.53□□□□□ -1.2
SRGAP1-202ENST00000537556 CSTAP01040 98 aa7.53□□□□□ -1.2
SRGAP1-202ENST00000537556 PI3P19957 117 aa7.53□□□□□ -1.2
SRGAP1-202ENST00000537556 TCN2P20062 427 aa7.53□□□□□ -1.2
SRGAP1-202ENST00000537556 EPHA8P29322 1005 aaPredicted RBP7.53□□□□□ -1.2
SRGAP1-202ENST00000537556 ERVS71-1P61550 626 aa7.53□□□□□ -1.2
SRGAP1-202ENST00000537556 SUMO1P63165 101 aaKnown RBP7.53□□□□□ -1.2
SRGAP1-202ENST00000537556 RHOGP84095 191 aa7.53□□□□□ -1.2
SRGAP1-202ENST00000537556 MFGE8Q08431 387 aaPredicted RBP7.53□□□□□ -1.2
SRGAP1-202ENST00000537556 ZNF468Q5VIY5 522 aaPredicted RBP7.53□□□□□ -1.2
SRGAP1-202ENST00000537556 WDR25Q64LD2 544 aaPredicted RBP7.53□□□□□ -1.2
SRGAP1-202ENST00000537556 WDR73Q6P4I2 378 aa7.53□□□□□ -1.2
SRGAP1-202ENST00000537556 Q6ZN92 141 aa7.53□□□□□ -1.2
SRGAP1-202ENST00000537556 SPRED2Q7Z698 418 aa7.53□□□□□ -1.2
SRGAP1-202ENST00000537556 D2HGDHQ8N465 521 aa7.53□□□□□ -1.2
Retrieved 100 of 20,778 RNA–protein pairs in 27.2 ms