RNA–Protein interactions for RNA: ENST00000535313.1

CLSTN3-204, Transcript of calsyntenin 3, humanhuman

TSL 2

Gene CLSTN3, Length 787 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLSTN3-204ENST00000535313 OR5B21A6NL26 309 aa13.3□□□□□ -0.28
CLSTN3-204ENST00000535313 PRKYO43930 277 aa13.3□□□□□ -0.28
CLSTN3-204ENST00000535313 GPR137BO60478 399 aa13.3□□□□□ -0.28
CLSTN3-204ENST00000535313 MTRF1O75570 445 aaKnown RBP13.3□□□□□ -0.28
CLSTN3-204ENST00000535313 TFF1P04155 84 aa13.3□□□□□ -0.28
CLSTN3-204ENST00000535313 FBP1P09467 338 aa13.3□□□□□ -0.28
CLSTN3-204ENST00000535313 CAV3P56539 151 aa13.3□□□□□ -0.28
CLSTN3-204ENST00000535313 ACTR3P61158 418 aa13.3□□□□□ -0.28
CLSTN3-204ENST00000535313 RELBQ01201 579 aa13.3□□□□□ -0.28
CLSTN3-204ENST00000535313 BLMHQ13867 455 aa13.3□□□□□ -0.28
CLSTN3-204ENST00000535313 ZBTB37Q5TC79 503 aa13.3□□□□□ -0.28
CLSTN3-204ENST00000535313 PLCXD3Q63HM9 321 aa13.3□□□□□ -0.28
CLSTN3-204ENST00000535313 GDPGP1Q6ZNW5 385 aa13.3□□□□□ -0.28
CLSTN3-204ENST00000535313 MEPCEQ7L2J0 689 aaKnown RBP13.3□□□□□ -0.28
CLSTN3-204ENST00000535313 LRTOMTQ8WZ04 291 aa13.3□□□□□ -0.28
CLSTN3-204ENST00000535313 TTTY10Q9BZA0 68 aa13.3□□□□□ -0.28
CLSTN3-204ENST00000535313 NUFIP1Q9UHK0 495 aaKnown RBP13.3□□□□□ -0.28
CLSTN3-204ENST00000535313 GTF2A1LQ9UNN4 478 aa13.3□□□□□ -0.28
CLSTN3-204ENST00000535313 SLC22A31A6NKX4 558 aa13.29□□□□□ -0.28
CLSTN3-204ENST00000535313 PRR32B1ATL7 298 aa13.29□□□□□ -0.28
CLSTN3-204ENST00000535313 G3V2T6 193 aa13.29□□□□□ -0.28
CLSTN3-204ENST00000535313 RNASEK-C17orf49H0YIS7 233 aa13.29□□□□□ -0.28
CLSTN3-204ENST00000535313 M0R1W7 72 aa13.29□□□□□ -0.28
CLSTN3-204ENST00000535313 NPFFO15130 113 aa13.29□□□□□ -0.28
CLSTN3-204ENST00000535313 ATP5HO75947 161 aa13.29□□□□□ -0.28
CLSTN3-204ENST00000535313 NRASP01111 189 aa13.29□□□□□ -0.28
CLSTN3-204ENST00000535313 FAHP16930 419 aa13.29□□□□□ -0.28
CLSTN3-204ENST00000535313 PRB3Q04118 309 aaPredicted RBP13.29□□□□□ -0.28
CLSTN3-204ENST00000535313 NCR3LG1Q68D85 454 aa13.29□□□□□ -0.28
CLSTN3-204ENST00000535313 HAGHLQ6PII5 290 aaPredicted RBP13.29□□□□□ -0.28
CLSTN3-204ENST00000535313 ZNF322Q6U7Q0 402 aaPredicted RBP13.29□□□□□ -0.28
CLSTN3-204ENST00000535313 C1orf122Q6ZSJ8 110 aa13.29□□□□□ -0.28
CLSTN3-204ENST00000535313 Q8N7P7 452 aa13.29□□□□□ -0.28
CLSTN3-204ENST00000535313 TCEANCQ8N8B7 351 aa13.29□□□□□ -0.28
CLSTN3-204ENST00000535313 AQP3Q92482 292 aa13.29□□□□□ -0.28
CLSTN3-204ENST00000535313 MNTQ99583 582 aa13.29□□□□□ -0.28
CLSTN3-204ENST00000535313 METTL8Q9H825 291 aaKnown RBP13.29□□□□□ -0.28
CLSTN3-204ENST00000535313 MOB1AQ9H8S9 216 aa13.29□□□□□ -0.28
CLSTN3-204ENST00000535313 RASL12Q9NYN1 266 aa13.29□□□□□ -0.28
CLSTN3-204ENST00000535313 A0A1W2PRD5 423 aa13.28□□□□□ -0.28
CLSTN3-204ENST00000535313 A0A1W2PRF3 423 aa13.28□□□□□ -0.28
CLSTN3-204ENST00000535313 A0A1W2PRM7 423 aa13.28□□□□□ -0.28
CLSTN3-204ENST00000535313 ZNF670-ZNF695F2Z2N8 137 aa13.28□□□□□ -0.28
CLSTN3-204ENST00000535313 LOC110117498-PIK3R3F6TDL0 507 aa13.28□□□□□ -0.28
CLSTN3-204ENST00000535313 EBAG9O00559 213 aa13.28□□□□□ -0.28
CLSTN3-204ENST00000535313 WIPF1O43516 503 aa13.28□□□□□ -0.28
CLSTN3-204ENST00000535313 MITFO75030 526 aaPredicted RBP13.28□□□□□ -0.28
CLSTN3-204ENST00000535313 DHRS3O75911 302 aa13.28□□□□□ -0.28
CLSTN3-204ENST00000535313 PAHP00439 452 aa13.28□□□□□ -0.28
CLSTN3-204ENST00000535313 IGLV3-1P01715 115 aa13.28□□□□□ -0.28
CLSTN3-204ENST00000535313 PSG2P11465 335 aa13.28□□□□□ -0.28
CLSTN3-204ENST00000535313 CXCR4P61073 352 aa13.28□□□□□ -0.28
CLSTN3-204ENST00000535313 GABPB1Q06547 395 aaPredicted RBP13.28□□□□□ -0.28
CLSTN3-204ENST00000535313 MFGE8Q08431 387 aaPredicted RBP13.28□□□□□ -0.28
CLSTN3-204ENST00000535313 ATP6AP1Q15904 470 aa13.28□□□□□ -0.28
CLSTN3-204ENST00000535313 DMRTC1Q5HYR2 192 aa13.28□□□□□ -0.28
CLSTN3-204ENST00000535313 ZNF684Q5T5D7 378 aa13.28□□□□□ -0.28
CLSTN3-204ENST00000535313 BCL2L15Q5TBC7 163 aa13.28□□□□□ -0.28
CLSTN3-204ENST00000535313 NXNL2Q5VZ03 156 aa13.28□□□□□ -0.28
CLSTN3-204ENST00000535313 BRICD5Q6PL45 260 aa13.28□□□□□ -0.28
CLSTN3-204ENST00000535313 CCDC121Q6ZUS5 278 aa13.28□□□□□ -0.28
CLSTN3-204ENST00000535313 BCDIN3DQ7Z5W3 292 aaKnown RBP13.28□□□□□ -0.28
CLSTN3-204ENST00000535313 ZDHHC13Q8IUH4 622 aa13.28□□□□□ -0.28
CLSTN3-204ENST00000535313 SLC35F2Q8IXU6 374 aa13.28□□□□□ -0.28
CLSTN3-204ENST00000535313 ZNRF1Q8ND25 227 aa13.28□□□□□ -0.28
CLSTN3-204ENST00000535313 TMEM185AQ8NFB2 350 aa13.28□□□□□ -0.28
CLSTN3-204ENST00000535313 PPP1R14AQ96A00 147 aa13.28□□□□□ -0.28
CLSTN3-204ENST00000535313 SEMA6AQ9H2E6 1030 aa13.28□□□□□ -0.28
CLSTN3-204ENST00000535313 ENOPH1Q9UHY7 261 aa13.28□□□□□ -0.28
CLSTN3-204ENST00000535313 IGKV1D-17A0A075B6S4 117 aa13.27□□□□□ -0.29
CLSTN3-204ENST00000535313 TRBV23-1A0A0A0MS06 115 aa13.27□□□□□ -0.29
CLSTN3-204ENST00000535313 MEIOCA2RUB1 952 aa13.27□□□□□ -0.29
CLSTN3-204ENST00000535313 M0R129 80 aa13.27□□□□□ -0.29
CLSTN3-204ENST00000535313 TTRP02766 147 aa13.27□□□□□ -0.29
CLSTN3-204ENST00000535313 FASP25445 335 aa13.27□□□□□ -0.29
CLSTN3-204ENST00000535313 RASSF2P50749 326 aa13.27□□□□□ -0.29
CLSTN3-204ENST00000535313 UBE2E1P51965 193 aa13.27□□□□□ -0.29
CLSTN3-204ENST00000535313 CAPZA1P52907 286 aa13.27□□□□□ -0.29
CLSTN3-204ENST00000535313 DLX1P56177 255 aa13.27□□□□□ -0.29
CLSTN3-204ENST00000535313 EGR3Q06889 387 aa13.27□□□□□ -0.29
CLSTN3-204ENST00000535313 SRSF4Q08170 494 aaKnown RBP13.27□□□□□ -0.29
CLSTN3-204ENST00000535313 KLRD1Q13241 179 aa13.27□□□□□ -0.29
CLSTN3-204ENST00000535313 SMIM21Q3B7S5 101 aa13.27□□□□□ -0.29
CLSTN3-204ENST00000535313 CLVS2Q5SYC1 327 aa13.27□□□□□ -0.29
CLSTN3-204ENST00000535313 AADACL4Q5VUY2 407 aa13.27□□□□□ -0.29
CLSTN3-204ENST00000535313 SLX4IPQ5VYV7 408 aa13.27□□□□□ -0.29
CLSTN3-204ENST00000535313 ZNF573Q86YE8 665 aa13.27□□□□□ -0.29
CLSTN3-204ENST00000535313 GID4Q8IVV7 300 aa13.27□□□□□ -0.29
CLSTN3-204ENST00000535313 TMEM163Q8TC26 289 aa13.27□□□□□ -0.29
CLSTN3-204ENST00000535313 TNFRSF14Q92956 283 aa13.27□□□□□ -0.29
CLSTN3-204ENST00000535313 DUS3LQ96G46 650 aaKnown RBP13.27□□□□□ -0.29
CLSTN3-204ENST00000535313 IL4I1Q96RQ9 567 aa13.27□□□□□ -0.29
CLSTN3-204ENST00000535313 APOL4Q9BPW4 351 aa13.27□□□□□ -0.29
CLSTN3-204ENST00000535313 ELL3Q9HB65 397 aaPredicted RBP13.27□□□□□ -0.29
CLSTN3-204ENST00000535313 ADGRL4Q9HBW9 690 aa13.27□□□□□ -0.29
CLSTN3-204ENST00000535313 CLN6Q9NWW5 311 aa13.27□□□□□ -0.29
CLSTN3-204ENST00000535313 ZNRD1Q9P1U0 126 aa13.27□□□□□ -0.29
CLSTN3-204ENST00000535313 ZNF222Q9UK12 451 aa13.27□□□□□ -0.29
CLSTN3-204ENST00000535313 RNF114Q9Y508 228 aa13.27□□□□□ -0.29
CLSTN3-204ENST00000535313 R4GMQ9 66 aa13.27□□□□□ -0.29
Retrieved 100 of 20,778 RNA–protein pairs in 24.3 ms