RNA–Protein interactions for RNA: ENST00000535236.5

SFSWAP-203, Transcript of splicing factor SWAP, humanhuman

TSL 1 (best)

Gene SFSWAP, Length 5,593 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SFSWAP-203ENST00000535236 ZNF425Q6IV72 752 aa16.23■□□□□ 0.19
SFSWAP-203ENST00000535236 ZNF574Q6ZN55 896 aaPredicted RBP16.23■□□□□ 0.19
SFSWAP-203ENST00000535236 RELL2Q8NC24 303 aaPredicted RBP16.23■□□□□ 0.19
SFSWAP-203ENST00000535236 MCHR2Q969V1 340 aa16.23■□□□□ 0.19
SFSWAP-203ENST00000535236 TMEM208Q9BTX3 173 aa16.23■□□□□ 0.19
SFSWAP-203ENST00000535236 ZDHHC11Q9H8X9 412 aa16.23■□□□□ 0.19
SFSWAP-203ENST00000535236 MASP2O00187 686 aa16.23■□□□□ 0.19
SFSWAP-203ENST00000535236 FGF2P09038 288 aa16.23■□□□□ 0.19
SFSWAP-203ENST00000535236 SRD5A2P31213 254 aa16.23■□□□□ 0.19
SFSWAP-203ENST00000535236 ASCL1P50553 236 aa16.23■□□□□ 0.19
SFSWAP-203ENST00000535236 PPP1CBP62140 327 aa16.23■□□□□ 0.19
SFSWAP-203ENST00000535236 KISS1Q15726 138 aa16.23■□□□□ 0.19
SFSWAP-203ENST00000535236 TMPRSS11FQ6ZWK6 438 aa16.23■□□□□ 0.19
SFSWAP-203ENST00000535236 OR52B4Q8NGK2 314 aa16.23■□□□□ 0.19
SFSWAP-203ENST00000535236 RFESDQ8TAC1 157 aa16.23■□□□□ 0.19
SFSWAP-203ENST00000535236 C2CD4CQ8TF44 421 aa16.23■□□□□ 0.19
SFSWAP-203ENST00000535236 CPN1P15169 458 aa16.23■□□□□ 0.19
SFSWAP-203ENST00000535236 ZNF793Q6ZN11 406 aa16.23■□□□□ 0.19
SFSWAP-203ENST00000535236 NPEPL1Q8NDH3 523 aa16.23■□□□□ 0.19
SFSWAP-203ENST00000535236 SMIM4Q8WVI0 70 aa16.23■□□□□ 0.19
SFSWAP-203ENST00000535236 CXorf58Q96LI9 332 aa16.23■□□□□ 0.19
SFSWAP-203ENST00000535236 A0A1W2PPQ1 181 aa16.22■□□□□ 0.19
SFSWAP-203ENST00000535236 B3GALNT1O75752 331 aa16.22■□□□□ 0.19
SFSWAP-203ENST00000535236 GPANK1O95872 356 aa16.22■□□□□ 0.19
SFSWAP-203ENST00000535236 PAX5Q02548 391 aa16.22■□□□□ 0.19
SFSWAP-203ENST00000535236 NUFIP2Q7Z417 695 aaKnown RBP16.22■□□□□ 0.19
SFSWAP-203ENST00000535236 CARFQ8N187 725 aa16.22■□□□□ 0.19
SFSWAP-203ENST00000535236 YIPF6Q96EC8 236 aa16.22■□□□□ 0.19
SFSWAP-203ENST00000535236 NEIL1Q96FI4 390 aaPredicted RBP16.22■□□□□ 0.19
SFSWAP-203ENST00000535236 A0A1B0GTL3 188 aa16.22■□□□□ 0.19
SFSWAP-203ENST00000535236 ACSM4P0C7M7 580 aa16.22■□□□□ 0.19
SFSWAP-203ENST00000535236 FPR2P25090 351 aa16.22■□□□□ 0.19
SFSWAP-203ENST00000535236 OR2I1PQ8NGU4 316 aa16.22■□□□□ 0.19
SFSWAP-203ENST00000535236 ERRFI1Q9UJM3 462 aaPredicted RBP16.22■□□□□ 0.19
SFSWAP-203ENST00000535236 CISD3P0C7P0 127 aa16.22■□□□□ 0.19
SFSWAP-203ENST00000535236 KIR2DS2P43631 304 aa16.22■□□□□ 0.19
SFSWAP-203ENST00000535236 OR2B8PP59922 312 aa16.22■□□□□ 0.19
SFSWAP-203ENST00000535236 NHLRC1Q6VVB1 395 aa16.22■□□□□ 0.19
SFSWAP-203ENST00000535236 TNFRSF19Q9NS68 423 aa16.22■□□□□ 0.19
SFSWAP-203ENST00000535236 DNAJB12Q9NXW2 375 aaKnown RBP16.22■□□□□ 0.19
SFSWAP-203ENST00000535236 FAM27D1Q5T7N8 215 aa16.22■□□□□ 0.19
SFSWAP-203ENST00000535236 DPF1Q92782 380 aa16.22■□□□□ 0.19
SFSWAP-203ENST00000535236 SEBOXQ9HB31 216 aaPredicted RBP16.22■□□□□ 0.19
SFSWAP-203ENST00000535236 UQCC1Q9NVA1 299 aa16.22■□□□□ 0.19
SFSWAP-203ENST00000535236 SIGLEC7Q9Y286 467 aa16.22■□□□□ 0.19
SFSWAP-203ENST00000535236 HOXC4P09017 264 aaPredicted RBP16.21■□□□□ 0.19
SFSWAP-203ENST00000535236 SBK3P0C264 359 aa16.21■□□□□ 0.19
SFSWAP-203ENST00000535236 LPAR6P43657 344 aa16.21■□□□□ 0.19
SFSWAP-203ENST00000535236 PRICKLE4Q2TBC4 344 aa16.21■□□□□ 0.19
SFSWAP-203ENST00000535236 Q3ZCU0 254 aa16.21■□□□□ 0.19
SFSWAP-203ENST00000535236 FA2HQ7L5A8 372 aa16.21■□□□□ 0.19
SFSWAP-203ENST00000535236 OR6S1Q8NH40 331 aa16.21■□□□□ 0.19
SFSWAP-203ENST00000535236 CT55Q8WUE5 264 aa16.21■□□□□ 0.19
SFSWAP-203ENST00000535236 FKBP11Q9NYL4 201 aa16.21■□□□□ 0.19
SFSWAP-203ENST00000535236 THYN1Q9P016 225 aa16.21■□□□□ 0.19
SFSWAP-203ENST00000535236 TRIM77I1YAP6 450 aa16.21■□□□□ 0.19
SFSWAP-203ENST00000535236 BTAF1O14981 1849 aa16.21■□□□□ 0.19
SFSWAP-203ENST00000535236 BCL2L11O43521 198 aa16.21■□□□□ 0.19
SFSWAP-203ENST00000535236 COL9A1P20849 921 aa16.21■□□□□ 0.19
SFSWAP-203ENST00000535236 WDR38Q5JTN6 314 aa16.21■□□□□ 0.19
SFSWAP-203ENST00000535236 GABRA1P14867 456 aa16.21■□□□□ 0.19
SFSWAP-203ENST00000535236 EPHA2P29317 976 aa16.21■□□□□ 0.19
SFSWAP-203ENST00000535236 MMP15P51511 669 aa16.21■□□□□ 0.19
SFSWAP-203ENST00000535236 RHOBP62745 196 aa16.21■□□□□ 0.19
SFSWAP-203ENST00000535236 LILRA6Q6PI73 481 aa16.21■□□□□ 0.19
SFSWAP-203ENST00000535236 MRGPREQ86SM8 312 aa16.21■□□□□ 0.19
SFSWAP-203ENST00000535236 C20orf196Q8IYI0 205 aa16.21■□□□□ 0.19
SFSWAP-203ENST00000535236 CLEC5AQ9NY25 188 aa16.21■□□□□ 0.19
SFSWAP-203ENST00000535236 IL36GQ9NZH8 169 aa16.21■□□□□ 0.19
SFSWAP-203ENST00000535236 LOC102723971A0A1B0GUV8 181 aa16.21■□□□□ 0.19
SFSWAP-203ENST00000535236 F5H697 171 aa16.21■□□□□ 0.19
SFSWAP-203ENST00000535236 SOX8P57073 446 aa16.21■□□□□ 0.19
SFSWAP-203ENST00000535236 CALHM3Q86XJ0 350 aa16.21■□□□□ 0.19
SFSWAP-203ENST00000535236 UQCC2Q9BRT2 126 aa16.21■□□□□ 0.19
SFSWAP-203ENST00000535236 SLX4Q8IY92 1834 aa16.21■□□□□ 0.19
SFSWAP-203ENST00000535236 A0A1W2PN81 502 aa16.21■□□□□ 0.18
SFSWAP-203ENST00000535236 M0R296 226 aa16.21■□□□□ 0.18
SFSWAP-203ENST00000535236 ANKRD34CP0C6C1 535 aa16.21■□□□□ 0.18
SFSWAP-203ENST00000535236 CHRNA7P36544 502 aa16.21■□□□□ 0.18
SFSWAP-203ENST00000535236 SUMO1P63165 101 aaKnown RBP16.21■□□□□ 0.18
SFSWAP-203ENST00000535236 LINC00303Q3SY05 128 aa16.21■□□□□ 0.18
SFSWAP-203ENST00000535236 TIGD3Q6B0B8 471 aa16.21■□□□□ 0.18
SFSWAP-203ENST00000535236 DHRS7BQ6IAN0 325 aaPredicted RBP16.21■□□□□ 0.18
SFSWAP-203ENST00000535236 GLCCI1Q86VQ1 547 aa16.21■□□□□ 0.18
SFSWAP-203ENST00000535236 CXXC4Q9H2H0 198 aa16.21■□□□□ 0.18
SFSWAP-203ENST00000535236 LHX9Q9NQ69 397 aa16.21■□□□□ 0.18
SFSWAP-203ENST00000535236 ONECUT2O95948 504 aa16.2■□□□□ 0.18
SFSWAP-203ENST00000535236 C12orf73Q69YU5 71 aa16.2■□□□□ 0.18
SFSWAP-203ENST00000535236 WDR89Q96FK6 387 aaPredicted RBP16.2■□□□□ 0.18
SFSWAP-203ENST00000535236 IL20Q9NYY1 176 aa16.2■□□□□ 0.18
SFSWAP-203ENST00000535236 MEX3AA1L020 520 aaKnown RBP16.2■□□□□ 0.18
SFSWAP-203ENST00000535236 SLC25A5P05141 298 aaKnown RBP16.2■□□□□ 0.18
SFSWAP-203ENST00000535236 OR4A8P0C604 315 aa16.2■□□□□ 0.18
SFSWAP-203ENST00000535236 RAE1P78406 368 aaKnown RBP16.2■□□□□ 0.18
SFSWAP-203ENST00000535236 TMEM267Q0VDI3 215 aaPredicted RBP16.2■□□□□ 0.18
SFSWAP-203ENST00000535236 MRGPRX3Q96LB0 322 aa16.2■□□□□ 0.18
SFSWAP-203ENST00000535236 LURAP1Q96LR2 239 aa16.2■□□□□ 0.18
SFSWAP-203ENST00000535236 CTNNBIP1Q9NSA3 81 aaPredicted RBP16.2■□□□□ 0.18
SFSWAP-203ENST00000535236 C3orf80F5H4A9 247 aa16.2■□□□□ 0.18
SFSWAP-203ENST00000535236 CDX4O14627 284 aaPredicted RBP16.2■□□□□ 0.18
Retrieved 100 of 20,778 RNA–protein pairs in 49.1 ms