RNA–Protein interactions for RNA: ENST00000534356.1

CASP4-213, Transcript of caspase 4, humanhuman

TSL 1 (best)

Gene CASP4, Length 771 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CASP4-213ENST00000534356 PLEKHF2Q9H8W4 249 aa3.96□□□□□ -1.78
CASP4-213ENST00000534356 NXT1Q9UKK6 140 aaKnown RBP3.96□□□□□ -1.78
CASP4-213ENST00000534356 TRAPPC4Q9Y296 219 aa3.96□□□□□ -1.78
CASP4-213ENST00000534356 IGHV3-64DA0A0J9YX35 117 aa3.95□□□□□ -1.78
CASP4-213ENST00000534356 H7C0C1 242 aa3.95□□□□□ -1.78
CASP4-213ENST00000534356 LIN7AO14910 233 aaPredicted RBP3.95□□□□□ -1.78
CASP4-213ENST00000534356 B4GALT2O60909 372 aa3.95□□□□□ -1.78
CASP4-213ENST00000534356 RDH16O75452 317 aa3.95□□□□□ -1.78
CASP4-213ENST00000534356 C1orf105O95561 183 aa3.95□□□□□ -1.78
CASP4-213ENST00000534356 TPM2P07951 284 aa3.95□□□□□ -1.78
CASP4-213ENST00000534356 RALBP11234 206 aa3.95□□□□□ -1.78
CASP4-213ENST00000534356 IL12AP29459 219 aa3.95□□□□□ -1.78
CASP4-213ENST00000534356 ANP32AP39687 249 aaKnown RBP3.95□□□□□ -1.78
CASP4-213ENST00000534356 ATP5OP48047 213 aa3.95□□□□□ -1.78
CASP4-213ENST00000534356 MLF1P58340 268 aa3.95□□□□□ -1.78
CASP4-213ENST00000534356 PSG5Q15238 335 aa3.95□□□□□ -1.78
CASP4-213ENST00000534356 PDZK1Q5T2W1 519 aa3.95□□□□□ -1.78
CASP4-213ENST00000534356 C1orf94Q6P1W5 598 aa3.95□□□□□ -1.78
CASP4-213ENST00000534356 PRMT9Q6P2P2 845 aa3.95□□□□□ -1.78
CASP4-213ENST00000534356 ZNF621Q6ZSS3 439 aa3.95□□□□□ -1.78
CASP4-213ENST00000534356 VN1R4Q7Z5H5 301 aa3.95□□□□□ -1.78
CASP4-213ENST00000534356 RPS19BP1Q86WX3 136 aaKnown RBP3.95□□□□□ -1.78
CASP4-213ENST00000534356 OR51Q1Q8NH59 317 aa3.95□□□□□ -1.78
CASP4-213ENST00000534356 DOK4Q8TEW6 326 aa3.95□□□□□ -1.78
CASP4-213ENST00000534356 RMND5BQ96G75 393 aaPredicted RBP3.95□□□□□ -1.78
CASP4-213ENST00000534356 PRAP1Q96NZ9 151 aa3.95□□□□□ -1.78
CASP4-213ENST00000534356 QKIQ96PU8 341 aaKnown RBP eCLIP3.95□□□□□ -1.78
CASP4-213ENST00000534356 PARD6BQ9BYG5 372 aa3.95□□□□□ -1.78
CASP4-213ENST00000534356 GBA3Q9H227 469 aa3.95□□□□□ -1.78
CASP4-213ENST00000534356 NLE1Q9NVX2 485 aaPredicted RBP3.95□□□□□ -1.78
CASP4-213ENST00000534356 SLC25A37Q9NYZ2 338 aa3.95□□□□□ -1.78
CASP4-213ENST00000534356 KCNIP1Q9NZI2 227 aa3.95□□□□□ -1.78
CASP4-213ENST00000534356 PCYOX1Q9UHG3 505 aa3.95□□□□□ -1.78
CASP4-213ENST00000534356 TMCO1Q9UM00 188 aa3.95□□□□□ -1.78
CASP4-213ENST00000534356 WIF1Q9Y5W5 379 aa3.95□□□□□ -1.78
CASP4-213ENST00000534356 SLC25A15Q9Y619 301 aa3.95□□□□□ -1.78
CASP4-213ENST00000534356 YLPM1P49750 1951 aaKnown RBP3.94□□□□□ -1.78
CASP4-213ENST00000534356 hCG_1818297A0A087WSY0 165 aa3.94□□□□□ -1.78
CASP4-213ENST00000534356 TRAV26-1A0A087WT03 109 aa3.94□□□□□ -1.78
CASP4-213ENST00000534356 GOLGA8KD6RF30 607 aa3.94□□□□□ -1.78
CASP4-213ENST00000534356 GOLGA8TH3BQL2 631 aa3.94□□□□□ -1.78
CASP4-213ENST00000534356 MSNP26038 577 aaKnown RBP3.94□□□□□ -1.78
CASP4-213ENST00000534356 COILP38432 576 aaPredicted RBP3.94□□□□□ -1.78
CASP4-213ENST00000534356 CRISP3P54108 245 aa3.94□□□□□ -1.78
CASP4-213ENST00000534356 CRADDP78560 199 aa3.94□□□□□ -1.78
CASP4-213ENST00000534356 KIAA0087Q14695 138 aa3.94□□□□□ -1.78
CASP4-213ENST00000534356 ACSBG2Q5FVE4 666 aa3.94□□□□□ -1.78
CASP4-213ENST00000534356 CTSL3PQ5NE16 218 aa3.94□□□□□ -1.78
CASP4-213ENST00000534356 PPP1R2P3Q6NXS1 205 aa3.94□□□□□ -1.78
CASP4-213ENST00000534356 ZNF546Q86UE3 836 aa3.94□□□□□ -1.78
CASP4-213ENST00000534356 ZNF321PQ8N8H1 164 aa3.94□□□□□ -1.78
CASP4-213ENST00000534356 ACOT4Q8N9L9 421 aa3.94□□□□□ -1.78
CASP4-213ENST00000534356 OR52K1Q8NGK4 314 aa3.94□□□□□ -1.78
CASP4-213ENST00000534356 OR52M1Q8NGK5 317 aa3.94□□□□□ -1.78
CASP4-213ENST00000534356 ACTL9Q8TC94 416 aa3.94□□□□□ -1.78
CASP4-213ENST00000534356 FAM210BQ96KR6 192 aa3.94□□□□□ -1.78
CASP4-213ENST00000534356 HDHD3Q9BSH5 251 aaPredicted RBP3.94□□□□□ -1.78
CASP4-213ENST00000534356 CAPS2Q9BXY5 557 aa3.94□□□□□ -1.78
CASP4-213ENST00000534356 AICDAQ9GZX7 198 aa3.94□□□□□ -1.78
CASP4-213ENST00000534356 GORASP2Q9H8Y8 452 aa3.94□□□□□ -1.78
CASP4-213ENST00000534356 POLE4Q9NR33 117 aa3.94□□□□□ -1.78
CASP4-213ENST00000534356 TAC3Q9UHF0 121 aa3.94□□□□□ -1.78
CASP4-213ENST00000534356 C4orf51C9J302 202 aa3.93□□□□□ -1.78
CASP4-213ENST00000534356 C12orf77C9JDV5 145 aa3.93□□□□□ -1.78
CASP4-213ENST00000534356 CHST10O43529 356 aa3.93□□□□□ -1.78
CASP4-213ENST00000534356 SNAI2O43623 268 aa3.93□□□□□ -1.78
CASP4-213ENST00000534356 NIPSNAP2O75323 286 aa3.93□□□□□ -1.78
CASP4-213ENST00000534356 FTH1P02794 183 aa3.93□□□□□ -1.78
CASP4-213ENST00000534356 GYPCP04921 128 aa3.93□□□□□ -1.78
CASP4-213ENST00000534356 ANXA5P08758 320 aa3.93□□□□□ -1.78
CASP4-213ENST00000534356 DNASE1L1P49184 302 aa3.93□□□□□ -1.78
CASP4-213ENST00000534356 CCT3P49368 545 aaKnown RBP3.93□□□□□ -1.78
CASP4-213ENST00000534356 CYB561P49447 251 aa3.93□□□□□ -1.78
CASP4-213ENST00000534356 GBX2P52951 348 aaPredicted RBP3.93□□□□□ -1.78
CASP4-213ENST00000534356 OR4D2P58180 307 aa3.93□□□□□ -1.78
CASP4-213ENST00000534356 FGL1Q08830 312 aa3.93□□□□□ -1.78
CASP4-213ENST00000534356 CHIT1Q13231 466 aa3.93□□□□□ -1.78
CASP4-213ENST00000534356 EXOC3L2Q2M3D2 409 aa3.93□□□□□ -1.78
CASP4-213ENST00000534356 KLHL38Q2WGJ6 581 aa3.93□□□□□ -1.78
CASP4-213ENST00000534356 KHDRBS2Q5VWX1 349 aaKnown RBP3.93□□□□□ -1.78
CASP4-213ENST00000534356 MBOAT1Q6ZNC8 495 aa3.93□□□□□ -1.78
CASP4-213ENST00000534356 H2AFVQ71UI9 128 aa3.93□□□□□ -1.78
CASP4-213ENST00000534356 TMEM251Q8N6I4 163 aa3.93□□□□□ -1.78
CASP4-213ENST00000534356 ZFP62Q8NB50 900 aaPredicted RBP3.93□□□□□ -1.78
CASP4-213ENST00000534356 PLPP5Q8NEB5 264 aa3.93□□□□□ -1.78
CASP4-213ENST00000534356 OR2M7Q8NG81 312 aa3.93□□□□□ -1.78
CASP4-213ENST00000534356 MAGEE2Q8TD90 523 aaPredicted RBP3.93□□□□□ -1.78
CASP4-213ENST00000534356 SKA2Q8WVK7 121 aaPredicted RBP3.93□□□□□ -1.78
CASP4-213ENST00000534356 ACOT11Q8WXI4 607 aaPredicted RBP3.93□□□□□ -1.78
CASP4-213ENST00000534356 DRC3Q9H069 523 aa3.93□□□□□ -1.78
CASP4-213ENST00000534356 SPNS1Q9H2V7 528 aa3.93□□□□□ -1.78
CASP4-213ENST00000534356 MRPS30Q9NP92 439 aaKnown RBP3.93□□□□□ -1.78
CASP4-213ENST00000534356 C14orf105Q9NVL8 296 aa3.93□□□□□ -1.78
CASP4-213ENST00000534356 BFARQ9NZS9 450 aa3.93□□□□□ -1.78
CASP4-213ENST00000534356 UVRAGQ9P2Y5 699 aa3.93□□□□□ -1.78
CASP4-213ENST00000534356 IKBKGQ9Y6K9 419 aa3.93□□□□□ -1.78
CASP4-213ENST00000534356 IGLV2-33A0A075B6J2 118 aaPredicted RBP3.92□□□□□ -1.78
CASP4-213ENST00000534356 TRBV11-1A0A0K0K1C0 115 aa3.92□□□□□ -1.78
CASP4-213ENST00000534356 GLSO94925 669 aaPredicted RBP3.92□□□□□ -1.78
CASP4-213ENST00000534356 OR56A5P0C7T3 313 aa3.92□□□□□ -1.78
Retrieved 100 of 20,778 RNA–protein pairs in 29 ms