RNA–Protein interactions for RNA: ENST00000533123.5

SMPD1-208, Transcript of sphingomyelin phosphodiesterase 1, humanhuman

TSL 1 (best)

Gene SMPD1, Length 2,211 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMPD1-208ENST00000533123 STARD10Q9Y365 291 aa15.9■□□□□ 0.14
SMPD1-208ENST00000533123 DOPEY1Q5JWR5 2465 aa15.9■□□□□ 0.14
SMPD1-208ENST00000533123 TRAV18A0A075B6X5 111 aa15.9■□□□□ 0.14
SMPD1-208ENST00000533123 FAM240BA0A1B0GVZ2 78 aa15.9■□□□□ 0.14
SMPD1-208ENST00000533123 GABARAPH6UMI1 98 aa15.9■□□□□ 0.14
SMPD1-208ENST00000533123 CALCRP30988 508 aa15.9■□□□□ 0.14
SMPD1-208ENST00000533123 MNDAP41218 407 aa15.9■□□□□ 0.14
SMPD1-208ENST00000533123 MOGAT2Q3SYC2 334 aa15.9■□□□□ 0.14
SMPD1-208ENST00000533123 CRIP3Q6Q6R5 217 aa15.9■□□□□ 0.14
SMPD1-208ENST00000533123 RFPL4BQ6ZWI9 263 aa15.9■□□□□ 0.14
SMPD1-208ENST00000533123 SSC4DQ8WTU2 575 aa15.9■□□□□ 0.14
SMPD1-208ENST00000533123 APOBEC3DQ96AK3 386 aaPredicted RBP15.9■□□□□ 0.14
SMPD1-208ENST00000533123 DIABLOQ9NR28 239 aa15.9■□□□□ 0.14
SMPD1-208ENST00000533123 IGHV2OR16-5A0A0B4J2B6 119 aa15.89■□□□□ 0.13
SMPD1-208ENST00000533123 VSIG8P0DPA2 414 aa15.89■□□□□ 0.13
SMPD1-208ENST00000533123 BTCP35070 178 aa15.89■□□□□ 0.13
SMPD1-208ENST00000533123 QRFPP83859 136 aa15.89■□□□□ 0.13
SMPD1-208ENST00000533123 NAAAQ02083 359 aa15.89■□□□□ 0.13
SMPD1-208ENST00000533123 KLF9Q13886 244 aaPredicted RBP15.89■□□□□ 0.13
SMPD1-208ENST00000533123 OR5D18Q8NGL1 313 aa15.89■□□□□ 0.13
SMPD1-208ENST00000533123 FCAMRQ8WWV6 532 aa15.89■□□□□ 0.13
SMPD1-208ENST00000533123 PP6455Q8WZ26 134 aa15.89■□□□□ 0.13
SMPD1-208ENST00000533123 PIGTQ969N2 578 aa15.89■□□□□ 0.13
SMPD1-208ENST00000533123 NPDC1Q9NQX5 325 aaPredicted RBP15.89■□□□□ 0.13
SMPD1-208ENST00000533123 GPR173Q9NS66 373 aa15.89■□□□□ 0.13
SMPD1-208ENST00000533123 EIF3KQ9UBQ5 218 aaKnown RBP15.89■□□□□ 0.13
SMPD1-208ENST00000533123 NDRG3Q9UGV2 375 aa15.89■□□□□ 0.13
SMPD1-208ENST00000533123 MRPS28Q9Y2Q9 187 aaKnown RBP15.89■□□□□ 0.13
SMPD1-208ENST00000533123 hCG_38984A0A1B0GV85 526 aa15.88■□□□□ 0.13
SMPD1-208ENST00000533123 HACD4Q5VWC8 232 aa15.88■□□□□ 0.13
SMPD1-208ENST00000533123 GLIPR1L1Q6UWM5 242 aa15.88■□□□□ 0.13
SMPD1-208ENST00000533123 PHF21AQ96BD5 680 aa15.88■□□□□ 0.13
SMPD1-208ENST00000533123 GPER1Q99527 375 aa15.88■□□□□ 0.13
SMPD1-208ENST00000533123 BEX2Q9BXY8 128 aa15.88■□□□□ 0.13
SMPD1-208ENST00000533123 SMPD2O60906 423 aa15.88■□□□□ 0.13
SMPD1-208ENST00000533123 BPNT1O95861 308 aa15.88■□□□□ 0.13
SMPD1-208ENST00000533123 ROS1P08922 2347 aa15.88■□□□□ 0.13
SMPD1-208ENST00000533123 GSK3AP49840 483 aa15.88■□□□□ 0.13
SMPD1-208ENST00000533123 UCP2P55851 309 aa15.88■□□□□ 0.13
SMPD1-208ENST00000533123 GNG2P59768 71 aa15.88■□□□□ 0.13
SMPD1-208ENST00000533123 FAM3AP98173 230 aa15.88■□□□□ 0.13
SMPD1-208ENST00000533123 SORDQ00796 357 aa15.88■□□□□ 0.13
SMPD1-208ENST00000533123 GUCA2AQ02747 115 aa15.88■□□□□ 0.13
SMPD1-208ENST00000533123 KISS1Q15726 138 aa15.88■□□□□ 0.13
SMPD1-208ENST00000533123 C3orf36Q3SXR2 165 aa15.88■□□□□ 0.13
SMPD1-208ENST00000533123 ACBD4Q8NC06 268 aa15.88■□□□□ 0.13
SMPD1-208ENST00000533123 GRPEL2Q8TAA5 225 aa15.88■□□□□ 0.13
SMPD1-208ENST00000533123 UPRTQ96BW1 309 aa15.88■□□□□ 0.13
SMPD1-208ENST00000533123 POFUT1Q9H488 388 aa15.88■□□□□ 0.13
SMPD1-208ENST00000533123 TUBAL3A6NHL2 446 aa15.87■□□□□ 0.13
SMPD1-208ENST00000533123 MT-ND4P03905 459 aa15.87■□□□□ 0.13
SMPD1-208ENST00000533123 ALDOBP05062 364 aa15.87■□□□□ 0.13
SMPD1-208ENST00000533123 RNF224P0DH78 156 aa15.87■□□□□ 0.13
SMPD1-208ENST00000533123 CD40P25942 277 aa15.87■□□□□ 0.13
SMPD1-208ENST00000533123 ERVS71-1P61550 626 aa15.87■□□□□ 0.13
SMPD1-208ENST00000533123 CD83Q01151 205 aa15.87■□□□□ 0.13
SMPD1-208ENST00000533123 RIPPLY1Q0D2K3 151 aa15.87■□□□□ 0.13
SMPD1-208ENST00000533123 HLXQ14774 488 aaPredicted RBP15.87■□□□□ 0.13
SMPD1-208ENST00000533123 SPATA46Q5T0L3 261 aa15.87■□□□□ 0.13
SMPD1-208ENST00000533123 CCDC54Q8NEL0 328 aa15.87■□□□□ 0.13
SMPD1-208ENST00000533123 C1orf147Q96MC9 270 aaPredicted RBP15.87■□□□□ 0.13
SMPD1-208ENST00000533123 ZMAT3Q9HA38 289 aaKnown RBP15.87■□□□□ 0.13
SMPD1-208ENST00000533123 PTTG3PQ9NZH4 202 aa15.87■□□□□ 0.13
SMPD1-208ENST00000533123 PLCE1Q9P212 2302 aa15.87■□□□□ 0.13
SMPD1-208ENST00000533123 CRYAAP02489 173 aa15.87■□□□□ 0.13
SMPD1-208ENST00000533123 PRF1P14222 555 aa15.87■□□□□ 0.13
SMPD1-208ENST00000533123 SLC6A1P30531 599 aa15.87■□□□□ 0.13
SMPD1-208ENST00000533123 GK2Q14410 553 aaPredicted RBP15.87■□□□□ 0.13
SMPD1-208ENST00000533123 PLET1Q6UQ28 207 aa15.87■□□□□ 0.13
SMPD1-208ENST00000533123 TMEM104Q8NE00 496 aa15.87■□□□□ 0.13
SMPD1-208ENST00000533123 DUSP18Q8NEJ0 188 aa15.87■□□□□ 0.13
SMPD1-208ENST00000533123 C10orf35Q96D05 121 aa15.87■□□□□ 0.13
SMPD1-208ENST00000533123 LRRK2Q5S007 2527 aa15.87■□□□□ 0.13
SMPD1-208ENST00000533123 MEIS3P1A6NDR6 274 aa15.86■□□□□ 0.13
SMPD1-208ENST00000533123 DHRS7CA6NNS2 312 aa15.86■□□□□ 0.13
SMPD1-208ENST00000533123 XRCC2O43543 280 aa15.86■□□□□ 0.13
SMPD1-208ENST00000533123 ICMTO60725 284 aa15.86■□□□□ 0.13
SMPD1-208ENST00000533123 RAB6AP20340 208 aa15.86■□□□□ 0.13
SMPD1-208ENST00000533123 TMEM108Q6UXF1 575 aa15.86■□□□□ 0.13
SMPD1-208ENST00000533123 SSX8Q7RTT4 187 aa15.86■□□□□ 0.13
SMPD1-208ENST00000533123 PTX4Q96A99 478 aa15.86■□□□□ 0.13
SMPD1-208ENST00000533123 CMBLQ96DG6 245 aa15.86■□□□□ 0.13
SMPD1-208ENST00000533123 RGCCQ9H4X1 137 aa15.86■□□□□ 0.13
SMPD1-208ENST00000533123 ELF5Q9UKW6 265 aaPredicted RBP15.86■□□□□ 0.13
SMPD1-208ENST00000533123 RAB22AQ9UL26 194 aa15.86■□□□□ 0.13
SMPD1-208ENST00000533123 A0A1W2PP11 408 aa15.86■□□□□ 0.13
SMPD1-208ENST00000533123 DPRXA6NFQ7 191 aa15.86■□□□□ 0.13
SMPD1-208ENST00000533123 WIPF3A6NGB9 483 aa15.86■□□□□ 0.13
SMPD1-208ENST00000533123 HLA-DMAP28067 261 aa15.86■□□□□ 0.13
SMPD1-208ENST00000533123 ARPC4P59998 168 aa15.86■□□□□ 0.13
SMPD1-208ENST00000533123 MRPS10P82664 201 aaKnown RBP15.86■□□□□ 0.13
SMPD1-208ENST00000533123 MALLQ13021 153 aa15.86■□□□□ 0.13
SMPD1-208ENST00000533123 C1QL2Q7Z5L3 287 aa15.86■□□□□ 0.13
SMPD1-208ENST00000533123 PIAS4Q8N2W9 510 aaPredicted RBP15.86■□□□□ 0.13
SMPD1-208ENST00000533123 OR1J1Q8NGS3 322 aa15.86■□□□□ 0.13
SMPD1-208ENST00000533123 UBASH3BQ8TF42 649 aa15.86■□□□□ 0.13
SMPD1-208ENST00000533123 AKAP1Q92667 903 aaKnown RBP eCLIP15.86■□□□□ 0.13
SMPD1-208ENST00000533123 SPSB4Q96A44 273 aa15.86■□□□□ 0.13
SMPD1-208ENST00000533123 OR2J1Q9GZK6 312 aa15.86■□□□□ 0.13
SMPD1-208ENST00000533123 ZNF391Q9UJN7 358 aa15.86■□□□□ 0.13
Retrieved 100 of 20,778 RNA–protein pairs in 40.9 ms