RNA–Protein interactions for RNA: ENST00000532602.1

PCDHA9-202, Transcript of protocadherin alpha 9, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PCDHA9, Length 6,293 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHA9-202ENST00000532602 CHEK1O14757 476 aa13.18□□□□□ -0.3
PCDHA9-202ENST00000532602 DHRS3O75911 302 aa13.18□□□□□ -0.3
PCDHA9-202ENST00000532602 MPZL1O95297 269 aa13.18□□□□□ -0.3
PCDHA9-202ENST00000532602 CD3DP04234 171 aa13.18□□□□□ -0.3
PCDHA9-202ENST00000532602 TGM1P22735 817 aa13.18□□□□□ -0.3
PCDHA9-202ENST00000532602 PEBP1P30086 187 aaKnown RBP13.18□□□□□ -0.3
PCDHA9-202ENST00000532602 MDH2P40926 338 aaKnown RBP13.18□□□□□ -0.3
PCDHA9-202ENST00000532602 SLC22A18ASQ8N1D0 253 aa13.18□□□□□ -0.3
PCDHA9-202ENST00000532602 C2orf50Q96LR7 162 aa13.18□□□□□ -0.3
PCDHA9-202ENST00000532602 DOK1Q99704 481 aa13.18□□□□□ -0.3
PCDHA9-202ENST00000532602 TIMM9Q9Y5J7 89 aa13.18□□□□□ -0.3
PCDHA9-202ENST00000532602 APC2O95996 2303 aa13.18□□□□□ -0.3
PCDHA9-202ENST00000532602 PLXNA1Q9UIW2 1896 aa13.18□□□□□ -0.3
PCDHA9-202ENST00000532602 ZNF32P17041 273 aa13.18□□□□□ -0.3
PCDHA9-202ENST00000532602 M6PRP20645 277 aa13.18□□□□□ -0.3
PCDHA9-202ENST00000532602 EVX1P49640 407 aa13.18□□□□□ -0.3
PCDHA9-202ENST00000532602 MARCH1Q8TCQ1 289 aa13.18□□□□□ -0.3
PCDHA9-202ENST00000532602 RER1O15258 196 aa13.18□□□□□ -0.3
PCDHA9-202ENST00000532602 GOSR1O95249 250 aa13.18□□□□□ -0.3
PCDHA9-202ENST00000532602 PRRX1P54821 245 aa13.18□□□□□ -0.3
PCDHA9-202ENST00000532602 GPR32P1Q8NGA4 272 aa13.18□□□□□ -0.3
PCDHA9-202ENST00000532602 ASB13Q8WXK3 278 aa13.18□□□□□ -0.3
PCDHA9-202ENST00000532602 CTRB1P17538 263 aa13.17□□□□□ -0.3
PCDHA9-202ENST00000532602 ZNF141Q15928 474 aa13.17□□□□□ -0.3
PCDHA9-202ENST00000532602 CTRB2Q6GPI1 263 aa13.17□□□□□ -0.3
PCDHA9-202ENST00000532602 D2HGDHQ8N465 521 aa13.17□□□□□ -0.3
PCDHA9-202ENST00000532602 CCL17Q92583 94 aa13.17□□□□□ -0.3
PCDHA9-202ENST00000532602 TSPAN32Q96QS1 320 aa13.17□□□□□ -0.3
PCDHA9-202ENST00000532602 CYSLTR2Q9NS75 346 aa13.17□□□□□ -0.3
PCDHA9-202ENST00000532602 SNRPGP15A8MWD9 76 aa13.17□□□□□ -0.3
PCDHA9-202ENST00000532602 XRCC3O43542 346 aa13.17□□□□□ -0.3
PCDHA9-202ENST00000532602 IL5P05113 134 aa13.17□□□□□ -0.3
PCDHA9-202ENST00000532602 IAPPP10997 89 aa13.17□□□□□ -0.3
PCDHA9-202ENST00000532602 ZNF774Q6NX45 483 aa13.17□□□□□ -0.3
PCDHA9-202ENST00000532602 GLCCI1Q86VQ1 547 aa13.17□□□□□ -0.3
PCDHA9-202ENST00000532602 OR4S1Q8NGB4 309 aa13.17□□□□□ -0.3
PCDHA9-202ENST00000532602 MCHR2Q969V1 340 aa13.17□□□□□ -0.3
PCDHA9-202ENST00000532602 ERGIC1Q969X5 290 aa13.17□□□□□ -0.3
PCDHA9-202ENST00000532602 TM4SF19Q96DZ7 209 aa13.17□□□□□ -0.3
PCDHA9-202ENST00000532602 UQCC2Q9BRT2 126 aa13.17□□□□□ -0.3
PCDHA9-202ENST00000532602 UBE2MP61081 183 aaKnown RBP13.17□□□□□ -0.3
PCDHA9-202ENST00000532602 MSRB3Q8IXL7 192 aa13.17□□□□□ -0.3
PCDHA9-202ENST00000532602 PARP12Q9H0J9 701 aaKnown RBP13.17□□□□□ -0.3
PCDHA9-202ENST00000532602 UCK1Q9HA47 277 aa13.17□□□□□ -0.3
PCDHA9-202ENST00000532602 CLEC18AA5D8T8 446 aa13.17□□□□□ -0.3
PCDHA9-202ENST00000532602 OR5B21A6NL26 309 aa13.17□□□□□ -0.3
PCDHA9-202ENST00000532602 HIST2H3AQ71DI3 136 aa13.17□□□□□ -0.3
PCDHA9-202ENST00000532602 CLEC18CQ8NCF0 446 aa13.17□□□□□ -0.3
PCDHA9-202ENST00000532602 LILRB4Q8NHJ6 448 aa13.17□□□□□ -0.3
PCDHA9-202ENST00000532602 TRPM6Q9BX84 2022 aa13.17□□□□□ -0.3
PCDHA9-202ENST00000532602 EPXP11678 715 aa13.17□□□□□ -0.3
PCDHA9-202ENST00000532602 SLC25A35Q3KQZ1 300 aa13.17□□□□□ -0.3
PCDHA9-202ENST00000532602 ZNF425Q6IV72 752 aa13.17□□□□□ -0.3
PCDHA9-202ENST00000532602 CLDN23Q96B33 292 aa13.17□□□□□ -0.3
PCDHA9-202ENST00000532602 SF3B5Q9BWJ5 86 aaKnown RBP13.17□□□□□ -0.3
PCDHA9-202ENST00000532602 AVPR2P30518 371 aa13.16□□□□□ -0.3
PCDHA9-202ENST00000532602 ENDOGQ14249 297 aaKnown RBP13.16□□□□□ -0.3
PCDHA9-202ENST00000532602 BTNL8Q6UX41 500 aa13.16□□□□□ -0.3
PCDHA9-202ENST00000532602 FLRT3Q9NZU0 649 aa13.16□□□□□ -0.3
PCDHA9-202ENST00000532602 THYN1Q9P016 225 aa13.16□□□□□ -0.3
PCDHA9-202ENST00000532602 OR4E1P0C645 316 aa13.16□□□□□ -0.3
PCDHA9-202ENST00000532602 CA6P23280 308 aa13.16□□□□□ -0.3
PCDHA9-202ENST00000532602 ZNF768Q9H5H4 540 aaKnown RBP13.16□□□□□ -0.3
PCDHA9-202ENST00000532602 NTN4Q9HB63 628 aa13.16□□□□□ -0.3
PCDHA9-202ENST00000532602 SLC17A5Q9NRA2 495 aa13.16□□□□□ -0.3
PCDHA9-202ENST00000532602 SIRT3Q9NTG7 399 aaPredicted RBP13.16□□□□□ -0.3
PCDHA9-202ENST00000532602 PARP14Q460N5 1801 aa13.16□□□□□ -0.3
PCDHA9-202ENST00000532602 SULT1A3P0DMM9 295 aa13.16□□□□□ -0.3
PCDHA9-202ENST00000532602 SULT1A4P0DMN0 295 aa13.16□□□□□ -0.3
PCDHA9-202ENST00000532602 PLA1AQ53H76 456 aa13.16□□□□□ -0.3
PCDHA9-202ENST00000532602 TOR2AQ5JU69 321 aa13.16□□□□□ -0.3
PCDHA9-202ENST00000532602 LYG2Q86SG7 212 aa13.16□□□□□ -0.3
PCDHA9-202ENST00000532602 PLEKHB1Q9UF11 243 aaPredicted RBP13.16□□□□□ -0.3
PCDHA9-202ENST00000532602 A0A1W2PPV9 198 aa13.16□□□□□ -0.3
PCDHA9-202ENST00000532602 PPP5D1E7EU14 171 aa13.16□□□□□ -0.3
PCDHA9-202ENST00000532602 PPP1CBP62140 327 aa13.16□□□□□ -0.3
PCDHA9-202ENST00000532602 C12orf73Q69YU5 71 aa13.16□□□□□ -0.3
PCDHA9-202ENST00000532602 LCN15Q6UWW0 184 aa13.16□□□□□ -0.3
PCDHA9-202ENST00000532602 SSX8Q7RTT4 187 aa13.16□□□□□ -0.3
PCDHA9-202ENST00000532602 TNFRSF19Q9NS68 423 aa13.16□□□□□ -0.3
PCDHA9-202ENST00000532602 ZNF835Q9Y2P0 537 aa13.16□□□□□ -0.3
PCDHA9-202ENST00000532602 MPC1Q9Y5U8 109 aa13.16□□□□□ -0.3
PCDHA9-202ENST00000532602 OR10V1Q8NGI7 309 aa13.16□□□□□ -0.3
PCDHA9-202ENST00000532602 OIP5O43482 229 aa13.15□□□□□ -0.3
PCDHA9-202ENST00000532602 S100A8P05109 93 aa13.15□□□□□ -0.3
PCDHA9-202ENST00000532602 OR13C7P0DN81 318 aa13.15□□□□□ -0.3
PCDHA9-202ENST00000532602 INSL4Q14641 139 aa13.15□□□□□ -0.3
PCDHA9-202ENST00000532602 ETFRF1Q6IPR1 90 aa13.15□□□□□ -0.3
PCDHA9-202ENST00000532602 ZNF485Q8NCK3 441 aa13.15□□□□□ -0.3
PCDHA9-202ENST00000532602 OR5H6Q8NGV6 325 aa13.15□□□□□ -0.3
PCDHA9-202ENST00000532602 LRRC29Q8WV35 223 aa13.15□□□□□ -0.3
PCDHA9-202ENST00000532602 ASB5Q8WWX0 329 aa13.15□□□□□ -0.3
PCDHA9-202ENST00000532602 GAB2Q9UQC2 676 aa13.15□□□□□ -0.3
PCDHA9-202ENST00000532602 A0A1B0GUH1 482 aa13.15□□□□□ -0.3
PCDHA9-202ENST00000532602 LIMS3P0CW19 117 aa13.15□□□□□ -0.3
PCDHA9-202ENST00000532602 LIMS4P0CW20 117 aa13.15□□□□□ -0.3
PCDHA9-202ENST00000532602 NDUFA6P56556 154 aa13.15□□□□□ -0.3
PCDHA9-202ENST00000532602 FAM162BQ5T6X4 162 aa13.15□□□□□ -0.3
PCDHA9-202ENST00000532602 C20orf196Q8IYI0 205 aa13.15□□□□□ -0.3
PCDHA9-202ENST00000532602 RASL10BQ96S79 203 aa13.15□□□□□ -0.3
Retrieved 100 of 20,778 RNA–protein pairs in 53.9 ms