RNA–Protein interactions for RNA: ENST00000532540.5

TGFBR3-209, Transcript of transforming growth factor beta receptor 3, humanhuman

TSL 1 (best)

Gene TGFBR3, Length 3,913 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TGFBR3-209ENST00000532540 HPNP05981 417 aa6.07□□□□□ -1.44
TGFBR3-209ENST00000532540 CCL4P13236 92 aa6.07□□□□□ -1.44
TGFBR3-209ENST00000532540 PI3P19957 117 aa6.07□□□□□ -1.44
TGFBR3-209ENST00000532540 ZNF136P52737 540 aa6.07□□□□□ -1.44
TGFBR3-209ENST00000532540 LSM6P62312 80 aaKnown RBP6.07□□□□□ -1.44
TGFBR3-209ENST00000532540 LCN6P62502 163 aa6.07□□□□□ -1.44
TGFBR3-209ENST00000532540 PMPCAQ10713 525 aa6.07□□□□□ -1.44
TGFBR3-209ENST00000532540 OR1Q1Q15612 314 aa6.07□□□□□ -1.44
TGFBR3-209ENST00000532540 ZNF750Q32MQ0 723 aa6.07□□□□□ -1.44
TGFBR3-209ENST00000532540 FAHD2BQ6P2I3 314 aaPredicted RBP6.07□□□□□ -1.44
TGFBR3-209ENST00000532540 TSEN54Q7Z6J9 526 aaKnown RBP6.07□□□□□ -1.44
TGFBR3-209ENST00000532540 TMEM183AQ8IXX5 376 aa6.07□□□□□ -1.44
TGFBR3-209ENST00000532540 FAM58AQ8N1B3 248 aa6.07□□□□□ -1.44
TGFBR3-209ENST00000532540 AMER3Q8N944 861 aa6.07□□□□□ -1.44
TGFBR3-209ENST00000532540 ZFP62Q8NB50 900 aaPredicted RBP6.07□□□□□ -1.44
TGFBR3-209ENST00000532540 SLC24A4Q8NFF2 622 aa6.07□□□□□ -1.44
TGFBR3-209ENST00000532540 OR4S1Q8NGB4 309 aa6.07□□□□□ -1.44
TGFBR3-209ENST00000532540 OR4D6Q8NGJ1 314 aa6.07□□□□□ -1.44
TGFBR3-209ENST00000532540 SMIM12Q96EX1 92 aa6.07□□□□□ -1.44
TGFBR3-209ENST00000532540 FAHD2AQ96GK7 314 aa6.07□□□□□ -1.44
TGFBR3-209ENST00000532540 AMDHD1Q96NU7 426 aa6.07□□□□□ -1.44
TGFBR3-209ENST00000532540 ALG12Q9BV10 488 aa6.07□□□□□ -1.44
TGFBR3-209ENST00000532540 STRADBQ9C0K7 418 aa6.07□□□□□ -1.44
TGFBR3-209ENST00000532540 SLC5A7Q9GZV3 580 aa6.07□□□□□ -1.44
TGFBR3-209ENST00000532540 OR51I2Q9H344 312 aa6.07□□□□□ -1.44
TGFBR3-209ENST00000532540 ANKRD10Q9NXR5 420 aa6.07□□□□□ -1.44
TGFBR3-209ENST00000532540 HHLA2Q9UM44 414 aa6.07□□□□□ -1.44
TGFBR3-209ENST00000532540 MED12Q93074 2177 aa6.07□□□□□ -1.44
TGFBR3-209ENST00000532540 PTPRQQ9UMZ3 2332 aa6.07□□□□□ -1.44
TGFBR3-209ENST00000532540 TNFSF12-TNFSF13A0A0A6YY99 330 aa6.07□□□□□ -1.44
TGFBR3-209ENST00000532540 TGIF2-C20orf24A0A0A6YYL0 155 aa6.07□□□□□ -1.44
TGFBR3-209ENST00000532540 A8MWP6 167 aa6.07□□□□□ -1.44
TGFBR3-209ENST00000532540 MKRN2OSH3BPM6 223 aa6.07□□□□□ -1.44
TGFBR3-209ENST00000532540 TNFSF12O43508 249 aa6.07□□□□□ -1.44
TGFBR3-209ENST00000532540 HIST1H2BKO60814 126 aa6.07□□□□□ -1.44
TGFBR3-209ENST00000532540 ALOX12BO75342 701 aa6.07□□□□□ -1.44
TGFBR3-209ENST00000532540 ETHE1O95571 254 aa6.07□□□□□ -1.44
TGFBR3-209ENST00000532540 HLA-HP01893 362 aa6.07□□□□□ -1.44
TGFBR3-209ENST00000532540 HIST1H2BJP06899 126 aa6.07□□□□□ -1.44
TGFBR3-209ENST00000532540 HIST1H2BOP23527 126 aa6.07□□□□□ -1.44
TGFBR3-209ENST00000532540 EPHA8P29322 1005 aaPredicted RBP6.07□□□□□ -1.44
TGFBR3-209ENST00000532540 HIST1H2BBP33778 126 aa6.07□□□□□ -1.44
TGFBR3-209ENST00000532540 HRH1P35367 487 aa6.07□□□□□ -1.44
TGFBR3-209ENST00000532540 DIO1P49895 249 aa6.07□□□□□ -1.44
TGFBR3-209ENST00000532540 TMEM33P57088 247 aa6.07□□□□□ -1.44
TGFBR3-209ENST00000532540 KLF3P57682 345 aaPredicted RBP6.07□□□□□ -1.44
TGFBR3-209ENST00000532540 HIST1H2BDP58876 126 aa6.07□□□□□ -1.44
TGFBR3-209ENST00000532540 KRTDAPP60985 99 aa6.07□□□□□ -1.44
TGFBR3-209ENST00000532540 HIST1H2BCP62807 126 aa6.07□□□□□ -1.44
TGFBR3-209ENST00000532540 TRIP6Q15654 476 aaKnown RBP6.07□□□□□ -1.44
TGFBR3-209ENST00000532540 HIST2H2BEQ16778 126 aa6.07□□□□□ -1.44
TGFBR3-209ENST00000532540 SPIN3Q5JUX0 258 aa6.07□□□□□ -1.44
TGFBR3-209ENST00000532540 HIST2H2BFQ5QNW6 126 aaPredicted RBP6.07□□□□□ -1.44
TGFBR3-209ENST00000532540 SLCO4C1Q6ZQN7 724 aa6.07□□□□□ -1.44
TGFBR3-209ENST00000532540 ZC3HAV1Q7Z2W4 902 aaKnown RBP6.07□□□□□ -1.44
TGFBR3-209ENST00000532540 SLC25A42Q86VD7 318 aa6.07□□□□□ -1.44
TGFBR3-209ENST00000532540 NR2C2APQ86WQ0 139 aa6.07□□□□□ -1.44
TGFBR3-209ENST00000532540 MMP21Q8N119 569 aa6.07□□□□□ -1.44
TGFBR3-209ENST00000532540 LRRC18Q8N456 261 aa6.07□□□□□ -1.44
TGFBR3-209ENST00000532540 SIGLECL1Q8N7X8 197 aa6.07□□□□□ -1.44
TGFBR3-209ENST00000532540 HIST1H2BHQ93079 126 aa6.07□□□□□ -1.44
TGFBR3-209ENST00000532540 ARSGQ96EG1 525 aa6.07□□□□□ -1.44
TGFBR3-209ENST00000532540 HIST1H2BNQ99877 126 aa6.07□□□□□ -1.44
TGFBR3-209ENST00000532540 HIST1H2BMQ99879 126 aa6.07□□□□□ -1.44
TGFBR3-209ENST00000532540 ZFYVE21Q9BQ24 234 aa6.07□□□□□ -1.44
TGFBR3-209ENST00000532540 SMIM7Q9BQ49 75 aa6.07□□□□□ -1.44
TGFBR3-209ENST00000532540 ALKBH7Q9BT30 221 aaPredicted RBP6.07□□□□□ -1.44
TGFBR3-209ENST00000532540 WDR13Q9H1Z4 485 aa6.07□□□□□ -1.44
TGFBR3-209ENST00000532540 ZNF443Q9Y2A4 671 aaPredicted RBP6.07□□□□□ -1.44
TGFBR3-209ENST00000532540 FLVCR1Q9Y5Y0 555 aa6.07□□□□□ -1.44
TGFBR3-209ENST00000532540 B3GALT1Q9Y5Z6 326 aa6.07□□□□□ -1.44
TGFBR3-209ENST00000532540 MED19A0JLT2 244 aaPredicted RBP6.06□□□□□ -1.44
TGFBR3-209ENST00000532540 ST8SIA3O43173 380 aa6.06□□□□□ -1.44
TGFBR3-209ENST00000532540 CSTBP04080 98 aaKnown RBP6.06□□□□□ -1.44
TGFBR3-209ENST00000532540 TK1P04183 234 aa6.06□□□□□ -1.44
TGFBR3-209ENST00000532540 MDKP21741 143 aaPredicted RBP6.06□□□□□ -1.44
TGFBR3-209ENST00000532540 SFTPDP35247 375 aa6.06□□□□□ -1.44
TGFBR3-209ENST00000532540 CDC34P49427 236 aaPredicted RBP6.06□□□□□ -1.44
TGFBR3-209ENST00000532540 TAS2R46P59540 309 aa6.06□□□□□ -1.44
TGFBR3-209ENST00000532540 RPS23P62266 143 aaKnown RBP6.06□□□□□ -1.44
TGFBR3-209ENST00000532540 PRDX1Q06830 199 aaKnown RBP6.06□□□□□ -1.44
TGFBR3-209ENST00000532540 FZD5Q13467 585 aa6.06□□□□□ -1.44
TGFBR3-209ENST00000532540 ENDOGQ14249 297 aaKnown RBP6.06□□□□□ -1.44
TGFBR3-209ENST00000532540 NSDHLQ15738 373 aa6.06□□□□□ -1.44
TGFBR3-209ENST00000532540 PNLIPRP3Q17RR3 467 aa6.06□□□□□ -1.44
TGFBR3-209ENST00000532540 TMEM64Q6YI46 380 aa6.06□□□□□ -1.44
TGFBR3-209ENST00000532540 ZNF836Q6ZNA1 936 aa6.06□□□□□ -1.44
TGFBR3-209ENST00000532540 GATSQ8NAP1 163 aa6.06□□□□□ -1.44
TGFBR3-209ENST00000532540 GPBAR1Q8TDU6 330 aa6.06□□□□□ -1.44
TGFBR3-209ENST00000532540 ZDHHC19Q8WVZ1 309 aaPredicted RBP6.06□□□□□ -1.44
TGFBR3-209ENST00000532540 CLDN23Q96B33 292 aa6.06□□□□□ -1.44
TGFBR3-209ENST00000532540 BORCS7Q96B45 105 aa6.06□□□□□ -1.44
TGFBR3-209ENST00000532540 RBMXL1Q96E39 390 aaKnown RBP6.06□□□□□ -1.44
TGFBR3-209ENST00000532540 SEH1LQ96EE3 360 aa6.06□□□□□ -1.44
TGFBR3-209ENST00000532540 NUDT11Q96G61 164 aa6.06□□□□□ -1.44
TGFBR3-209ENST00000532540 HIST1H2AAQ96QV6 131 aa6.06□□□□□ -1.44
TGFBR3-209ENST00000532540 DMRTA2Q96SC8 542 aa6.06□□□□□ -1.44
TGFBR3-209ENST00000532540 NKX3-1Q99801 234 aaPredicted RBP6.06□□□□□ -1.44
TGFBR3-209ENST00000532540 RAB11FIP5Q9BXF6 653 aa6.06□□□□□ -1.44
TGFBR3-209ENST00000532540 BCL2L10Q9HD36 194 aa6.06□□□□□ -1.44
Retrieved 100 of 20,778 RNA–protein pairs in 36.6 ms