RNA–Protein interactions for RNA: ENST00000532339.1

CD44-235, Transcript of CD44 molecule (Indian blood group), humanhuman

TSL 2

Gene CD44, Length 589 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CD44-235ENST00000532339 PPIDQ08752 370 aaKnown RBP2.69□□□□□ -1.98
CD44-235ENST00000532339 GRB7Q14451 532 aa2.69□□□□□ -1.98
CD44-235ENST00000532339 PON3Q15166 354 aa2.69□□□□□ -1.98
CD44-235ENST00000532339 STK11Q15831 433 aa2.69□□□□□ -1.98
CD44-235ENST00000532339 DPYSL2Q16555 572 aa2.69□□□□□ -1.98
CD44-235ENST00000532339 DEFB112Q30KQ8 113 aa2.69□□□□□ -1.98
CD44-235ENST00000532339 NSUN5P1Q3KNT7 163 aa2.69□□□□□ -1.98
CD44-235ENST00000532339 KCTD21Q4G0X4 260 aa2.69□□□□□ -1.98
CD44-235ENST00000532339 CTSL3PQ5NE16 218 aa2.69□□□□□ -1.98
CD44-235ENST00000532339 METTL11BQ5VVY1 283 aa2.69□□□□□ -1.98
CD44-235ENST00000532339 UQCC3Q6UW78 93 aa2.69□□□□□ -1.98
CD44-235ENST00000532339 Q6ZVH6 145 aa2.69□□□□□ -1.98
CD44-235ENST00000532339 TAS2R42Q7RTR8 314 aa2.69□□□□□ -1.98
CD44-235ENST00000532339 BHLHA15Q7RTS1 189 aaPredicted RBP2.69□□□□□ -1.98
CD44-235ENST00000532339 NDUFA11Q86Y39 141 aa2.69□□□□□ -1.98
CD44-235ENST00000532339 CCDC50Q8IVM0 306 aa2.69□□□□□ -1.98
CD44-235ENST00000532339 SBSPONQ8IVN8 264 aa2.69□□□□□ -1.98
CD44-235ENST00000532339 WDFY1Q8IWB7 410 aa2.69□□□□□ -1.98
CD44-235ENST00000532339 RIBC1Q8N443 379 aaPredicted RBP2.69□□□□□ -1.98
CD44-235ENST00000532339 FAM184AQ8NB25 1140 aa2.69□□□□□ -1.98
CD44-235ENST00000532339 DEFB108BQ8NET1 73 aa2.69□□□□□ -1.98
CD44-235ENST00000532339 OR1L4Q8NGR5 311 aa2.69□□□□□ -1.98
CD44-235ENST00000532339 EFHD2Q96C19 240 aaPredicted RBP2.69□□□□□ -1.98
CD44-235ENST00000532339 C10orf35Q96D05 121 aa2.69□□□□□ -1.98
CD44-235ENST00000532339 TIMD4Q96H15 378 aa2.69□□□□□ -1.98
CD44-235ENST00000532339 TPD52L3Q96J77 140 aa2.69□□□□□ -1.98
CD44-235ENST00000532339 MS4A14Q96JA4 679 aa2.69□□□□□ -1.98
CD44-235ENST00000532339 LINC00167Q96N53 147 aa2.69□□□□□ -1.98
CD44-235ENST00000532339 RILPQ96NA2 401 aa2.69□□□□□ -1.98
CD44-235ENST00000532339 PAXXQ9BUH6 204 aa2.69□□□□□ -1.98
CD44-235ENST00000532339 RNF126Q9BV68 326 aa2.69□□□□□ -1.98
CD44-235ENST00000532339 POLE4Q9NR33 117 aa2.69□□□□□ -1.98
CD44-235ENST00000532339 NANSQ9NR45 359 aa2.69□□□□□ -1.98
CD44-235ENST00000532339 PHF11Q9UIL8 331 aa2.69□□□□□ -1.98
CD44-235ENST00000532339 PRPF19Q9UMS4 504 aaKnown RBP2.69□□□□□ -1.98
CD44-235ENST00000532339 LRP2P98164 4655 aa2.68□□□□□ -1.98
CD44-235ENST00000532339 A0A1W2PPE3 182 aa2.68□□□□□ -1.98
CD44-235ENST00000532339 BTBD17A6NE02 478 aa2.68□□□□□ -1.98
CD44-235ENST00000532339 ZNF860A6NHJ4 632 aa2.68□□□□□ -1.98
CD44-235ENST00000532339 DHRS7CA6NNS2 312 aa2.68□□□□□ -1.98
CD44-235ENST00000532339 ZNF716A6NP11 495 aa2.68□□□□□ -1.98
CD44-235ENST00000532339 LYNX1G3V0Z9 82 aa2.68□□□□□ -1.98
CD44-235ENST00000532339 TP53I11O14683 189 aa2.68□□□□□ -1.98
CD44-235ENST00000532339 RGS16O15492 202 aaPredicted RBP2.68□□□□□ -1.98
CD44-235ENST00000532339 POLR2DO15514 142 aaKnown RBP2.68□□□□□ -1.98
CD44-235ENST00000532339 CDH16O75309 829 aa2.68□□□□□ -1.98
CD44-235ENST00000532339 DEDDO75618 318 aa2.68□□□□□ -1.98
CD44-235ENST00000532339 ATP5LO75964 103 aa2.68□□□□□ -1.98
CD44-235ENST00000532339 AQP8O94778 261 aa2.68□□□□□ -1.98
CD44-235ENST00000532339 ZNF735P0CB33 412 aa2.68□□□□□ -1.98
CD44-235ENST00000532339 LYNX1P0DP58 116 aa2.68□□□□□ -1.98
CD44-235ENST00000532339 ATP1B2P14415 290 aaPredicted RBP2.68□□□□□ -1.98
CD44-235ENST00000532339 ZNF17P17021 662 aa2.68□□□□□ -1.98
CD44-235ENST00000532339 NCF2P19878 526 aaPredicted RBP2.68□□□□□ -1.98
CD44-235ENST00000532339 COX5AP20674 150 aa2.68□□□□□ -1.98
CD44-235ENST00000532339 ZP3P21754 424 aa2.68□□□□□ -1.98
CD44-235ENST00000532339 VDAC1P21796 283 aa2.68□□□□□ -1.98
CD44-235ENST00000532339 PTGDSP41222 190 aa2.68□□□□□ -1.98
CD44-235ENST00000532339 HNRNPA3P51991 378 aaKnown RBP2.68□□□□□ -1.98
CD44-235ENST00000532339 SKP1P63208 163 aa2.68□□□□□ -1.98
CD44-235ENST00000532339 ASPHQ12797 758 aa2.68□□□□□ -1.98
CD44-235ENST00000532339 C6orf226Q5I0X4 101 aa2.68□□□□□ -1.98
CD44-235ENST00000532339 NIPAL1Q6NVV3 410 aa2.68□□□□□ -1.98
CD44-235ENST00000532339 TRIM40Q6P9F5 258 aa2.68□□□□□ -1.98
CD44-235ENST00000532339 EGFL6Q8IUX8 553 aa2.68□□□□□ -1.98
CD44-235ENST00000532339 MTURNQ8N3F0 131 aa2.68□□□□□ -1.98
CD44-235ENST00000532339 ATPAF2Q8N5M1 289 aa2.68□□□□□ -1.98
CD44-235ENST00000532339 MORN4Q8NDC4 146 aa2.68□□□□□ -1.98
CD44-235ENST00000532339 OR5T3Q8NGG3 340 aa2.68□□□□□ -1.98
CD44-235ENST00000532339 OR1J4Q8NGS1 313 aa2.68□□□□□ -1.98
CD44-235ENST00000532339 OR13F1Q8NGS4 319 aa2.68□□□□□ -1.98
CD44-235ENST00000532339 OR56B4Q8NH76 319 aa2.68□□□□□ -1.98
CD44-235ENST00000532339 NUBPLQ8TB37 319 aa2.68□□□□□ -1.98
CD44-235ENST00000532339 UBE2E3Q969T4 207 aa2.68□□□□□ -1.98
CD44-235ENST00000532339 TRIB3Q96RU7 358 aa2.68□□□□□ -1.98
CD44-235ENST00000532339 LLPHQ9BRT6 129 aaKnown RBP2.68□□□□□ -1.98
CD44-235ENST00000532339 CHRDL1Q9BU40 450 aa2.68□□□□□ -1.98
CD44-235ENST00000532339 SRXN1Q9BYN0 137 aa2.68□□□□□ -1.98
CD44-235ENST00000532339 STMN4Q9H169 189 aaPredicted RBP2.68□□□□□ -1.98
CD44-235ENST00000532339 TRABDQ9H4I3 376 aa2.68□□□□□ -1.98
CD44-235ENST00000532339 FOLH1BQ9HBA9 442 aa2.68□□□□□ -1.98
CD44-235ENST00000532339 GLRX2Q9NS18 164 aa2.68□□□□□ -1.98
CD44-235ENST00000532339 PCYOX1Q9UHG3 505 aa2.68□□□□□ -1.98
CD44-235ENST00000532339 IFT52Q9Y366 437 aa2.68□□□□□ -1.98
CD44-235ENST00000532339 MMACHCQ9Y4U1 282 aa2.68□□□□□ -1.98
CD44-235ENST00000532339 FLVCR1Q9Y5Y0 555 aa2.68□□□□□ -1.98
CD44-235ENST00000532339 SOX21Q9Y651 276 aaPredicted RBP2.68□□□□□ -1.98
CD44-235ENST00000532339 SLC22A7Q9Y694 548 aa2.68□□□□□ -1.98
CD44-235ENST00000532339 IGLV8-61A0A075B6I0 122 aa2.67□□□□□ -1.98
CD44-235ENST00000532339 IGHV1OR15-1A0A075B7D0 117 aa2.67□□□□□ -1.98
CD44-235ENST00000532339 KCNE1BA0A087WTH5 132 aa2.67□□□□□ -1.98
CD44-235ENST00000532339 IGKV1-8A0A0C4DH67 115 aa2.67□□□□□ -1.98
CD44-235ENST00000532339 A0A1W2PPV9 198 aa2.67□□□□□ -1.98
CD44-235ENST00000532339 OR5H1A6NKK0 313 aa2.67□□□□□ -1.98
CD44-235ENST00000532339 E7ESA3 106 aa2.67□□□□□ -1.98
CD44-235ENST00000532339 H0YHG0 523 aa2.67□□□□□ -1.98
CD44-235ENST00000532339 PSMD12O00232 456 aaPredicted RBP2.67□□□□□ -1.98
CD44-235ENST00000532339 CHST10O43529 356 aa2.67□□□□□ -1.98
CD44-235ENST00000532339 CBR3O75828 277 aa2.67□□□□□ -1.98
CD44-235ENST00000532339 LALBAP00709 142 aa2.67□□□□□ -1.98
Retrieved 100 of 20,778 RNA–protein pairs in 78.9 ms