RNA–Protein interactions for RNA: ENST00000526000.5

CD44-221, Transcript of CD44 molecule (Indian blood group), humanhuman

TSL 5

Gene CD44, Length 722 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CD44-221ENST00000526000 A0A1W2PRX2 142 aa5.37□□□□□ -1.55
CD44-221ENST00000526000 MEX3AA1L020 520 aaKnown RBP5.37□□□□□ -1.55
CD44-221ENST00000526000 ZNF850A8MQ14 1090 aa5.37□□□□□ -1.55
CD44-221ENST00000526000 PRR23D1E9PI22 279 aaPredicted RBP5.37□□□□□ -1.55
CD44-221ENST00000526000 ZNF593O00488 134 aaPredicted RBP5.37□□□□□ -1.55
CD44-221ENST00000526000 GPR37O15354 613 aa5.37□□□□□ -1.55
CD44-221ENST00000526000 ANGPTL7O43827 346 aa5.37□□□□□ -1.55
CD44-221ENST00000526000 MITFO75030 526 aaPredicted RBP5.37□□□□□ -1.55
CD44-221ENST00000526000 MPIG6BO95866 241 aa5.37□□□□□ -1.55
CD44-221ENST00000526000 OPN1MWP04001 364 aa5.37□□□□□ -1.55
CD44-221ENST00000526000 PRR23D2P0DMB1 279 aaPredicted RBP5.37□□□□□ -1.55
CD44-221ENST00000526000 OPN1MW2P0DN77 364 aa5.37□□□□□ -1.55
CD44-221ENST00000526000 OPN1MW3P0DN78 364 aa5.37□□□□□ -1.55
CD44-221ENST00000526000 CD28P10747 220 aa5.37□□□□□ -1.55
CD44-221ENST00000526000 CLUP10909 449 aa5.37□□□□□ -1.55
CD44-221ENST00000526000 CAPGP40121 348 aa5.37□□□□□ -1.55
CD44-221ENST00000526000 TGM4P49221 684 aa5.37□□□□□ -1.55
CD44-221ENST00000526000 CAPZA1P52907 286 aa5.37□□□□□ -1.55
CD44-221ENST00000526000 LOXL3P58215 753 aa5.37□□□□□ -1.55
CD44-221ENST00000526000 SNRPGP62308 76 aaKnown RBP5.37□□□□□ -1.55
CD44-221ENST00000526000 EFNB1P98172 346 aa5.37□□□□□ -1.55
CD44-221ENST00000526000 SNCBQ16143 134 aa5.37□□□□□ -1.55
CD44-221ENST00000526000 TIGD6Q17RP2 521 aa5.37□□□□□ -1.55
CD44-221ENST00000526000 LRRC10Q5BKY1 277 aa5.37□□□□□ -1.55
CD44-221ENST00000526000 DEFB121Q5J5C9 76 aa5.37□□□□□ -1.55
CD44-221ENST00000526000 LCN1P1Q5VSP4 162 aa5.37□□□□□ -1.55
CD44-221ENST00000526000 TEX36Q5VZQ5 186 aa5.37□□□□□ -1.55
CD44-221ENST00000526000 LPCAT4Q643R3 524 aa5.37□□□□□ -1.55
CD44-221ENST00000526000 WDR82Q6UXN9 313 aa5.37□□□□□ -1.55
CD44-221ENST00000526000 SLC16A9Q7RTY1 509 aa5.37□□□□□ -1.55
CD44-221ENST00000526000 SLC36A1Q7Z2H8 476 aa5.37□□□□□ -1.55
CD44-221ENST00000526000 EGFL6Q8IUX8 553 aa5.37□□□□□ -1.55
CD44-221ENST00000526000 FAM185AQ8N0U4 392 aa5.37□□□□□ -1.55
CD44-221ENST00000526000 GALNT4Q8N4A0 578 aa5.37□□□□□ -1.55
CD44-221ENST00000526000 SPERTQ8NA61 448 aa5.37□□□□□ -1.55
CD44-221ENST00000526000 SLC37A3Q8NCC5 494 aa5.37□□□□□ -1.55
CD44-221ENST00000526000 OR4Q3Q8NH05 313 aa5.37□□□□□ -1.55
CD44-221ENST00000526000 TMEM163Q8TC26 289 aa5.37□□□□□ -1.55
CD44-221ENST00000526000 PIGCQ92535 297 aa5.37□□□□□ -1.55
CD44-221ENST00000526000 TNFRSF14Q92956 283 aa5.37□□□□□ -1.55
CD44-221ENST00000526000 RFKQ969G6 155 aa5.37□□□□□ -1.55
CD44-221ENST00000526000 OTULINQ96BN8 352 aa5.37□□□□□ -1.55
CD44-221ENST00000526000 SLAMF6Q96DU3 332 aa5.37□□□□□ -1.55
CD44-221ENST00000526000 DDOQ99489 341 aa5.37□□□□□ -1.55
CD44-221ENST00000526000 KCNJ15Q99712 375 aa5.37□□□□□ -1.55
CD44-221ENST00000526000 DCTN5Q9BTE1 182 aa5.37□□□□□ -1.55
CD44-221ENST00000526000 ADI1Q9BV57 179 aa5.37□□□□□ -1.55
CD44-221ENST00000526000 NMNAT2Q9BZQ4 307 aa5.37□□□□□ -1.55
CD44-221ENST00000526000 MMP28Q9H239 520 aa5.37□□□□□ -1.55
CD44-221ENST00000526000 Q9H521 79 aa5.37□□□□□ -1.55
CD44-221ENST00000526000 SP140LQ9H930 580 aa5.37□□□□□ -1.55
CD44-221ENST00000526000 TRIM36Q9NQ86 728 aa5.37□□□□□ -1.55
CD44-221ENST00000526000 FAM118AQ9NWS6 357 aa5.37□□□□□ -1.55
CD44-221ENST00000526000 IMPAD1Q9NX62 359 aa5.37□□□□□ -1.55
CD44-221ENST00000526000 TVP23BQ9NYZ1 205 aa5.37□□□□□ -1.55
CD44-221ENST00000526000 MRPL15Q9P015 296 aaKnown RBP5.37□□□□□ -1.55
CD44-221ENST00000526000 H2AFY2Q9P0M6 372 aaPredicted RBP5.37□□□□□ -1.55
CD44-221ENST00000526000 ZNF319Q9P2F9 582 aa5.37□□□□□ -1.55
CD44-221ENST00000526000 FBLN5Q9UBX5 448 aa5.37□□□□□ -1.55
CD44-221ENST00000526000 RAB26Q9ULW5 256 aa5.37□□□□□ -1.55
CD44-221ENST00000526000 NOP16Q9Y3C1 178 aaKnown RBP5.37□□□□□ -1.55
CD44-221ENST00000526000 ANKHD1-EIF4EBP3H7C0V5 636 aaPredicted RBP5.36□□□□□ -1.55
CD44-221ENST00000526000 DLGAP1O14490 977 aa5.36□□□□□ -1.55
CD44-221ENST00000526000 GLCEO94923 617 aa5.36□□□□□ -1.55
CD44-221ENST00000526000 PTBP3O95758 552 aaKnown RBP5.36□□□□□ -1.55
CD44-221ENST00000526000 MUC1P15941 1255 aaPredicted RBP5.36□□□□□ -1.55
CD44-221ENST00000526000 COX7A1P24310 79 aa5.36□□□□□ -1.55
CD44-221ENST00000526000 FMO3P31513 532 aa5.36□□□□□ -1.55
CD44-221ENST00000526000 GNALP38405 381 aa5.36□□□□□ -1.55
CD44-221ENST00000526000 NAA10P41227 235 aaPredicted RBP5.36□□□□□ -1.55
CD44-221ENST00000526000 CX3CR1P49238 355 aa5.36□□□□□ -1.55
CD44-221ENST00000526000 GSK3AP49840 483 aa5.36□□□□□ -1.55
CD44-221ENST00000526000 BMXP51813 675 aa5.36□□□□□ -1.55
CD44-221ENST00000526000 EFNB2P52799 333 aa5.36□□□□□ -1.55
CD44-221ENST00000526000 RPL15P61313 204 aaKnown RBP5.36□□□□□ -1.55
CD44-221ENST00000526000 ADARB1P78563 741 aaKnown RBP5.36□□□□□ -1.55
CD44-221ENST00000526000 FAM3AP98173 230 aa5.36□□□□□ -1.55
CD44-221ENST00000526000 GUCA2AQ02747 115 aa5.36□□□□□ -1.55
CD44-221ENST00000526000 MZT1Q08AG7 82 aa5.36□□□□□ -1.55
CD44-221ENST00000526000 CRMP1Q14194 572 aa5.36□□□□□ -1.55
CD44-221ENST00000526000 EIF2B1Q14232 305 aaKnown RBP5.36□□□□□ -1.55
CD44-221ENST00000526000 DGUOKQ16854 277 aa5.36□□□□□ -1.55
CD44-221ENST00000526000 LRRC36Q1X8D7 754 aa5.36□□□□□ -1.55
CD44-221ENST00000526000 NXNL2Q5VZ03 156 aa5.36□□□□□ -1.55
CD44-221ENST00000526000 DRAM2Q6UX65 266 aa5.36□□□□□ -1.55
CD44-221ENST00000526000 CCBE1Q6UXH8 406 aaPredicted RBP5.36□□□□□ -1.55
CD44-221ENST00000526000 SHFQ7M4L6 423 aa5.36□□□□□ -1.55
CD44-221ENST00000526000 MKXQ8IYA7 352 aa5.36□□□□□ -1.55
CD44-221ENST00000526000 C8orf59Q8N0T1 100 aaPredicted RBP5.36□□□□□ -1.55
CD44-221ENST00000526000 BATF2Q8N1L9 274 aa5.36□□□□□ -1.55
CD44-221ENST00000526000 PLPP7Q8NBV4 271 aa5.36□□□□□ -1.55
CD44-221ENST00000526000 ZNRF1Q8ND25 227 aa5.36□□□□□ -1.55
CD44-221ENST00000526000 TMEM185AQ8NFB2 350 aa5.36□□□□□ -1.55
CD44-221ENST00000526000 OR51G2Q8NGK0 314 aa5.36□□□□□ -1.55
CD44-221ENST00000526000 RHOXF1Q8NHV9 184 aa5.36□□□□□ -1.55
CD44-221ENST00000526000 FAM81AQ8TBF8 368 aa5.36□□□□□ -1.55
CD44-221ENST00000526000 TFAP2CQ92754 450 aa5.36□□□□□ -1.55
CD44-221ENST00000526000 R3HDM4Q96D70 268 aa5.36□□□□□ -1.55
CD44-221ENST00000526000 REEP6Q96HR9 211 aa5.36□□□□□ -1.55
CD44-221ENST00000526000 PGAM5Q96HS1 289 aa5.36□□□□□ -1.55
Retrieved 100 of 20,778 RNA–protein pairs in 58.8 ms