RNA–Protein interactions for RNA: ENST00000523441.1

SDCBP-211, Transcript of syndecan binding protein, humanhuman

TSL 2

Gene SDCBP, Length 543 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SDCBP-211ENST00000523441 LIPEQ05469 1076 aa9.3□□□□□ -0.92
SDCBP-211ENST00000523441 ETV3LQ6ZN32 361 aa9.3□□□□□ -0.92
SDCBP-211ENST00000523441 C8orf86Q6ZUL3 223 aa9.3□□□□□ -0.92
SDCBP-211ENST00000523441 CBLL1Q75N03 491 aa9.3□□□□□ -0.92
SDCBP-211ENST00000523441 ZDHHC23Q8IYP9 409 aa9.3□□□□□ -0.92
SDCBP-211ENST00000523441 C11orf42Q8N5U0 333 aa9.3□□□□□ -0.92
SDCBP-211ENST00000523441 CD177Q8N6Q3 437 aa9.3□□□□□ -0.92
SDCBP-211ENST00000523441 CSNK2A3Q8NEV1 391 aa9.3□□□□□ -0.92
SDCBP-211ENST00000523441 OR13D1Q8NGV5 346 aa9.3□□□□□ -0.92
SDCBP-211ENST00000523441 SPSB4Q96A44 273 aa9.3□□□□□ -0.92
SDCBP-211ENST00000523441 OR10A2Q9H208 303 aa9.3□□□□□ -0.92
SDCBP-211ENST00000523441 EGLN3Q9H6Z9 239 aa9.3□□□□□ -0.92
SDCBP-211ENST00000523441 GID8Q9NWU2 228 aa9.3□□□□□ -0.92
SDCBP-211ENST00000523441 CMTM6Q9NX76 183 aa9.3□□□□□ -0.92
SDCBP-211ENST00000523441 ZNF222Q9UK12 451 aa9.3□□□□□ -0.92
SDCBP-211ENST00000523441 DNAH1Q9P2D7 4330 aa9.3□□□□□ -0.92
SDCBP-211ENST00000523441 DHRS12A0PJE2 317 aa9.29□□□□□ -0.92
SDCBP-211ENST00000523441 FAM90A8PA6NJQ4 464 aa9.29□□□□□ -0.92
SDCBP-211ENST00000523441 TMEM210A6NLX4 147 aa9.29□□□□□ -0.92
SDCBP-211ENST00000523441 H0YHG0 523 aa9.29□□□□□ -0.92
SDCBP-211ENST00000523441 SLC1A7O00341 560 aa9.29□□□□□ -0.92
SDCBP-211ENST00000523441 SLC22A2O15244 555 aa9.29□□□□□ -0.92
SDCBP-211ENST00000523441 CLUP10909 449 aa9.29□□□□□ -0.92
SDCBP-211ENST00000523441 ACKR3P25106 362 aa9.29□□□□□ -0.92
SDCBP-211ENST00000523441 FMO3P31513 532 aa9.29□□□□□ -0.92
SDCBP-211ENST00000523441 SLC15A1P46059 708 aa9.29□□□□□ -0.92
SDCBP-211ENST00000523441 LUMP51884 338 aaPredicted RBP9.29□□□□□ -0.92
SDCBP-211ENST00000523441 KRT72Q14CN4 511 aa9.29□□□□□ -0.92
SDCBP-211ENST00000523441 HAGHLQ6PII5 290 aaPredicted RBP9.29□□□□□ -0.92
SDCBP-211ENST00000523441 ZNF329Q86UD4 541 aa9.29□□□□□ -0.92
SDCBP-211ENST00000523441 FTMTQ8N4E7 242 aa9.29□□□□□ -0.92
SDCBP-211ENST00000523441 OR51D1Q8NGF3 324 aa9.29□□□□□ -0.92
SDCBP-211ENST00000523441 OR2T4Q8NH00 348 aa9.29□□□□□ -0.92
SDCBP-211ENST00000523441 HPSE2Q8WWQ2 592 aa9.29□□□□□ -0.92
SDCBP-211ENST00000523441 MALSU1Q96EH3 234 aa9.29□□□□□ -0.92
SDCBP-211ENST00000523441 ANKRD19PQ9H560 264 aa9.29□□□□□ -0.92
SDCBP-211ENST00000523441 TAS2R1Q9NYW7 299 aa9.29□□□□□ -0.92
SDCBP-211ENST00000523441 TBL2Q9Y4P3 447 aaKnown RBP9.29□□□□□ -0.92
SDCBP-211ENST00000523441 MPC1Q9Y5U8 109 aa9.29□□□□□ -0.92
SDCBP-211ENST00000523441 A0A1W2PRQ8 180 aa9.28□□□□□ -0.92
SDCBP-211ENST00000523441 ARPC3O15145 178 aa9.28□□□□□ -0.92
SDCBP-211ENST00000523441 LYL1P12980 280 aa9.28□□□□□ -0.92
SDCBP-211ENST00000523441 PRDX2P32119 198 aa9.28□□□□□ -0.92
SDCBP-211ENST00000523441 ECI1P42126 302 aa9.28□□□□□ -0.92
SDCBP-211ENST00000523441 EDDM3BP56851 147 aa9.28□□□□□ -0.92
SDCBP-211ENST00000523441 GRB2P62993 217 aaKnown RBP9.28□□□□□ -0.92
SDCBP-211ENST00000523441 KLF10Q13118 480 aa9.28□□□□□ -0.92
SDCBP-211ENST00000523441 DGCR6Q14129 220 aa9.28□□□□□ -0.92
SDCBP-211ENST00000523441 MOB3CQ70IA8 216 aa9.28□□□□□ -0.92
SDCBP-211ENST00000523441 OR52H1Q8NGJ2 320 aa9.28□□□□□ -0.92
SDCBP-211ENST00000523441 OR6N2Q8NGY6 317 aa9.28□□□□□ -0.92
SDCBP-211ENST00000523441 FAM81AQ8TBF8 368 aa9.28□□□□□ -0.92
SDCBP-211ENST00000523441 STMN2Q93045 179 aa9.28□□□□□ -0.92
SDCBP-211ENST00000523441 OTULINQ96BN8 352 aa9.28□□□□□ -0.92
SDCBP-211ENST00000523441 RCN3Q96D15 328 aa9.28□□□□□ -0.92
SDCBP-211ENST00000523441 SLC25A33Q9BSK2 321 aa9.28□□□□□ -0.92
SDCBP-211ENST00000523441 NDUFAF4Q9P032 175 aa9.28□□□□□ -0.92
SDCBP-211ENST00000523441 LCE6AA0A183 80 aa9.27□□□□□ -0.93
SDCBP-211ENST00000523441 ODF3BA8MYP8 253 aa9.27□□□□□ -0.93
SDCBP-211ENST00000523441 H3BUI4 141 aa9.27□□□□□ -0.93
SDCBP-211ENST00000523441 INMTO95050 263 aa9.27□□□□□ -0.93
SDCBP-211ENST00000523441 LY86O95711 162 aa9.27□□□□□ -0.93
SDCBP-211ENST00000523441 SNRNP70P08621 437 aaKnown RBP9.27□□□□□ -0.93
SDCBP-211ENST00000523441 H2BFMP0C1H6 154 aa9.27□□□□□ -0.93
SDCBP-211ENST00000523441 CFL1P23528 166 aaKnown RBP9.27□□□□□ -0.93
SDCBP-211ENST00000523441 DCTDP32321 178 aa9.27□□□□□ -0.93
SDCBP-211ENST00000523441 THBS3P49746 956 aa9.27□□□□□ -0.93
SDCBP-211ENST00000523441 NUDT2P50583 147 aa9.27□□□□□ -0.93
SDCBP-211ENST00000523441 ACTA2P62736 377 aa9.27□□□□□ -0.93
SDCBP-211ENST00000523441 ACTG2P63267 376 aa9.27□□□□□ -0.93
SDCBP-211ENST00000523441 ACTC1P68032 377 aa9.27□□□□□ -0.93
SDCBP-211ENST00000523441 ACTA1P68133 377 aa9.27□□□□□ -0.93
SDCBP-211ENST00000523441 ACP7Q6ZNF0 438 aa9.27□□□□□ -0.93
SDCBP-211ENST00000523441 PIGWQ7Z7B1 504 aa9.27□□□□□ -0.93
SDCBP-211ENST00000523441 COMMD2Q86X83 199 aa9.27□□□□□ -0.93
SDCBP-211ENST00000523441 ERI1Q8IV48 349 aaKnown RBP9.27□□□□□ -0.93
SDCBP-211ENST00000523441 FAM86B1Q8N7N1 296 aa9.27□□□□□ -0.93
SDCBP-211ENST00000523441 ASCC1Q8N9N2 400 aaKnown RBP9.27□□□□□ -0.93
SDCBP-211ENST00000523441 SLC37A3Q8NCC5 494 aa9.27□□□□□ -0.93
SDCBP-211ENST00000523441 KLHL30-AS1Q8NEE0 82 aa9.27□□□□□ -0.93
SDCBP-211ENST00000523441 Q8NFD4 153 aa9.27□□□□□ -0.93
SDCBP-211ENST00000523441 ZNF671Q8TAW3 534 aa9.27□□□□□ -0.93
SDCBP-211ENST00000523441 SDSLQ96GA7 329 aa9.27□□□□□ -0.93
SDCBP-211ENST00000523441 AMELYQ99218 206 aa9.27□□□□□ -0.93
SDCBP-211ENST00000523441 MCRIP2Q9BUT9 160 aaKnown RBP9.27□□□□□ -0.93
SDCBP-211ENST00000523441 PSMB11A5LHX3 300 aa9.26□□□□□ -0.93
SDCBP-211ENST00000523441 FAM172BPA6NC97 362 aa9.26□□□□□ -0.93
SDCBP-211ENST00000523441 BBIP1A8MTZ0 92 aa9.26□□□□□ -0.93
SDCBP-211ENST00000523441 NME4O00746 187 aa9.26□□□□□ -0.93
SDCBP-211ENST00000523441 GADD45GO95257 159 aa9.26□□□□□ -0.93
SDCBP-211ENST00000523441 NPPAP01160 153 aa9.26□□□□□ -0.93
SDCBP-211ENST00000523441 RHCEP18577 417 aa9.26□□□□□ -0.93
SDCBP-211ENST00000523441 CRMP1Q14194 572 aa9.26□□□□□ -0.93
SDCBP-211ENST00000523441 EDDM3AQ14507 147 aa9.26□□□□□ -0.93
SDCBP-211ENST00000523441 MAPRE2Q15555 327 aa9.26□□□□□ -0.93
SDCBP-211ENST00000523441 PLCXD3Q63HM9 321 aa9.26□□□□□ -0.93
SDCBP-211ENST00000523441 ZNF626Q68DY1 528 aa9.26□□□□□ -0.93
SDCBP-211ENST00000523441 ADAMTSL5Q6ZMM2 481 aa9.26□□□□□ -0.93
SDCBP-211ENST00000523441 KRT77Q7Z794 578 aa9.26□□□□□ -0.93
SDCBP-211ENST00000523441 HIST2H2ABQ8IUE6 130 aaPredicted RBP9.26□□□□□ -0.93
Retrieved 100 of 20,778 RNA–protein pairs in 25.3 ms