RNA–Protein interactions for RNA: ENST00000515531.1

SMARCA5-203, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily a, member 5, humanhuman

TSL 2

Gene SMARCA5, Length 529 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCA5-203ENST00000515531 SMARCD1Q96GM5 515 aa1.88□□□□□ -2.11
SMARCA5-203ENST00000515531 KLF6Q99612 283 aaPredicted RBP1.88□□□□□ -2.11
SMARCA5-203ENST00000515531 CLSTN2Q9H4D0 955 aa1.88□□□□□ -2.11
SMARCA5-203ENST00000515531 CD209Q9NNX6 404 aa1.88□□□□□ -2.11
SMARCA5-203ENST00000515531 MRPS30Q9NP92 439 aaKnown RBP1.88□□□□□ -2.11
SMARCA5-203ENST00000515531 NLE1Q9NVX2 485 aaPredicted RBP1.88□□□□□ -2.11
SMARCA5-203ENST00000515531 RRP15Q9Y3B9 282 aaKnown RBP1.88□□□□□ -2.11
SMARCA5-203ENST00000515531 SPATA31E1Q6ZUB1 1445 aa1.88□□□□□ -2.11
SMARCA5-203ENST00000515531 MROH5Q6ZUA9 1318 aa1.88□□□□□ -2.11
SMARCA5-203ENST00000515531 LOXHD1Q8IVV2 1947 aa1.87□□□□□ -2.11
SMARCA5-203ENST00000515531 SDHAF1A6NFY7 115 aa1.87□□□□□ -2.11
SMARCA5-203ENST00000515531 C3orf84H3BNL1 204 aa1.87□□□□□ -2.11
SMARCA5-203ENST00000515531 TTC4O95801 387 aa1.87□□□□□ -2.11
SMARCA5-203ENST00000515531 IGHMP01871 453 aa1.87□□□□□ -2.11
SMARCA5-203ENST00000515531 CATP04040 527 aaKnown RBP1.87□□□□□ -2.11
SMARCA5-203ENST00000515531 TACSTD2P09758 323 aa1.87□□□□□ -2.11
SMARCA5-203ENST00000515531 BRCA1P38398 1863 aaKnown RBP1.87□□□□□ -2.11
SMARCA5-203ENST00000515531 TUFMP49411 452 aaKnown RBP1.87□□□□□ -2.11
SMARCA5-203ENST00000515531 MTPNP58546 118 aa1.87□□□□□ -2.11
SMARCA5-203ENST00000515531 YWHAEP62258 255 aaKnown RBP1.87□□□□□ -2.11
SMARCA5-203ENST00000515531 C5orf64Q2M2E5 130 aa1.87□□□□□ -2.11
SMARCA5-203ENST00000515531 INO80EQ8NBZ0 244 aaPredicted RBP1.87□□□□□ -2.11
SMARCA5-203ENST00000515531 MUC7Q8TAX7 377 aa1.87□□□□□ -2.11
SMARCA5-203ENST00000515531 ORAOV1Q8WV07 137 aa1.87□□□□□ -2.11
SMARCA5-203ENST00000515531 ITLN2Q8WWU7 325 aaPredicted RBP1.87□□□□□ -2.11
SMARCA5-203ENST00000515531 FAM60AQ9NP50 221 aa1.87□□□□□ -2.11
SMARCA5-203ENST00000515531 DDX19BQ9UMR2 479 aa1.87□□□□□ -2.11
SMARCA5-203ENST00000515531 PPIL1Q9Y3C6 166 aa1.87□□□□□ -2.11
SMARCA5-203ENST00000515531 ELP1O95163 1332 aa1.87□□□□□ -2.11
SMARCA5-203ENST00000515531 TRAV8-6A0A0B4J262 113 aa1.86□□□□□ -2.11
SMARCA5-203ENST00000515531 A0A0B4J2E0 115 aa1.86□□□□□ -2.11
SMARCA5-203ENST00000515531 LRRIQ4A6NIV6 560 aa1.86□□□□□ -2.11
SMARCA5-203ENST00000515531 H3BQ85 93 aa1.86□□□□□ -2.11
SMARCA5-203ENST00000515531 WRBO00258 174 aa1.86□□□□□ -2.11
SMARCA5-203ENST00000515531 DNAJB6O75190 326 aa1.86□□□□□ -2.11
SMARCA5-203ENST00000515531 HSBP1O75506 76 aa1.86□□□□□ -2.11
SMARCA5-203ENST00000515531 CXorf1O96002 111 aa1.86□□□□□ -2.11
SMARCA5-203ENST00000515531 SLC35G6P0C7Q6 338 aa1.86□□□□□ -2.11
SMARCA5-203ENST00000515531 SEC11BP0C7V7 166 aa1.86□□□□□ -2.11
SMARCA5-203ENST00000515531 HLA-GP17693 338 aa1.86□□□□□ -2.11
SMARCA5-203ENST00000515531 ARL2P36404 184 aa1.86□□□□□ -2.11
SMARCA5-203ENST00000515531 IL5RAQ01344 420 aa1.86□□□□□ -2.11
SMARCA5-203ENST00000515531 CUL2Q13617 745 aa1.86□□□□□ -2.11
SMARCA5-203ENST00000515531 TPBGQ13641 420 aa1.86□□□□□ -2.11
SMARCA5-203ENST00000515531 IL18Q14116 193 aa1.86□□□□□ -2.11
SMARCA5-203ENST00000515531 THOC7Q6I9Y2 204 aaKnown RBP1.86□□□□□ -2.11
SMARCA5-203ENST00000515531 SLC7A5P1Q8MH63 180 aa1.86□□□□□ -2.11
SMARCA5-203ENST00000515531 KIF2BQ8N4N8 673 aa1.86□□□□□ -2.11
SMARCA5-203ENST00000515531 ZFP62Q8NB50 900 aaPredicted RBP1.86□□□□□ -2.11
SMARCA5-203ENST00000515531 OR10Z1Q8NGY1 313 aa1.86□□□□□ -2.11
SMARCA5-203ENST00000515531 FAM57AQ8TBR7 257 aa1.86□□□□□ -2.11
SMARCA5-203ENST00000515531 ISG20Q96AZ6 181 aaKnown RBP1.86□□□□□ -2.11
SMARCA5-203ENST00000515531 STMN4Q9H169 189 aaPredicted RBP1.86□□□□□ -2.11
SMARCA5-203ENST00000515531 DEFB129Q9H1M3 183 aa1.86□□□□□ -2.11
SMARCA5-203ENST00000515531 AUNIPQ9H7T9 357 aa1.86□□□□□ -2.11
SMARCA5-203ENST00000515531 SND1-IT1Q9HBX3 110 aa1.86□□□□□ -2.11
SMARCA5-203ENST00000515531 LYRM4Q9HD34 91 aa1.86□□□□□ -2.11
SMARCA5-203ENST00000515531 PXMP2Q9NR77 195 aa1.86□□□□□ -2.11
SMARCA5-203ENST00000515531 MRPL22Q9NWU5 206 aaKnown RBP1.86□□□□□ -2.11
SMARCA5-203ENST00000515531 TBC1D24Q9ULP9 559 aa1.86□□□□□ -2.11
SMARCA5-203ENST00000515531 OR51B2Q9Y5P1 312 aa1.86□□□□□ -2.11
SMARCA5-203ENST00000515531 TRAPPC1Q9Y5R8 145 aa1.86□□□□□ -2.11
SMARCA5-203ENST00000515531 BAZ1BQ9UIG0 1483 aaKnown RBP1.86□□□□□ -2.11
SMARCA5-203ENST00000515531 HACD1B0YJ81 288 aa1.85□□□□□ -2.11
SMARCA5-203ENST00000515531 CDK1P06493 297 aa1.85□□□□□ -2.11
SMARCA5-203ENST00000515531 CD99P14209 185 aa1.85□□□□□ -2.11
SMARCA5-203ENST00000515531 SLC35A1P78382 337 aa1.85□□□□□ -2.11
SMARCA5-203ENST00000515531 BEX3Q00994 111 aa1.85□□□□□ -2.11
SMARCA5-203ENST00000515531 RPL18AQ02543 176 aaKnown RBP1.85□□□□□ -2.11
SMARCA5-203ENST00000515531 ANGPTL8Q6UXH0 198 aa1.85□□□□□ -2.11
SMARCA5-203ENST00000515531 ING5Q8WYH8 240 aa1.85□□□□□ -2.11
SMARCA5-203ENST00000515531 RNF170Q96K19 258 aa1.85□□□□□ -2.11
SMARCA5-203ENST00000515531 UBE2E2Q96LR5 201 aa1.85□□□□□ -2.11
SMARCA5-203ENST00000515531 ARV1Q9H2C2 271 aa1.85□□□□□ -2.11
SMARCA5-203ENST00000515531 EXO5Q9H790 373 aa1.85□□□□□ -2.11
SMARCA5-203ENST00000515531 CYP3A43Q9HB55 503 aa1.85□□□□□ -2.11
SMARCA5-203ENST00000515531 ABCB9Q9NP78 766 aa1.85□□□□□ -2.11
SMARCA5-203ENST00000515531 ACOT9Q9Y305 439 aa1.85□□□□□ -2.11
SMARCA5-203ENST00000515531 IGLL5B9A064 214 aa1.84□□□□□ -2.11
SMARCA5-203ENST00000515531 ENTPD6O75354 484 aa1.84□□□□□ -2.11
SMARCA5-203ENST00000515531 SMC2O95347 1197 aa1.84□□□□□ -2.11
SMARCA5-203ENST00000515531 OR4Q2P0C623 313 aa1.84□□□□□ -2.11
SMARCA5-203ENST00000515531 FUSP35637 526 aaKnown RBP eCLIP1.84□□□□□ -2.11
SMARCA5-203ENST00000515531 PSMB2P49721 201 aa1.84□□□□□ -2.11
SMARCA5-203ENST00000515531 FOXA1P55317 472 aa1.84□□□□□ -2.11
SMARCA5-203ENST00000515531 TAS2R39P59534 338 aa1.84□□□□□ -2.11
SMARCA5-203ENST00000515531 RAB11AP62491 216 aa1.84□□□□□ -2.11
SMARCA5-203ENST00000515531 KRTAP25-1Q3LHN0 102 aa1.84□□□□□ -2.11
SMARCA5-203ENST00000515531 LGALSLQ3ZCW2 172 aaPredicted RBP1.84□□□□□ -2.11
SMARCA5-203ENST00000515531 SPNS3Q6ZMD2 512 aa1.84□□□□□ -2.11
SMARCA5-203ENST00000515531 TCF24Q7RTU0 167 aa1.84□□□□□ -2.11
SMARCA5-203ENST00000515531 FAM122BQ7Z309 247 aa1.84□□□□□ -2.11
SMARCA5-203ENST00000515531 TMEM144Q7Z5S9 345 aa1.84□□□□□ -2.11
SMARCA5-203ENST00000515531 CPNE9Q8IYJ1 553 aa1.84□□□□□ -2.11
SMARCA5-203ENST00000515531 EIF4E3Q8N5X7 224 aaKnown RBP1.84□□□□□ -2.11
SMARCA5-203ENST00000515531 ZDHHC22Q8N966 263 aa1.84□□□□□ -2.11
SMARCA5-203ENST00000515531 Q8NDZ9 215 aa1.84□□□□□ -2.11
SMARCA5-203ENST00000515531 NAA50Q9GZZ1 169 aaKnown RBP1.84□□□□□ -2.11
SMARCA5-203ENST00000515531 RDH14Q9HBH5 336 aa1.84□□□□□ -2.11
SMARCA5-203ENST00000515531 ZNF407Q9C0G0 2248 aa1.84□□□□□ -2.11
Retrieved 100 of 20,778 RNA–protein pairs in 33.5 ms