RNA–Protein interactions for RNA: ENST00000515459.5

LMNA-223, Transcript of lamin A/C, humanhuman

TSL 5

Gene LMNA, Length 757 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LMNA-223ENST00000515459 ARSJQ5FYB0 599 aaPredicted RBP12.72□□□□□ -0.37
LMNA-223ENST00000515459 SAMD4BQ5PRF9 694 aaKnown RBP12.72□□□□□ -0.37
LMNA-223ENST00000515459 TMEM200BQ69YZ2 307 aa12.72□□□□□ -0.37
LMNA-223ENST00000515459 C11orf87Q6NUJ2 197 aa12.72□□□□□ -0.37
LMNA-223ENST00000515459 CCBE1Q6UXH8 406 aaPredicted RBP12.72□□□□□ -0.37
LMNA-223ENST00000515459 THAP5Q7Z6K1 395 aa12.72□□□□□ -0.37
LMNA-223ENST00000515459 LHFPL4Q7Z7J7 247 aa12.72□□□□□ -0.37
LMNA-223ENST00000515459 OR2T33Q8NG76 320 aa12.72□□□□□ -0.37
LMNA-223ENST00000515459 OR4Q3Q8NH05 313 aa12.72□□□□□ -0.37
LMNA-223ENST00000515459 CMTM5Q96DZ9 223 aa12.72□□□□□ -0.37
LMNA-223ENST00000515459 NSMCE2Q96MF7 247 aa12.72□□□□□ -0.37
LMNA-223ENST00000515459 OR5M11Q96RB7 305 aa12.72□□□□□ -0.37
LMNA-223ENST00000515459 WNT10AQ9GZT5 417 aa12.72□□□□□ -0.37
LMNA-223ENST00000515459 OR51I2Q9H344 312 aa12.72□□□□□ -0.37
LMNA-223ENST00000515459 ABCB10Q9NRK6 738 aa12.72□□□□□ -0.37
LMNA-223ENST00000515459 USE1Q9NZ43 259 aa12.72□□□□□ -0.37
LMNA-223ENST00000515459 LYVE1Q9Y5Y7 322 aa12.72□□□□□ -0.37
LMNA-223ENST00000515459 KMT2CQ8NEZ4 4911 aaKnown RBP12.72□□□□□ -0.37
LMNA-223ENST00000515459 RIIAD1A6NNX1 92 aa12.71□□□□□ -0.37
LMNA-223ENST00000515459 ZNF732B4DXR9 585 aa12.71□□□□□ -0.37
LMNA-223ENST00000515459 SLC1A7O00341 560 aa12.71□□□□□ -0.37
LMNA-223ENST00000515459 VSIG8P0DPA2 414 aa12.71□□□□□ -0.37
LMNA-223ENST00000515459 ZNF770Q6IQ21 691 aaPredicted RBP12.71□□□□□ -0.37
LMNA-223ENST00000515459 TMEM219Q86XT9 240 aa12.71□□□□□ -0.37
LMNA-223ENST00000515459 DYNAPQ8N1N2 210 aa12.71□□□□□ -0.37
LMNA-223ENST00000515459 RPS4Y2Q8TD47 263 aa12.71□□□□□ -0.37
LMNA-223ENST00000515459 LYZL4Q96KX0 146 aa12.71□□□□□ -0.37
LMNA-223ENST00000515459 RASL12Q9NYN1 266 aa12.71□□□□□ -0.37
LMNA-223ENST00000515459 A6NDX4 124 aa12.7□□□□□ -0.38
LMNA-223ENST00000515459 TNFRSF11BO00300 401 aa12.7□□□□□ -0.38
LMNA-223ENST00000515459 MTRF1O75570 445 aaKnown RBP12.7□□□□□ -0.38
LMNA-223ENST00000515459 SOX14O95416 240 aa12.7□□□□□ -0.38
LMNA-223ENST00000515459 HSD17B1P14061 328 aa12.7□□□□□ -0.38
LMNA-223ENST00000515459 CCL3L1P16619 93 aa12.7□□□□□ -0.38
LMNA-223ENST00000515459 SMIM21Q3B7S5 101 aa12.7□□□□□ -0.38
LMNA-223ENST00000515459 CEACAM21Q3KPI0 293 aa12.7□□□□□ -0.38
LMNA-223ENST00000515459 DEFB121Q5J5C9 76 aa12.7□□□□□ -0.38
LMNA-223ENST00000515459 CEP78Q5JTW2 689 aa12.7□□□□□ -0.38
LMNA-223ENST00000515459 ZNF782Q6ZMW2 699 aaPredicted RBP12.7□□□□□ -0.38
LMNA-223ENST00000515459 ACP7Q6ZNF0 438 aa12.7□□□□□ -0.38
LMNA-223ENST00000515459 ZNF561Q8N587 486 aa12.7□□□□□ -0.38
LMNA-223ENST00000515459 CD177Q8N6Q3 437 aa12.7□□□□□ -0.38
LMNA-223ENST00000515459 OR4M1Q8NGD0 313 aa12.7□□□□□ -0.38
LMNA-223ENST00000515459 OR8B12Q8NGG6 310 aa12.7□□□□□ -0.38
LMNA-223ENST00000515459 OR2T27Q8NH04 317 aa12.7□□□□□ -0.38
LMNA-223ENST00000515459 AQP3Q92482 292 aa12.7□□□□□ -0.38
LMNA-223ENST00000515459 FOXRED1Q96CU9 486 aaPredicted RBP12.7□□□□□ -0.38
LMNA-223ENST00000515459 MALSU1Q96EH3 234 aa12.7□□□□□ -0.38
LMNA-223ENST00000515459 MED20Q9H944 212 aa12.7□□□□□ -0.38
LMNA-223ENST00000515459 ARMC1Q9NVT9 282 aa12.7□□□□□ -0.38
LMNA-223ENST00000515459 TBL2Q9Y4P3 447 aaKnown RBP12.7□□□□□ -0.38
LMNA-223ENST00000515459 A0A1W2PRX2 142 aa12.69□□□□□ -0.38
LMNA-223ENST00000515459 FAM183AA6NL82 134 aa12.69□□□□□ -0.38
LMNA-223ENST00000515459 RFPL4AA6NLU0 287 aa12.69□□□□□ -0.38
LMNA-223ENST00000515459 RFPL4AL1F8VTS6 287 aa12.69□□□□□ -0.38
LMNA-223ENST00000515459 ARPC2O15144 300 aa12.69□□□□□ -0.38
LMNA-223ENST00000515459 CCNB2O95067 398 aa12.69□□□□□ -0.38
LMNA-223ENST00000515459 ALDOBP05062 364 aa12.69□□□□□ -0.38
LMNA-223ENST00000515459 ARG1P05089 322 aa12.69□□□□□ -0.38
LMNA-223ENST00000515459 LYNP07948 512 aa12.69□□□□□ -0.38
LMNA-223ENST00000515459 PF4V1P10720 104 aa12.69□□□□□ -0.38
LMNA-223ENST00000515459 VDAC2P45880 294 aaPredicted RBP12.69□□□□□ -0.38
LMNA-223ENST00000515459 MAP2K3P46734 347 aa12.69□□□□□ -0.38
LMNA-223ENST00000515459 CD83Q01151 205 aa12.69□□□□□ -0.38
LMNA-223ENST00000515459 ZNF273Q14593 569 aa12.69□□□□□ -0.38
LMNA-223ENST00000515459 SSX2Q16385 188 aa12.69□□□□□ -0.38
LMNA-223ENST00000515459 HAGHLQ6PII5 290 aaPredicted RBP12.69□□□□□ -0.38
LMNA-223ENST00000515459 CALHM1Q8IU99 346 aa12.69□□□□□ -0.38
LMNA-223ENST00000515459 AQP11Q8NBQ7 271 aa12.69□□□□□ -0.38
LMNA-223ENST00000515459 OR5A2Q8NGI9 324 aa12.69□□□□□ -0.38
LMNA-223ENST00000515459 OTOSQ8NHW6 89 aa12.69□□□□□ -0.38
LMNA-223ENST00000515459 FAM81AQ8TBF8 368 aa12.69□□□□□ -0.38
LMNA-223ENST00000515459 THEM6Q8WUY1 208 aa12.69□□□□□ -0.38
LMNA-223ENST00000515459 OTULINQ96BN8 352 aa12.69□□□□□ -0.38
LMNA-223ENST00000515459 C1orf21Q9H246 121 aa12.69□□□□□ -0.38
LMNA-223ENST00000515459 CCDC134Q9H6E4 229 aa12.69□□□□□ -0.38
LMNA-223ENST00000515459 CMC2Q9NRP2 79 aa12.69□□□□□ -0.38
LMNA-223ENST00000515459 ARGLU1Q9NWB6 273 aaPredicted RBP12.69□□□□□ -0.38
LMNA-223ENST00000515459 COL7A1Q02388 2944 aa12.68□□□□□ -0.38
LMNA-223ENST00000515459 OR5B21A6NL26 309 aa12.68□□□□□ -0.38
LMNA-223ENST00000515459 PRDX2P32119 198 aa12.68□□□□□ -0.38
LMNA-223ENST00000515459 MSX2P35548 267 aaPredicted RBP12.68□□□□□ -0.38
LMNA-223ENST00000515459 PSMA6P60900 246 aaKnown RBP12.68□□□□□ -0.38
LMNA-223ENST00000515459 BLCAPP62952 87 aa12.68□□□□□ -0.38
LMNA-223ENST00000515459 SLC35A2P78381 396 aa12.68□□□□□ -0.38
LMNA-223ENST00000515459 DMRTC1Q5HYR2 192 aa12.68□□□□□ -0.38
LMNA-223ENST00000515459 Q6ZS46 218 aa12.68□□□□□ -0.38
LMNA-223ENST00000515459 KRT74Q7RTS7 529 aa12.68□□□□□ -0.38
LMNA-223ENST00000515459 ZNF454Q8N9F8 522 aa12.68□□□□□ -0.38
LMNA-223ENST00000515459 OR5AU1Q8NGC0 362 aa12.68□□□□□ -0.38
LMNA-223ENST00000515459 OR13D1Q8NGV5 346 aa12.68□□□□□ -0.38
LMNA-223ENST00000515459 NIPAL2Q9H841 368 aa12.68□□□□□ -0.38
LMNA-223ENST00000515459 C17orf98A8MV24 154 aa12.67□□□□□ -0.38
LMNA-223ENST00000515459 ODF3BA8MYP8 253 aa12.67□□□□□ -0.38
LMNA-223ENST00000515459 SASH3O75995 380 aa12.67□□□□□ -0.38
LMNA-223ENST00000515459 PF4P02776 101 aa12.67□□□□□ -0.38
LMNA-223ENST00000515459 PRDX6P30041 224 aa12.67□□□□□ -0.38
LMNA-223ENST00000515459 CEBPDP49716 269 aaPredicted RBP12.67□□□□□ -0.38
LMNA-223ENST00000515459 DYNLT3P51808 116 aa12.67□□□□□ -0.38
LMNA-223ENST00000515459 TMEM95Q3KNT9 176 aa12.67□□□□□ -0.38
Retrieved 100 of 20,778 RNA–protein pairs in 40.9 ms