RNA–Protein interactions for RNA: ENST00000511604.5

CPNE4-208, Transcript of copine 4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CPNE4, Length 2,503 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPNE4-208ENST00000511604 MARCH1Q8TCQ1 289 aa6.48□□□□□ -1.37
CPNE4-208ENST00000511604 IL22RA2Q969J5 263 aa6.48□□□□□ -1.37
CPNE4-208ENST00000511604 APH1AQ96BI3 265 aa6.48□□□□□ -1.37
CPNE4-208ENST00000511604 REEP6Q96HR9 211 aa6.48□□□□□ -1.37
CPNE4-208ENST00000511604 SLC35G5Q96KT7 338 aa6.48□□□□□ -1.37
CPNE4-208ENST00000511604 MCHR1Q99705 422 aa6.48□□□□□ -1.37
CPNE4-208ENST00000511604 ARHGDIGQ99819 225 aa6.48□□□□□ -1.37
CPNE4-208ENST00000511604 PRSS27Q9BQR3 290 aa6.48□□□□□ -1.37
CPNE4-208ENST00000511604 ULBP3Q9BZM4 244 aa6.48□□□□□ -1.37
CPNE4-208ENST00000511604 ZCCHC3Q9NUD5 404 aaKnown RBP6.48□□□□□ -1.37
CPNE4-208ENST00000511604 TMEM106BQ9NUM4 274 aa6.48□□□□□ -1.37
CPNE4-208ENST00000511604 C14orf166Q9Y224 244 aaKnown RBP6.48□□□□□ -1.37
CPNE4-208ENST00000511604 COL4A3Q01955 1670 aa6.48□□□□□ -1.37
CPNE4-208ENST00000511604 MYO15AQ9UKN7 3530 aa6.47□□□□□ -1.37
CPNE4-208ENST00000511604 C9orf172C9J069 976 aa6.47□□□□□ -1.37
CPNE4-208ENST00000511604 CFPP27918 469 aa6.47□□□□□ -1.37
CPNE4-208ENST00000511604 CORO1AP31146 461 aaKnown RBP6.47□□□□□ -1.37
CPNE4-208ENST00000511604 P2RY1P47900 373 aa6.47□□□□□ -1.37
CPNE4-208ENST00000511604 SEC13P55735 322 aa6.47□□□□□ -1.37
CPNE4-208ENST00000511604 RHOGP84095 191 aa6.47□□□□□ -1.37
CPNE4-208ENST00000511604 HYAL1Q12794 435 aa6.47□□□□□ -1.37
CPNE4-208ENST00000511604 FZD2Q14332 565 aa6.47□□□□□ -1.37
CPNE4-208ENST00000511604 VAMP3Q15836 100 aa6.47□□□□□ -1.37
CPNE4-208ENST00000511604 SPSB3Q6PJ21 355 aa6.47□□□□□ -1.37
CPNE4-208ENST00000511604 GLB1LQ6UWU2 654 aa6.47□□□□□ -1.37
CPNE4-208ENST00000511604 TMEM182Q6ZP80 229 aaPredicted RBP6.47□□□□□ -1.37
CPNE4-208ENST00000511604 SELENOHQ8IZQ5 122 aaKnown RBP6.47□□□□□ -1.37
CPNE4-208ENST00000511604 ZNF417Q8TAU3 575 aa6.47□□□□□ -1.37
CPNE4-208ENST00000511604 CCDC74AQ96AQ1 378 aa6.47□□□□□ -1.37
CPNE4-208ENST00000511604 IMMP2LQ96T52 175 aa6.47□□□□□ -1.37
CPNE4-208ENST00000511604 PTPN18Q99952 460 aa6.47□□□□□ -1.37
CPNE4-208ENST00000511604 KLHDC3Q9BQ90 382 aa6.47□□□□□ -1.37
CPNE4-208ENST00000511604 ALG12Q9BV10 488 aa6.47□□□□□ -1.37
CPNE4-208ENST00000511604 MRPL13Q9BYD1 178 aaKnown RBP6.47□□□□□ -1.37
CPNE4-208ENST00000511604 HIPK2Q9H2X6 1198 aa6.47□□□□□ -1.37
CPNE4-208ENST00000511604 TMEM9BQ9NQ34 198 aa6.47□□□□□ -1.37
CPNE4-208ENST00000511604 CLN8Q9UBY8 286 aa6.47□□□□□ -1.37
CPNE4-208ENST00000511604 SMPXQ9UHP9 88 aa6.47□□□□□ -1.37
CPNE4-208ENST00000511604 ADAM29Q9UKF5 820 aa6.47□□□□□ -1.37
CPNE4-208ENST00000511604 GOLGA4Q13439 2230 aaKnown RBP6.47□□□□□ -1.37
CPNE4-208ENST00000511604 IGLV3-16A0A075B6K0 115 aa6.47□□□□□ -1.37
CPNE4-208ENST00000511604 TRBV5-5A0A0J9YX44 114 aa6.47□□□□□ -1.37
CPNE4-208ENST00000511604 A0A1B0GVT2 93 aa6.47□□□□□ -1.37
CPNE4-208ENST00000511604 RNF212BA8MTL3 300 aa6.47□□□□□ -1.37
CPNE4-208ENST00000511604 GPR89AB7ZAQ6 455 aa6.47□□□□□ -1.37
CPNE4-208ENST00000511604 RCBTB2O95199 551 aa6.47□□□□□ -1.37
CPNE4-208ENST00000511604 SFT2D2O95562 160 aa6.47□□□□□ -1.37
CPNE4-208ENST00000511604 CD55P08174 381 aa6.47□□□□□ -1.37
CPNE4-208ENST00000511604 GPR89BP0CG08 455 aa6.47□□□□□ -1.37
CPNE4-208ENST00000511604 MPC1LP0DKB6 136 aa6.47□□□□□ -1.37
CPNE4-208ENST00000511604 PSG1P11464 419 aa6.47□□□□□ -1.37
CPNE4-208ENST00000511604 FAHP16930 419 aa6.47□□□□□ -1.37
CPNE4-208ENST00000511604 SERPINA4P29622 427 aa6.47□□□□□ -1.37
CPNE4-208ENST00000511604 RPS27P42677 84 aaKnown RBP6.47□□□□□ -1.37
CPNE4-208ENST00000511604 CNN1P51911 297 aaKnown RBP6.47□□□□□ -1.37
CPNE4-208ENST00000511604 FAM3BP58499 235 aaPredicted RBP6.47□□□□□ -1.37
CPNE4-208ENST00000511604 SNAI3Q3KNW1 292 aa6.47□□□□□ -1.37
CPNE4-208ENST00000511604 ANKRD55Q3KP44 614 aa6.47□□□□□ -1.37
CPNE4-208ENST00000511604 FAM78AQ5JUQ0 283 aa6.47□□□□□ -1.37
CPNE4-208ENST00000511604 ZNF506Q5JVG8 444 aa6.47□□□□□ -1.37
CPNE4-208ENST00000511604 ACTL10Q5JWF8 245 aa6.47□□□□□ -1.37
CPNE4-208ENST00000511604 C17orf78Q8N4C9 275 aa6.47□□□□□ -1.37
CPNE4-208ENST00000511604 NPEPL1Q8NDH3 523 aa6.47□□□□□ -1.37
CPNE4-208ENST00000511604 OR4K13Q8NH42 304 aa6.47□□□□□ -1.37
CPNE4-208ENST00000511604 OR1E3Q8WZA6 343 aa6.47□□□□□ -1.37
CPNE4-208ENST00000511604 KTI12Q96EK9 354 aaPredicted RBP6.47□□□□□ -1.37
CPNE4-208ENST00000511604 SLC41A2Q96JW4 573 aa6.47□□□□□ -1.37
CPNE4-208ENST00000511604 ZNF48Q96MX3 618 aaPredicted RBP6.47□□□□□ -1.37
CPNE4-208ENST00000511604 OR6C1Q96RD1 312 aa6.47□□□□□ -1.37
CPNE4-208ENST00000511604 PRRX2Q99811 253 aa6.47□□□□□ -1.37
CPNE4-208ENST00000511604 GABRG3Q99928 467 aa6.47□□□□□ -1.37
CPNE4-208ENST00000511604 CTDSP1Q9GZU7 261 aa6.47□□□□□ -1.37
CPNE4-208ENST00000511604 RYDENQ9NUL5 291 aaKnown RBP6.47□□□□□ -1.37
CPNE4-208ENST00000511604 FLRT3Q9NZU0 649 aa6.47□□□□□ -1.37
CPNE4-208ENST00000511604 ICAM5Q9UMF0 924 aa6.47□□□□□ -1.37
CPNE4-208ENST00000511604 RCL1Q9Y2P8 373 aaKnown RBP6.47□□□□□ -1.37
CPNE4-208ENST00000511604 SPEGQ15772 3267 aa6.46□□□□□ -1.37
CPNE4-208ENST00000511604 NPIPA5A0A0B4J1W7 369 aa6.46□□□□□ -1.37
CPNE4-208ENST00000511604 FITM1A5D6W6 292 aa6.46□□□□□ -1.37
CPNE4-208ENST00000511604 ZNF814B7Z6K7 855 aa6.46□□□□□ -1.37
CPNE4-208ENST00000511604 CORTO00230 105 aa6.46□□□□□ -1.37
CPNE4-208ENST00000511604 NUDT21O43809 227 aaKnown RBP6.46□□□□□ -1.37
CPNE4-208ENST00000511604 DEDDO75618 318 aa6.46□□□□□ -1.37
CPNE4-208ENST00000511604 PFN1P07737 140 aaKnown RBP6.46□□□□□ -1.37
CPNE4-208ENST00000511604 LAMP2P13473 410 aa6.46□□□□□ -1.37
CPNE4-208ENST00000511604 MMP9P14780 707 aa6.46□□□□□ -1.37
CPNE4-208ENST00000511604 RPS4Y1P22090 263 aaKnown RBP6.46□□□□□ -1.37
CPNE4-208ENST00000511604 TUBG1P23258 451 aa6.46□□□□□ -1.37
CPNE4-208ENST00000511604 MC5RP33032 325 aa6.46□□□□□ -1.37
CPNE4-208ENST00000511604 HRH1P35367 487 aa6.46□□□□□ -1.37
CPNE4-208ENST00000511604 BSGP35613 385 aa6.46□□□□□ -1.37
CPNE4-208ENST00000511604 LGALS7P47929 136 aa6.46□□□□□ -1.37
CPNE4-208ENST00000511604 CDK3Q00526 305 aa6.46□□□□□ -1.37
CPNE4-208ENST00000511604 RBPJQ06330 500 aa6.46□□□□□ -1.37
CPNE4-208ENST00000511604 ZFP36L1Q07352 338 aaKnown RBP6.46□□□□□ -1.37
CPNE4-208ENST00000511604 C17orf67Q0P5P2 114 aa6.46□□□□□ -1.37
CPNE4-208ENST00000511604 CNKSR3Q6P9H4 555 aa6.46□□□□□ -1.37
CPNE4-208ENST00000511604 IL22RA1Q8N6P7 574 aa6.46□□□□□ -1.37
CPNE4-208ENST00000511604 LINC01555Q8NAE3 123 aa6.46□□□□□ -1.37
CPNE4-208ENST00000511604 OR8G5Q8NG78 346 aa6.46□□□□□ -1.37
Retrieved 100 of 20,778 RNA–protein pairs in 25.8 ms