RNA–Protein interactions for RNA: ENST00000509357.5

PDLIM5-213, Transcript of PDZ and LIM domain 5, humanhuman

TSL 5

Gene PDLIM5, Length 554 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM5-213ENST00000509357 ACTA2P62736 377 aa7.31□□□□□ -1.24
PDLIM5-213ENST00000509357 GNB2P62879 340 aa7.31□□□□□ -1.24
PDLIM5-213ENST00000509357 ACTG2P63267 376 aa7.31□□□□□ -1.24
PDLIM5-213ENST00000509357 PRDX4Q13162 271 aa7.31□□□□□ -1.24
PDLIM5-213ENST00000509357 KCNJ8Q15842 424 aa7.31□□□□□ -1.24
PDLIM5-213ENST00000509357 ZNF181Q2M3W8 571 aa7.31□□□□□ -1.24
PDLIM5-213ENST00000509357 ARMCX4Q5H9R4 360 aa7.31□□□□□ -1.24
PDLIM5-213ENST00000509357 CEP78Q5JTW2 689 aa7.31□□□□□ -1.24
PDLIM5-213ENST00000509357 RNLSQ5VYX0 342 aa7.31□□□□□ -1.24
PDLIM5-213ENST00000509357 BTNL3Q6UXE8 466 aa7.31□□□□□ -1.24
PDLIM5-213ENST00000509357 RBMS3Q6XE24 437 aaKnown RBP7.31□□□□□ -1.24
PDLIM5-213ENST00000509357 C1QL2Q7Z5L3 287 aa7.31□□□□□ -1.24
PDLIM5-213ENST00000509357 CELF2-AS1Q8N7Q2 184 aa7.31□□□□□ -1.24
PDLIM5-213ENST00000509357 OR8B3Q8NGG8 313 aa7.31□□□□□ -1.24
PDLIM5-213ENST00000509357 OR52N1Q8NH53 320 aa7.31□□□□□ -1.24
PDLIM5-213ENST00000509357 NEIL1Q96FI4 390 aaPredicted RBP7.31□□□□□ -1.24
PDLIM5-213ENST00000509357 CYYR1Q96J86 154 aa7.31□□□□□ -1.24
PDLIM5-213ENST00000509357 OR8B2Q96RD0 313 aa7.31□□□□□ -1.24
PDLIM5-213ENST00000509357 SSBP3Q9BWW4 388 aaPredicted RBP7.31□□□□□ -1.24
PDLIM5-213ENST00000509357 CDCA4Q9BXL8 241 aa7.31□□□□□ -1.24
PDLIM5-213ENST00000509357 MOB1AQ9H8S9 216 aa7.31□□□□□ -1.24
PDLIM5-213ENST00000509357 GPR173Q9NS66 373 aa7.31□□□□□ -1.24
PDLIM5-213ENST00000509357 C1orf123Q9NWV4 160 aa7.31□□□□□ -1.24
PDLIM5-213ENST00000509357 RNF7Q9UBF6 113 aa7.31□□□□□ -1.24
PDLIM5-213ENST00000509357 PIGLQ9Y2B2 252 aa7.31□□□□□ -1.24
PDLIM5-213ENST00000509357 LRCH1Q9Y2L9 728 aa7.31□□□□□ -1.24
PDLIM5-213ENST00000509357 LRRC42Q9Y546 428 aa7.31□□□□□ -1.24
PDLIM5-213ENST00000509357 PCDHGB1Q9Y5G3 927 aa7.31□□□□□ -1.24
PDLIM5-213ENST00000509357 STAB1Q9NY15 2570 aa7.3□□□□□ -1.24
PDLIM5-213ENST00000509357 MAGEA13PA6NCF6 341 aa7.3□□□□□ -1.24
PDLIM5-213ENST00000509357 SNTNA6NMZ2 147 aa7.3□□□□□ -1.24
PDLIM5-213ENST00000509357 PIN1P1O15428 100 aa7.3□□□□□ -1.24
PDLIM5-213ENST00000509357 RHBDL1O75783 438 aa7.3□□□□□ -1.24
PDLIM5-213ENST00000509357 ISG15P05161 165 aa7.3□□□□□ -1.24
PDLIM5-213ENST00000509357 WNT2P09544 360 aa7.3□□□□□ -1.24
PDLIM5-213ENST00000509357 GATA4P43694 442 aa7.3□□□□□ -1.24
PDLIM5-213ENST00000509357 PITPNBP48739 271 aa7.3□□□□□ -1.24
PDLIM5-213ENST00000509357 CCR9P51686 369 aa7.3□□□□□ -1.24
PDLIM5-213ENST00000509357 ZNF154Q13106 437 aa7.3□□□□□ -1.24
PDLIM5-213ENST00000509357 ZNF404Q494X3 552 aa7.3□□□□□ -1.24
PDLIM5-213ENST00000509357 SFRP4Q6FHJ7 346 aaPredicted RBP7.3□□□□□ -1.24
PDLIM5-213ENST00000509357 C1orf229Q6ZS94 237 aaPredicted RBP7.3□□□□□ -1.24
PDLIM5-213ENST00000509357 KCTD20Q7Z5Y7 419 aa7.3□□□□□ -1.24
PDLIM5-213ENST00000509357 COMMD2Q86X83 199 aa7.3□□□□□ -1.24
PDLIM5-213ENST00000509357 STX19Q8N4C7 294 aa7.3□□□□□ -1.24
PDLIM5-213ENST00000509357 FTMTQ8N4E7 242 aa7.3□□□□□ -1.24
PDLIM5-213ENST00000509357 Q8TCH9 128 aa7.3□□□□□ -1.24
PDLIM5-213ENST00000509357 C22orf15Q8WYQ4 148 aa7.3□□□□□ -1.24
PDLIM5-213ENST00000509357 OR5P3Q8WZ94 311 aa7.3□□□□□ -1.24
PDLIM5-213ENST00000509357 PIGCQ92535 297 aa7.3□□□□□ -1.24
PDLIM5-213ENST00000509357 OPALINQ96PE5 141 aa7.3□□□□□ -1.24
PDLIM5-213ENST00000509357 TECTBQ96PL2 329 aa7.3□□□□□ -1.24
PDLIM5-213ENST00000509357 JMJD8Q96S16 334 aa7.3□□□□□ -1.24
PDLIM5-213ENST00000509357 TMEM246Q9BRR3 403 aa7.3□□□□□ -1.24
PDLIM5-213ENST00000509357 PAPOLGQ9BWT3 736 aaKnown RBP7.3□□□□□ -1.24
PDLIM5-213ENST00000509357 SUCNR1Q9BXA5 334 aa7.3□□□□□ -1.24
PDLIM5-213ENST00000509357 TLNRD1Q9H1K6 362 aa7.3□□□□□ -1.24
PDLIM5-213ENST00000509357 PPIL3Q9H2H8 161 aaKnown RBP7.3□□□□□ -1.24
PDLIM5-213ENST00000509357 RGCCQ9H4X1 137 aa7.3□□□□□ -1.24
PDLIM5-213ENST00000509357 MMP26Q9NRE1 261 aa7.3□□□□□ -1.24
PDLIM5-213ENST00000509357 BABAM2Q9NXR7 383 aa7.3□□□□□ -1.24
PDLIM5-213ENST00000509357 CLN8Q9UBY8 286 aa7.3□□□□□ -1.24
PDLIM5-213ENST00000509357 A0A0A6YYJ9 748 aa7.29□□□□□ -1.24
PDLIM5-213ENST00000509357 TRAV38-1A0A0B4J264 116 aa7.29□□□□□ -1.24
PDLIM5-213ENST00000509357 PPIAL4CA0A0B4J2A2 164 aa7.29□□□□□ -1.24
PDLIM5-213ENST00000509357 TRBV5-5A0A0J9YX44 114 aa7.29□□□□□ -1.24
PDLIM5-213ENST00000509357 ZNF816-ZNF321PA0A0X1KG74 233 aa7.29□□□□□ -1.24
PDLIM5-213ENST00000509357 A0A1B0GW55 424 aa7.29□□□□□ -1.24
PDLIM5-213ENST00000509357 ANXA2P2A6NMY6 339 aa7.29□□□□□ -1.24
PDLIM5-213ENST00000509357 F5H0A9 414 aaPredicted RBP7.29□□□□□ -1.24
PDLIM5-213ENST00000509357 F8VVB4 439 aa7.29□□□□□ -1.24
PDLIM5-213ENST00000509357 F8VWA3 439 aa7.29□□□□□ -1.24
PDLIM5-213ENST00000509357 TRAPPC2LH3BP13 241 aa7.29□□□□□ -1.24
PDLIM5-213ENST00000509357 HAX1O00165 279 aa7.29□□□□□ -1.24
PDLIM5-213ENST00000509357 LGALS8O00214 317 aa7.29□□□□□ -1.24
PDLIM5-213ENST00000509357 SYT7O43581 403 aa7.29□□□□□ -1.24
PDLIM5-213ENST00000509357 DUX4L2P0CJ85 424 aa7.29□□□□□ -1.24
PDLIM5-213ENST00000509357 DUX4L3P0CJ86 424 aa7.29□□□□□ -1.24
PDLIM5-213ENST00000509357 DUX4L4P0CJ87 422 aa7.29□□□□□ -1.24
PDLIM5-213ENST00000509357 DUX4L5P0CJ88 424 aa7.29□□□□□ -1.24
PDLIM5-213ENST00000509357 DUX4L6P0CJ89 424 aa7.29□□□□□ -1.24
PDLIM5-213ENST00000509357 DUX4L7P0CJ90 424 aa7.29□□□□□ -1.24
PDLIM5-213ENST00000509357 ZNF12P17014 697 aa7.29□□□□□ -1.24
PDLIM5-213ENST00000509357 AMY2BP19961 511 aa7.29□□□□□ -1.24
PDLIM5-213ENST00000509357 CPT2P23786 658 aa7.29□□□□□ -1.24
PDLIM5-213ENST00000509357 CD80P33681 288 aa7.29□□□□□ -1.24
PDLIM5-213ENST00000509357 WNT4P56705 351 aa7.29□□□□□ -1.24
PDLIM5-213ENST00000509357 ACTG1P63261 375 aa7.29□□□□□ -1.24
PDLIM5-213ENST00000509357 SSX1Q16384 188 aa7.29□□□□□ -1.24
PDLIM5-213ENST00000509357 FAM76BQ5HYJ3 339 aa7.29□□□□□ -1.24
PDLIM5-213ENST00000509357 RBM48Q5RL73 367 aaKnown RBP7.29□□□□□ -1.24
PDLIM5-213ENST00000509357 FAM27D1Q5T7N8 215 aa7.29□□□□□ -1.24
PDLIM5-213ENST00000509357 ZNF529Q6P280 563 aa7.29□□□□□ -1.24
PDLIM5-213ENST00000509357 DUX4L9Q6RFH8 374 aaPredicted RBP7.29□□□□□ -1.24
PDLIM5-213ENST00000509357 DCDC5Q6ZRR9 648 aa7.29□□□□□ -1.24
PDLIM5-213ENST00000509357 KCTD8Q6ZWB6 473 aa7.29□□□□□ -1.24
PDLIM5-213ENST00000509357 DOK3Q7L591 496 aa7.29□□□□□ -1.24
PDLIM5-213ENST00000509357 PRSS48Q7RTY5 328 aa7.29□□□□□ -1.24
PDLIM5-213ENST00000509357 FAM220AQ7Z4H9 259 aa7.29□□□□□ -1.24
PDLIM5-213ENST00000509357 CALHM1Q8IU99 346 aa7.29□□□□□ -1.24
Retrieved 100 of 20,778 RNA–protein pairs in 34.6 ms