RNA–Protein interactions for RNA: ENST00000506368.5

SCLT1-208, Transcript of sodium channel and clathrin linker 1, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene SCLT1, Length 2,096 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCLT1-208ENST00000506368 OR2T2Q6IF00 324 aa14.02□□□□□ -0.17
SCLT1-208ENST00000506368 SPNS3Q6ZMD2 512 aa14.02□□□□□ -0.17
SCLT1-208ENST00000506368 C1orf87Q8N0U7 546 aa14.02□□□□□ -0.17
SCLT1-208ENST00000506368 FAM160A2Q8N612 972 aaPredicted RBP14.02□□□□□ -0.17
SCLT1-208ENST00000506368 GATSQ8NAP1 163 aa14.02□□□□□ -0.17
SCLT1-208ENST00000506368 OR10G6Q8NH81 332 aa14.02□□□□□ -0.17
SCLT1-208ENST00000506368 RBMXL1Q96E39 390 aaKnown RBP14.02□□□□□ -0.17
SCLT1-208ENST00000506368 PACRGQ96M98 296 aaPredicted RBP14.02□□□□□ -0.17
SCLT1-208ENST00000506368 C1orf147Q96MC9 270 aaPredicted RBP14.02□□□□□ -0.17
SCLT1-208ENST00000506368 NDUFAF3Q9BU61 184 aa14.02□□□□□ -0.17
SCLT1-208ENST00000506368 PBOV1Q9GZY1 135 aa14.02□□□□□ -0.17
SCLT1-208ENST00000506368 PRR13Q9NZ81 148 aa14.02□□□□□ -0.17
SCLT1-208ENST00000506368 PISDQ9UG56 409 aa14.02□□□□□ -0.17
SCLT1-208ENST00000506368 MMP24Q9Y5R2 645 aa14.02□□□□□ -0.17
SCLT1-208ENST00000506368 CPAMD8Q8IZJ3 1885 aa14.01□□□□□ -0.17
SCLT1-208ENST00000506368 MPDZO75970 2070 aa14.01□□□□□ -0.17
SCLT1-208ENST00000506368 A0A1W2PQD3 144 aa14.01□□□□□ -0.17
SCLT1-208ENST00000506368 FTCDNL1E5RQL4 147 aa14.01□□□□□ -0.17
SCLT1-208ENST00000506368 HRKO00198 91 aa14.01□□□□□ -0.17
SCLT1-208ENST00000506368 TCAPO15273 167 aa14.01□□□□□ -0.17
SCLT1-208ENST00000506368 SOCS1O15524 211 aa14.01□□□□□ -0.17
SCLT1-208ENST00000506368 LMX1BO60663 402 aa14.01□□□□□ -0.17
SCLT1-208ENST00000506368 NPIPB7O75200 414 aa14.01□□□□□ -0.17
SCLT1-208ENST00000506368 SFTPCP11686 197 aa14.01□□□□□ -0.17
SCLT1-208ENST00000506368 ALDH3B1P43353 468 aa14.01□□□□□ -0.17
SCLT1-208ENST00000506368 DAP3P51398 398 aaKnown RBP14.01□□□□□ -0.17
SCLT1-208ENST00000506368 NHLH2Q02577 135 aa14.01□□□□□ -0.17
SCLT1-208ENST00000506368 CDPF1Q6NVV7 123 aa14.01□□□□□ -0.17
SCLT1-208ENST00000506368 TMEM156Q8N614 296 aa14.01□□□□□ -0.17
SCLT1-208ENST00000506368 OR10AD1Q8NGE0 317 aa14.01□□□□□ -0.17
SCLT1-208ENST00000506368 SUCNR1Q9BXA5 334 aa14.01□□□□□ -0.17
SCLT1-208ENST00000506368 ACTR3CQ9C0K3 210 aaPredicted RBP14.01□□□□□ -0.17
SCLT1-208ENST00000506368 SLC2A4RGQ9NR83 387 aa14.01□□□□□ -0.17
SCLT1-208ENST00000506368 DKKL1Q9UK85 242 aa14.01□□□□□ -0.17
SCLT1-208ENST00000506368 A0A1W2PQU0 124 aa14□□□□□ -0.17
SCLT1-208ENST00000506368 A6NCN8 305 aa14□□□□□ -0.17
SCLT1-208ENST00000506368 PLPP3O14495 311 aa14□□□□□ -0.17
SCLT1-208ENST00000506368 HSD17B6O14756 317 aa14□□□□□ -0.17
SCLT1-208ENST00000506368 SRP19P09132 144 aaKnown RBP14□□□□□ -0.17
SCLT1-208ENST00000506368 GP1BBP13224 206 aa14□□□□□ -0.17
SCLT1-208ENST00000506368 FOLR1P15328 257 aa14□□□□□ -0.17
SCLT1-208ENST00000506368 APOBEC1P41238 236 aaKnown RBP14□□□□□ -0.17
SCLT1-208ENST00000506368 POLR2HP52434 150 aaKnown RBP14□□□□□ -0.17
SCLT1-208ENST00000506368 HSD17B7P56937 341 aa14□□□□□ -0.17
SCLT1-208ENST00000506368 NUTF2P61970 127 aaKnown RBP14□□□□□ -0.17
SCLT1-208ENST00000506368 H3F3AP84243 136 aa14□□□□□ -0.17
SCLT1-208ENST00000506368 NNATQ16517 81 aa14□□□□□ -0.17
SCLT1-208ENST00000506368 DPPA3Q6W0C5 159 aa14□□□□□ -0.17
SCLT1-208ENST00000506368 TTLL10Q6ZVT0 673 aa14□□□□□ -0.17
SCLT1-208ENST00000506368 OOSP2Q86WS3 158 aa14□□□□□ -0.17
SCLT1-208ENST00000506368 DMRTC2Q8IXT2 367 aaPredicted RBP14□□□□□ -0.17
SCLT1-208ENST00000506368 SMOC1Q9H4F8 434 aa14□□□□□ -0.17
SCLT1-208ENST00000506368 BDP1A6H8Y1 2624 aa14□□□□□ -0.17
SCLT1-208ENST00000506368 NSG1A0A0A6YYJ2 146 aa14□□□□□ -0.17
SCLT1-208ENST00000506368 A0A1W2PP55 124 aa14□□□□□ -0.17
SCLT1-208ENST00000506368 A8MWP6 167 aa14□□□□□ -0.17
SCLT1-208ENST00000506368 C9J4A7 227 aa14□□□□□ -0.17
SCLT1-208ENST00000506368 HSPA12AO43301 675 aa14□□□□□ -0.17
SCLT1-208ENST00000506368 EML2O95834 649 aa14□□□□□ -0.17
SCLT1-208ENST00000506368 KNG1P01042 644 aa14□□□□□ -0.17
SCLT1-208ENST00000506368 HBE1P02100 147 aa14□□□□□ -0.17
SCLT1-208ENST00000506368 CXCL1P09341 107 aa14□□□□□ -0.17
SCLT1-208ENST00000506368 RND2P52198 227 aa14□□□□□ -0.17
SCLT1-208ENST00000506368 DLK1P80370 383 aa14□□□□□ -0.17
SCLT1-208ENST00000506368 ZP4Q12836 540 aa14□□□□□ -0.17
SCLT1-208ENST00000506368 ZNF506Q5JVG8 444 aa14□□□□□ -0.17
SCLT1-208ENST00000506368 PLPP5Q8NEB5 264 aa14□□□□□ -0.17
SCLT1-208ENST00000506368 FAM213BQ8TBF2 198 aa14□□□□□ -0.17
SCLT1-208ENST00000506368 FAM131CQ96AQ9 280 aa14□□□□□ -0.17
SCLT1-208ENST00000506368 ARHGAP5-AS1Q96IT6 56 aa14□□□□□ -0.17
SCLT1-208ENST00000506368 PARP12Q9H0J9 701 aaKnown RBP14□□□□□ -0.17
SCLT1-208ENST00000506368 NCOR1O75376 2440 aa13.99□□□□□ -0.17
SCLT1-208ENST00000506368 FAM230AA0A1W2PPH8 454 aa13.99□□□□□ -0.17
SCLT1-208ENST00000506368 C19orf67A6NJJ6 358 aa13.99□□□□□ -0.17
SCLT1-208ENST00000506368 TGFBR3LH3BV60 316 aa13.99□□□□□ -0.17
SCLT1-208ENST00000506368 CYB5BO43169 146 aa13.99□□□□□ -0.17
SCLT1-208ENST00000506368 ST8SIA3O43173 380 aa13.99□□□□□ -0.17
SCLT1-208ENST00000506368 PLRG1O43660 514 aaKnown RBP13.99□□□□□ -0.17
SCLT1-208ENST00000506368 AHSA1O95433 338 aa13.99□□□□□ -0.17
SCLT1-208ENST00000506368 MBPP02686 304 aaPredicted RBP13.99□□□□□ -0.17
SCLT1-208ENST00000506368 SERPINA2P20848 420 aa13.99□□□□□ -0.17
SCLT1-208ENST00000506368 DUSP1P28562 367 aa13.99□□□□□ -0.17
SCLT1-208ENST00000506368 ZNF429Q86V71 674 aa13.99□□□□□ -0.17
SCLT1-208ENST00000506368 ZNF761Q86XN6 746 aaPredicted RBP13.99□□□□□ -0.17
SCLT1-208ENST00000506368 WDR92Q96MX6 357 aa13.99□□□□□ -0.17
SCLT1-208ENST00000506368 FOXN4Q96NZ1 517 aa13.99□□□□□ -0.17
SCLT1-208ENST00000506368 MRPL37Q9BZE1 423 aaKnown RBP13.99□□□□□ -0.17
SCLT1-208ENST00000506368 TCEAL2Q9H3H9 227 aaPredicted RBP13.99□□□□□ -0.17
SCLT1-208ENST00000506368 GOLGA4Q13439 2230 aaKnown RBP13.99□□□□□ -0.17
SCLT1-208ENST00000506368 FRG2CA6NGY1 282 aa13.99□□□□□ -0.17
SCLT1-208ENST00000506368 FOXI3A8MTJ6 420 aaPredicted RBP13.99□□□□□ -0.17
SCLT1-208ENST00000506368 RAMP1O60894 148 aa13.99□□□□□ -0.17
SCLT1-208ENST00000506368 RAD51DO75771 328 aa13.99□□□□□ -0.17
SCLT1-208ENST00000506368 GCGP01275 180 aa13.99□□□□□ -0.17
SCLT1-208ENST00000506368 TRGC2P03986 189 aa13.99□□□□□ -0.17
SCLT1-208ENST00000506368 OR5AC1P0C628 307 aa13.99□□□□□ -0.17
SCLT1-208ENST00000506368 TRGC1P0CF51 173 aa13.99□□□□□ -0.17
SCLT1-208ENST00000506368 FABP4P15090 132 aa13.99□□□□□ -0.17
SCLT1-208ENST00000506368 PPP1CCP36873 323 aaKnown RBP13.99□□□□□ -0.17
SCLT1-208ENST00000506368 SQSTM1Q13501 440 aa13.99□□□□□ -0.17
Retrieved 100 of 20,778 RNA–protein pairs in 27.7 ms