RNA–Protein interactions for RNA: ENST00000504557.1

HOXC9-202, Transcript of homeobox C9, humanhuman

TSL 3

Gene HOXC9, Length 581 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HOXC9-202ENST00000504557 AKAP8LQ9ULX6 646 aaKnown RBP eCLIP11.81□□□□□ -0.528e-6■■■■□ 25
HOXC9-202ENST00000504557 A0A1B0GTI1 187 aa11.8□□□□□ -0.52
HOXC9-202ENST00000504557 FAM230AA0A1W2PPH8 454 aa11.8□□□□□ -0.52
HOXC9-202ENST00000504557 DAPL1A0PJW8 107 aa11.8□□□□□ -0.52
HOXC9-202ENST00000504557 DNAJC9-AS1A6NH13 148 aa11.8□□□□□ -0.52
HOXC9-202ENST00000504557 ZNF879B4DU55 563 aa11.8□□□□□ -0.52
HOXC9-202ENST00000504557 SYT7O43581 403 aa11.8□□□□□ -0.52
HOXC9-202ENST00000504557 PLATP00750 562 aa11.8□□□□□ -0.52
HOXC9-202ENST00000504557 IGLV3-1P01715 115 aa11.8□□□□□ -0.52
HOXC9-202ENST00000504557 ATP6V1B1P15313 513 aa11.8□□□□□ -0.52
HOXC9-202ENST00000504557 NDUFB7P17568 137 aa11.8□□□□□ -0.52
HOXC9-202ENST00000504557 CFHR2P36980 270 aa11.8□□□□□ -0.52
HOXC9-202ENST00000504557 HAAOP46952 286 aa11.8□□□□□ -0.52
HOXC9-202ENST00000504557 LRRC10Q5BKY1 277 aa11.8□□□□□ -0.52
HOXC9-202ENST00000504557 GPR157Q5UAW9 335 aa11.8□□□□□ -0.52
HOXC9-202ENST00000504557 STUMQ69YW2 141 aa11.8□□□□□ -0.52
HOXC9-202ENST00000504557 DOK3Q7L591 496 aa11.8□□□□□ -0.52
HOXC9-202ENST00000504557 CATSPERDQ86XM0 798 aa11.8□□□□□ -0.52
HOXC9-202ENST00000504557 RDH10Q8IZV5 341 aa11.8□□□□□ -0.52
HOXC9-202ENST00000504557 OR5A2Q8NGI9 324 aa11.8□□□□□ -0.52
HOXC9-202ENST00000504557 OR10Z1Q8NGY1 313 aa11.8□□□□□ -0.52
HOXC9-202ENST00000504557 OR14K1Q8NGZ2 314 aa11.8□□□□□ -0.52
HOXC9-202ENST00000504557 ELL3Q9HB65 397 aaPredicted RBP11.8□□□□□ -0.52
HOXC9-202ENST00000504557 NLKQ9UBE8 527 aa11.8□□□□□ -0.52
HOXC9-202ENST00000504557 V9GYS6 101 aa11.8□□□□□ -0.52
HOXC9-202ENST00000504557 OR5B21A6NL26 309 aa11.79□□□□□ -0.52
HOXC9-202ENST00000504557 OR2AT4A6NND4 320 aa11.79□□□□□ -0.52
HOXC9-202ENST00000504557 SYNGR1O43759 233 aa11.79□□□□□ -0.52
HOXC9-202ENST00000504557 AMY2BP19961 511 aa11.79□□□□□ -0.52
HOXC9-202ENST00000504557 CAPZA1P52907 286 aa11.79□□□□□ -0.52
HOXC9-202ENST00000504557 UBA52P62987 128 aaKnown RBP11.79□□□□□ -0.52
HOXC9-202ENST00000504557 LRRC36Q1X8D7 754 aa11.79□□□□□ -0.52
HOXC9-202ENST00000504557 TMEM185AQ8NFB2 350 aa11.79□□□□□ -0.52
HOXC9-202ENST00000504557 ZNF671Q8TAW3 534 aa11.79□□□□□ -0.52
HOXC9-202ENST00000504557 TRUB1Q8WWH5 349 aaKnown RBP11.79□□□□□ -0.52
HOXC9-202ENST00000504557 AQP3Q92482 292 aa11.79□□□□□ -0.52
HOXC9-202ENST00000504557 LHX4Q969G2 390 aa11.79□□□□□ -0.52
HOXC9-202ENST00000504557 ZDHHC16Q969W1 377 aa11.79□□□□□ -0.52
HOXC9-202ENST00000504557 WDFY2Q96P53 400 aa11.79□□□□□ -0.52
HOXC9-202ENST00000504557 GAFA1Q96PS6 74 aa11.79□□□□□ -0.52
HOXC9-202ENST00000504557 TBX15Q96SF7 602 aa11.79□□□□□ -0.52
HOXC9-202ENST00000504557 AMBNQ9NP70 447 aa11.79□□□□□ -0.52
HOXC9-202ENST00000504557 KAAG1Q9UBP8 84 aa11.79□□□□□ -0.52
HOXC9-202ENST00000504557 RPUSD1Q9UJJ7 312 aaKnown RBP11.79□□□□□ -0.52
HOXC9-202ENST00000504557 LOC107986453A0A1B0GWG9 222 aa11.78□□□□□ -0.52
HOXC9-202ENST00000504557 A0A1W2PQ09 198 aa11.78□□□□□ -0.52
HOXC9-202ENST00000504557 A0A1W2PRD5 423 aa11.78□□□□□ -0.52
HOXC9-202ENST00000504557 A0A1W2PRF3 423 aa11.78□□□□□ -0.52
HOXC9-202ENST00000504557 A0A1W2PRM7 423 aa11.78□□□□□ -0.52
HOXC9-202ENST00000504557 ANKRD61A6NGH8 418 aa11.78□□□□□ -0.52
HOXC9-202ENST00000504557 J3QLW9 94 aa11.78□□□□□ -0.52
HOXC9-202ENST00000504557 SULT1C4O75897 302 aa11.78□□□□□ -0.52
HOXC9-202ENST00000504557 PPIAL4GP0DN37 164 aa11.78□□□□□ -0.52
HOXC9-202ENST00000504557 ZNF19P17023 458 aa11.78□□□□□ -0.52
HOXC9-202ENST00000504557 KIR3DL2P43630 455 aa11.78□□□□□ -0.52
HOXC9-202ENST00000504557 CEBPDP49716 269 aaPredicted RBP11.78□□□□□ -0.52
HOXC9-202ENST00000504557 DLX1P56177 255 aa11.78□□□□□ -0.52
HOXC9-202ENST00000504557 OR12D2P58182 307 aa11.78□□□□□ -0.52
HOXC9-202ENST00000504557 SNRPGP62308 76 aaKnown RBP11.78□□□□□ -0.52
HOXC9-202ENST00000504557 IL13RA1P78552 427 aa11.78□□□□□ -0.52
HOXC9-202ENST00000504557 TMED1Q13445 227 aa11.78□□□□□ -0.52
HOXC9-202ENST00000504557 DGUOKQ16854 277 aa11.78□□□□□ -0.52
HOXC9-202ENST00000504557 DEFB112Q30KQ8 113 aa11.78□□□□□ -0.52
HOXC9-202ENST00000504557 FAM76BQ5HYJ3 339 aa11.78□□□□□ -0.52
HOXC9-202ENST00000504557 ZBTB37Q5TC79 503 aa11.78□□□□□ -0.52
HOXC9-202ENST00000504557 MEDAGQ5VYS4 303 aa11.78□□□□□ -0.52
HOXC9-202ENST00000504557 ANGPTL5Q86XS5 388 aa11.78□□□□□ -0.52
HOXC9-202ENST00000504557 ENTHD1Q8IYW4 607 aa11.78□□□□□ -0.52
HOXC9-202ENST00000504557 PRSS35Q8N3Z0 413 aa11.78□□□□□ -0.52
HOXC9-202ENST00000504557 PIP4P2Q8N4L2 257 aa11.78□□□□□ -0.52
HOXC9-202ENST00000504557 ZNRF1Q8ND25 227 aa11.78□□□□□ -0.52
HOXC9-202ENST00000504557 FAM216AQ8WUB2 273 aa11.78□□□□□ -0.52
HOXC9-202ENST00000504557 TAF15Q92804 592 aaKnown RBP eCLIP11.78□□□□□ -0.52
HOXC9-202ENST00000504557 C12orf43Q96C57 262 aaKnown RBP11.78□□□□□ -0.52
HOXC9-202ENST00000504557 SIRT7Q9NRC8 400 aa11.78□□□□□ -0.52
HOXC9-202ENST00000504557 SLC25A10Q9UBX3 287 aaPredicted RBP11.78□□□□□ -0.52
HOXC9-202ENST00000504557 OR14J1Q9UGF5 321 aa11.78□□□□□ -0.52
HOXC9-202ENST00000504557 IGKV1D-17A0A075B6S4 117 aa11.77□□□□□ -0.53
HOXC9-202ENST00000504557 SNTNA6NMZ2 147 aa11.77□□□□□ -0.53
HOXC9-202ENST00000504557 J3QT63 122 aa11.77□□□□□ -0.53
HOXC9-202ENST00000504557 DLGAP1O14490 977 aa11.77□□□□□ -0.53
HOXC9-202ENST00000504557 NXPH2O95156 264 aa11.77□□□□□ -0.53
HOXC9-202ENST00000504557 ECDO95905 644 aaPredicted RBP11.77□□□□□ -0.53
HOXC9-202ENST00000504557 LIPFP07098 398 aa11.77□□□□□ -0.53
HOXC9-202ENST00000504557 PSG2P11465 335 aa11.77□□□□□ -0.53
HOXC9-202ENST00000504557 ACTC1P68032 377 aa11.77□□□□□ -0.53
HOXC9-202ENST00000504557 ACTA1P68133 377 aa11.77□□□□□ -0.53
HOXC9-202ENST00000504557 ZNF91Q05481 1191 aa11.77□□□□□ -0.53
HOXC9-202ENST00000504557 OCLNQ16625 522 aa11.77□□□□□ -0.53
HOXC9-202ENST00000504557 VMO1Q7Z5L0 202 aa11.77□□□□□ -0.53
HOXC9-202ENST00000504557 LHFPL3Q86UP9 236 aa11.77□□□□□ -0.53
HOXC9-202ENST00000504557 ZNF573Q86YE8 665 aa11.77□□□□□ -0.53
HOXC9-202ENST00000504557 ANGPTL6Q8NI99 470 aa11.77□□□□□ -0.53
HOXC9-202ENST00000504557 ZFAND2BQ8WV99 257 aa11.77□□□□□ -0.53
HOXC9-202ENST00000504557 LGALS12Q96DT0 336 aa11.77□□□□□ -0.53
HOXC9-202ENST00000504557 MED30Q96HR3 178 aa11.77□□□□□ -0.53
HOXC9-202ENST00000504557 C4orf36Q96KX1 117 aa11.77□□□□□ -0.53
HOXC9-202ENST00000504557 C1orf147Q96MC9 270 aaPredicted RBP11.77□□□□□ -0.53
HOXC9-202ENST00000504557 SIRPDQ9H106 197 aa11.77□□□□□ -0.53
HOXC9-202ENST00000504557 CNTD2Q9H8S5 307 aa11.77□□□□□ -0.53
Retrieved 100 of 20,778 RNA–protein pairs in 30.8 ms