RNA–Protein interactions for RNA: ENST00000503338.5

TOPBP1-202, Transcript of DNA topoisomerase II binding protein 1, humanhuman

TSL 3

Gene TOPBP1, Length 618 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TOPBP1-202ENST00000503338 ZNF442Q9H7R0 627 aa6.97□□□□□ -1.29
TOPBP1-202ENST00000503338 ABCB10Q9NRK6 738 aa6.97□□□□□ -1.29
TOPBP1-202ENST00000503338 C14orf119Q9NWQ9 140 aa6.97□□□□□ -1.29
TOPBP1-202ENST00000503338 NPAP1Q9NZP6 1156 aa6.97□□□□□ -1.29
TOPBP1-202ENST00000503338 ING4Q9UNL4 249 aa6.97□□□□□ -1.29
TOPBP1-202ENST00000503338 POLDIP2Q9Y2S7 368 aa6.97□□□□□ -1.29
TOPBP1-202ENST00000503338 PKD1L2Q7Z442 2459 aa6.96□□□□□ -1.29
TOPBP1-202ENST00000503338 COL6A6A6NMZ7 2263 aa6.96□□□□□ -1.3
TOPBP1-202ENST00000503338 IGLV3-9A0A075B6K5 115 aa6.96□□□□□ -1.3
TOPBP1-202ENST00000503338 A0A0G2JMP0 313 aa6.96□□□□□ -1.3
TOPBP1-202ENST00000503338 A0A0X1KG70 313 aa6.96□□□□□ -1.3
TOPBP1-202ENST00000503338 A0A1B0GWJ7 208 aa6.96□□□□□ -1.3
TOPBP1-202ENST00000503338 FAM90A10PA6NDY2 464 aa6.96□□□□□ -1.3
TOPBP1-202ENST00000503338 FAM90A18PA6NE21 464 aa6.96□□□□□ -1.3
TOPBP1-202ENST00000503338 FAM90A16PA6NEW6 464 aa6.96□□□□□ -1.3
TOPBP1-202ENST00000503338 FAM90A20PA6NIJ5 464 aa6.96□□□□□ -1.3
TOPBP1-202ENST00000503338 FAM90A8PA6NJQ4 464 aa6.96□□□□□ -1.3
TOPBP1-202ENST00000503338 FAM90A7PA6NKC0 464 aa6.96□□□□□ -1.3
TOPBP1-202ENST00000503338 FAM90A22PA8MWA6 464 aa6.96□□□□□ -1.3
TOPBP1-202ENST00000503338 FAM90A12PA8MX19 464 aa6.96□□□□□ -1.3
TOPBP1-202ENST00000503338 FAM90A5PA8MXJ8 464 aa6.96□□□□□ -1.3
TOPBP1-202ENST00000503338 FAM90A23PA8MXZ1 464 aa6.96□□□□□ -1.3
TOPBP1-202ENST00000503338 ZNF732B4DXR9 585 aa6.96□□□□□ -1.3
TOPBP1-202ENST00000503338 AKR7A2O43488 359 aa6.96□□□□□ -1.3
TOPBP1-202ENST00000503338 CDC14BO60729 498 aa6.96□□□□□ -1.3
TOPBP1-202ENST00000503338 CRTAPO75718 401 aaPredicted RBP6.96□□□□□ -1.3
TOPBP1-202ENST00000503338 CLDN14O95500 239 aa6.96□□□□□ -1.3
TOPBP1-202ENST00000503338 MPIG6BO95866 241 aa6.96□□□□□ -1.3
TOPBP1-202ENST00000503338 ECDO95905 644 aaPredicted RBP6.96□□□□□ -1.3
TOPBP1-202ENST00000503338 IGHV3-13P01766 116 aa6.96□□□□□ -1.3
TOPBP1-202ENST00000503338 HLA-DQB1P01920 261 aa6.96□□□□□ -1.3
TOPBP1-202ENST00000503338 FAM90A15PP0C7V4 464 aa6.96□□□□□ -1.3
TOPBP1-202ENST00000503338 FAM90A13PP0C7W8 464 aa6.96□□□□□ -1.3
TOPBP1-202ENST00000503338 FAM90A14PP0C7W9 464 aa6.96□□□□□ -1.3
TOPBP1-202ENST00000503338 FAM90A24PP0C7X0 464 aa6.96□□□□□ -1.3
TOPBP1-202ENST00000503338 IL7P13232 177 aa6.96□□□□□ -1.3
TOPBP1-202ENST00000503338 HAAOP46952 286 aa6.96□□□□□ -1.3
TOPBP1-202ENST00000503338 GPM6AP51674 278 aa6.96□□□□□ -1.3
TOPBP1-202ENST00000503338 KLF3P57682 345 aaPredicted RBP6.96□□□□□ -1.3
TOPBP1-202ENST00000503338 TAS2R20P59543 309 aa6.96□□□□□ -1.3
TOPBP1-202ENST00000503338 ERVS71-1P61550 626 aa6.96□□□□□ -1.3
TOPBP1-202ENST00000503338 RPS27AP62979 156 aaKnown RBP6.96□□□□□ -1.3
TOPBP1-202ENST00000503338 IL24Q13007 206 aa6.96□□□□□ -1.3
TOPBP1-202ENST00000503338 ESPL1Q14674 2120 aa6.96□□□□□ -1.3
TOPBP1-202ENST00000503338 OR8G1Q15617 311 aa6.96□□□□□ -1.3
TOPBP1-202ENST00000503338 SLC22A6Q4U2R8 563 aa6.96□□□□□ -1.3
TOPBP1-202ENST00000503338 BEX5Q5H9J7 111 aa6.96□□□□□ -1.3
TOPBP1-202ENST00000503338 FAM76BQ5HYJ3 339 aa6.96□□□□□ -1.3
TOPBP1-202ENST00000503338 ALKBH2Q6NS38 261 aa6.96□□□□□ -1.3
TOPBP1-202ENST00000503338 LYSMD2Q8IV50 215 aa6.96□□□□□ -1.3
TOPBP1-202ENST00000503338 Q8IYB0 196 aa6.96□□□□□ -1.3
TOPBP1-202ENST00000503338 BHLHE23Q8NDY6 225 aa6.96□□□□□ -1.3
TOPBP1-202ENST00000503338 OR4M2Q8NGB6 313 aa6.96□□□□□ -1.3
TOPBP1-202ENST00000503338 SMIM4Q8WVI0 70 aa6.96□□□□□ -1.3
TOPBP1-202ENST00000503338 HPSE2Q8WWQ2 592 aa6.96□□□□□ -1.3
TOPBP1-202ENST00000503338 FCAMRQ8WWV6 532 aa6.96□□□□□ -1.3
TOPBP1-202ENST00000503338 WFIKKN1Q96NZ8 548 aa6.96□□□□□ -1.3
TOPBP1-202ENST00000503338 SDHCQ99643 169 aaPredicted RBP6.96□□□□□ -1.3
TOPBP1-202ENST00000503338 C7orf50Q9BRJ6 194 aaKnown RBP6.96□□□□□ -1.3
TOPBP1-202ENST00000503338 THAP7Q9BT49 309 aaPredicted RBP6.96□□□□□ -1.3
TOPBP1-202ENST00000503338 ADAT1Q9BUB4 502 aaKnown RBP6.96□□□□□ -1.3
TOPBP1-202ENST00000503338 TM2D1Q9BX74 207 aa6.96□□□□□ -1.3
TOPBP1-202ENST00000503338 CXXC4Q9H2H0 198 aa6.96□□□□□ -1.3
TOPBP1-202ENST00000503338 SCPEP1Q9HB40 452 aa6.96□□□□□ -1.3
TOPBP1-202ENST00000503338 ELL3Q9HB65 397 aaPredicted RBP6.96□□□□□ -1.3
TOPBP1-202ENST00000503338 TAS2R8Q9NYW2 309 aa6.96□□□□□ -1.3
TOPBP1-202ENST00000503338 MRPS7Q9Y2R9 242 aaKnown RBP6.96□□□□□ -1.3
TOPBP1-202ENST00000503338 CACNA1BQ00975 2339 aa6.96□□□□□ -1.3
TOPBP1-202ENST00000503338 IGKV1-27A0A075B6S5 117 aa6.95□□□□□ -1.3
TOPBP1-202ENST00000503338 PLSCR5A0PG75 271 aa6.95□□□□□ -1.3
TOPBP1-202ENST00000503338 TUBAL3A6NHL2 446 aa6.95□□□□□ -1.3
TOPBP1-202ENST00000503338 CENPXA8MT69 81 aa6.95□□□□□ -1.3
TOPBP1-202ENST00000503338 SERPINE3A8MV23 424 aa6.95□□□□□ -1.3
TOPBP1-202ENST00000503338 ATP6V1G2-DDX39BF2Z307 99 aa6.95□□□□□ -1.3
TOPBP1-202ENST00000503338 TRAPPC2LH3BP13 241 aa6.95□□□□□ -1.3
TOPBP1-202ENST00000503338 J3QT63 122 aa6.95□□□□□ -1.3
TOPBP1-202ENST00000503338 ABCD4O14678 606 aa6.95□□□□□ -1.3
TOPBP1-202ENST00000503338 PTTG1O95997 202 aa6.95□□□□□ -1.3
TOPBP1-202ENST00000503338 THBDP07204 575 aa6.95□□□□□ -1.3
TOPBP1-202ENST00000503338 CD3EP07766 207 aa6.95□□□□□ -1.3
TOPBP1-202ENST00000503338 ACAA1P09110 424 aaPredicted RBP6.95□□□□□ -1.3
TOPBP1-202ENST00000503338 GSTP1P09211 210 aaKnown RBP6.95□□□□□ -1.3
TOPBP1-202ENST00000503338 CSF3P09919 207 aa6.95□□□□□ -1.3
TOPBP1-202ENST00000503338 MGMTP16455 207 aa6.95□□□□□ -1.3
TOPBP1-202ENST00000503338 SERPINA2P20848 420 aa6.95□□□□□ -1.3
TOPBP1-202ENST00000503338 GNLYP22749 145 aa6.95□□□□□ -1.3
TOPBP1-202ENST00000503338 CA6P23280 308 aa6.95□□□□□ -1.3
TOPBP1-202ENST00000503338 MPZP25189 248 aa6.95□□□□□ -1.3
TOPBP1-202ENST00000503338 PRSS3P35030 304 aa6.95□□□□□ -1.3
TOPBP1-202ENST00000503338 MPV17P39210 176 aa6.95□□□□□ -1.3
TOPBP1-202ENST00000503338 PTH2RP49190 550 aa6.95□□□□□ -1.3
TOPBP1-202ENST00000503338 FABP6P51161 128 aa6.95□□□□□ -1.3
TOPBP1-202ENST00000503338 EFNB2P52799 333 aa6.95□□□□□ -1.3
TOPBP1-202ENST00000503338 PRSS12P56730 875 aa6.95□□□□□ -1.3
TOPBP1-202ENST00000503338 ACTBP60709 375 aa6.95□□□□□ -1.3
TOPBP1-202ENST00000503338 ACTG1P63261 375 aa6.95□□□□□ -1.3
TOPBP1-202ENST00000503338 UNC119Q13432 240 aa6.95□□□□□ -1.3
TOPBP1-202ENST00000503338 ASAH1Q13510 395 aa6.95□□□□□ -1.3
TOPBP1-202ENST00000503338 PNLIPRP3Q17RR3 467 aa6.95□□□□□ -1.3
TOPBP1-202ENST00000503338 NCMAPQ5T1S8 102 aa6.95□□□□□ -1.3
Retrieved 100 of 20,778 RNA–protein pairs in 60.2 ms