RNA–Protein interactions for RNA: ENST00000498254.5

CALD1-224, Transcript of caldesmon 1, humanhuman

TSL 3

Gene CALD1, Length 443 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CALD1-224ENST00000498254 GINS1Q14691 196 aa2.5□□□□□ -2.01
CALD1-224ENST00000498254 TAF1AQ15573 450 aaPredicted RBP2.5□□□□□ -2.01
CALD1-224ENST00000498254 TRIP13Q15645 432 aaPredicted RBP2.5□□□□□ -2.01
CALD1-224ENST00000498254 TOMM34Q15785 309 aaPredicted RBP2.5□□□□□ -2.01
CALD1-224ENST00000498254 SNRNP35Q16560 246 aaKnown RBP2.5□□□□□ -2.01
CALD1-224ENST00000498254 TMEM249Q2WGJ8 235 aa2.5□□□□□ -2.01
CALD1-224ENST00000498254 C5orf47Q569G3 176 aa2.5□□□□□ -2.01
CALD1-224ENST00000498254 HACD4Q5VWC8 232 aa2.5□□□□□ -2.01
CALD1-224ENST00000498254 H2AFVQ71UI9 128 aa2.5□□□□□ -2.01
CALD1-224ENST00000498254 ZNF429Q86V71 674 aa2.5□□□□□ -2.01
CALD1-224ENST00000498254 UNC93AQ86WB7 457 aa2.5□□□□□ -2.01
CALD1-224ENST00000498254 HS3ST5Q8IZT8 346 aa2.5□□□□□ -2.01
CALD1-224ENST00000498254 SPAG16Q8N0X2 631 aa2.5□□□□□ -2.01
CALD1-224ENST00000498254 STK40Q8N2I9 435 aa2.5□□□□□ -2.01
CALD1-224ENST00000498254 C12orf29Q8N999 325 aa2.5□□□□□ -2.01
CALD1-224ENST00000498254 DUSP18Q8NEJ0 188 aa2.5□□□□□ -2.01
CALD1-224ENST00000498254 OR5AR1Q8NGP9 310 aa2.5□□□□□ -2.01
CALD1-224ENST00000498254 BLOC1S5Q8TDH9 187 aa2.5□□□□□ -2.01
CALD1-224ENST00000498254 RASSF5Q8WWW0 418 aa2.5□□□□□ -2.01
CALD1-224ENST00000498254 BAALCQ8WXS3 180 aa2.5□□□□□ -2.01
CALD1-224ENST00000498254 TFGQ92734 400 aaPredicted RBP2.5□□□□□ -2.01
CALD1-224ENST00000498254 HGDQ93099 445 aa2.5□□□□□ -2.01
CALD1-224ENST00000498254 YIPF5Q969M3 257 aa2.5□□□□□ -2.01
CALD1-224ENST00000498254 EXOSC8Q96B26 276 aaKnown RBP2.5□□□□□ -2.01
CALD1-224ENST00000498254 CREB3L1Q96BA8 519 aa2.5□□□□□ -2.01
CALD1-224ENST00000498254 NAPGQ99747 312 aaPredicted RBP2.5□□□□□ -2.01
CALD1-224ENST00000498254 PRRT1Q99946 306 aa2.5□□□□□ -2.01
CALD1-224ENST00000498254 BEX2Q9BXY8 128 aa2.5□□□□□ -2.01
CALD1-224ENST00000498254 ZNF717Q9BY31 904 aaPredicted RBP2.5□□□□□ -2.01
CALD1-224ENST00000498254 SRRQ9GZT4 340 aa2.5□□□□□ -2.01
CALD1-224ENST00000498254 DEFB129Q9H1M3 183 aa2.5□□□□□ -2.01
CALD1-224ENST00000498254 SPNS1Q9H2V7 528 aa2.5□□□□□ -2.01
CALD1-224ENST00000498254 C11orf49Q9H6J7 331 aa2.5□□□□□ -2.01
CALD1-224ENST00000498254 PATZ1Q9HBE1 687 aaKnown RBP2.5□□□□□ -2.01
CALD1-224ENST00000498254 MYOZ1Q9NP98 299 aaPredicted RBP2.5□□□□□ -2.01
CALD1-224ENST00000498254 OR2S2Q9NQN1 319 aa2.5□□□□□ -2.01
CALD1-224ENST00000498254 SIRT7Q9NRC8 400 aa2.5□□□□□ -2.01
CALD1-224ENST00000498254 PRR34Q9NV39 138 aa2.5□□□□□ -2.01
CALD1-224ENST00000498254 OPN4Q9UHM6 478 aa2.5□□□□□ -2.01
CALD1-224ENST00000498254 RWDD2AQ9UIY3 292 aa2.5□□□□□ -2.01
CALD1-224ENST00000498254 STOML2Q9UJZ1 356 aa2.5□□□□□ -2.01
CALD1-224ENST00000498254 PSG8Q9UQ74 426 aa2.5□□□□□ -2.01
CALD1-224ENST00000498254 NDUFAF1Q9Y375 327 aa2.5□□□□□ -2.01
CALD1-224ENST00000498254 PRELID3BQ9Y3B1 194 aa2.5□□□□□ -2.01
CALD1-224ENST00000498254 TSSC4Q9Y5U2 329 aaPredicted RBP2.5□□□□□ -2.01
CALD1-224ENST00000498254 ZFYVE9O95405 1425 aa2.5□□□□□ -2.01
CALD1-224ENST00000498254 ADGRL3Q9HAR2 1447 aa2.5□□□□□ -2.01
CALD1-224ENST00000498254 EIF3AQ14152 1382 aaKnown RBP2.49□□□□□ -2.01
CALD1-224ENST00000498254 ADGRA3Q8IWK6 1321 aa2.49□□□□□ -2.01
CALD1-224ENST00000498254 RFPL4AA6NLU0 287 aa2.49□□□□□ -2.01
CALD1-224ENST00000498254 RFPL4AL1F8VTS6 287 aa2.49□□□□□ -2.01
CALD1-224ENST00000498254 INS-IGF2F8WCM5 200 aa2.49□□□□□ -2.01
CALD1-224ENST00000498254 H3BN98 237 aa2.49□□□□□ -2.01
CALD1-224ENST00000498254 MKRN2OSH3BPM6 223 aa2.49□□□□□ -2.01
CALD1-224ENST00000498254 TMX2-CTNND1H3BSU7 103 aa2.49□□□□□ -2.01
CALD1-224ENST00000498254 PANO1I0J062 215 aa2.49□□□□□ -2.01
CALD1-224ENST00000498254 M0QZ92 97 aa2.49□□□□□ -2.01
CALD1-224ENST00000498254 CCRL2O00421 344 aa2.49□□□□□ -2.01
CALD1-224ENST00000498254 TXNDC9O14530 226 aa2.49□□□□□ -2.01
CALD1-224ENST00000498254 AQP9O43315 295 aa2.49□□□□□ -2.01
CALD1-224ENST00000498254 GMDSO60547 372 aa2.49□□□□□ -2.01
CALD1-224ENST00000498254 CST8O60676 142 aa2.49□□□□□ -2.01
CALD1-224ENST00000498254 EIF1BO60739 113 aaKnown RBP2.49□□□□□ -2.01
CALD1-224ENST00000498254 ENTPD5O75356 428 aa2.49□□□□□ -2.01
CALD1-224ENST00000498254 PCCAP05165 728 aaPredicted RBP2.49□□□□□ -2.01
CALD1-224ENST00000498254 KLK1P06870 262 aa2.49□□□□□ -2.01
CALD1-224ENST00000498254 HOXC4P09017 264 aaPredicted RBP2.49□□□□□ -2.01
CALD1-224ENST00000498254 ZDHHC11BP0C7U3 371 aa2.49□□□□□ -2.01
CALD1-224ENST00000498254 FAM228BP0C875 321 aa2.49□□□□□ -2.01
CALD1-224ENST00000498254 SLC35E2BP0CK96 405 aa2.49□□□□□ -2.01
CALD1-224ENST00000498254 HSPD1P10809 573 aaKnown RBP2.49□□□□□ -2.01
CALD1-224ENST00000498254 THRAP10827 490 aa2.49□□□□□ -2.01
CALD1-224ENST00000498254 ERGP11308 486 aa2.49□□□□□ -2.01
CALD1-224ENST00000498254 PSMC3P17980 439 aa2.49□□□□□ -2.01
CALD1-224ENST00000498254 PHBP35232 272 aa2.49□□□□□ -2.01
CALD1-224ENST00000498254 RCVRNP35243 200 aa2.49□□□□□ -2.01
CALD1-224ENST00000498254 COILP38432 576 aaPredicted RBP2.49□□□□□ -2.01
CALD1-224ENST00000498254 EIF1P41567 113 aaKnown RBP2.49□□□□□ -2.01
CALD1-224ENST00000498254 MAGEA6P43360 314 aa2.49□□□□□ -2.01
CALD1-224ENST00000498254 TGM4P49221 684 aa2.49□□□□□ -2.01
CALD1-224ENST00000498254 EIF2B2P49770 351 aaKnown RBP2.49□□□□□ -2.01
CALD1-224ENST00000498254 LHX2P50458 406 aa2.49□□□□□ -2.01
CALD1-224ENST00000498254 CDK9P50750 372 aaKnown RBP2.49□□□□□ -2.01
CALD1-224ENST00000498254 ZNF136P52737 540 aa2.49□□□□□ -2.01
CALD1-224ENST00000498254 AP2S1P53680 142 aaPredicted RBP2.49□□□□□ -2.01
CALD1-224ENST00000498254 VSX2P58304 361 aaPredicted RBP2.49□□□□□ -2.01
CALD1-224ENST00000498254 RPS23P62266 143 aaKnown RBP2.49□□□□□ -2.01
CALD1-224ENST00000498254 ARF6P62330 175 aa2.49□□□□□ -2.01
CALD1-224ENST00000498254 RBX1P62877 108 aa2.49□□□□□ -2.01
CALD1-224ENST00000498254 PAFAH1B2P68402 229 aa2.49□□□□□ -2.01
CALD1-224ENST00000498254 CKAP4Q07065 602 aaKnown RBP2.49□□□□□ -2.01
CALD1-224ENST00000498254 BNIP2Q12982 314 aa2.49□□□□□ -2.01
CALD1-224ENST00000498254 TMED2Q15363 201 aa2.49□□□□□ -2.01
CALD1-224ENST00000498254 PSG3Q16557 428 aa2.49□□□□□ -2.01
CALD1-224ENST00000498254 GUK1Q16774 197 aa2.49□□□□□ -2.01
CALD1-224ENST00000498254 NDUFAF6Q330K2 333 aa2.49□□□□□ -2.01
CALD1-224ENST00000498254 GCSAMLQ5JQS6 135 aa2.49□□□□□ -2.01
CALD1-224ENST00000498254 ZFP1Q6P2D0 407 aa2.49□□□□□ -2.01
CALD1-224ENST00000498254 ARL9Q6T311 187 aa2.49□□□□□ -2.01
CALD1-224ENST00000498254 LYPD2Q6UXB3 125 aa2.49□□□□□ -2.01
Retrieved 100 of 20,778 RNA–protein pairs in 41 ms