RNA–Protein interactions for RNA: ENST00000495981.5

VPS52-222, Transcript of VPS52, GARP complex subunit, humanhuman

TSL 1 (best)

Gene VPS52, Length 743 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS52-222ENST00000495981 EMC6Q9BV81 110 aa3.5□□□□□ -1.85
VPS52-222ENST00000495981 ULBP2Q9BZM5 246 aa3.5□□□□□ -1.85
VPS52-222ENST00000495981 ROPN1Q9HAT0 212 aaPredicted RBP3.5□□□□□ -1.85
VPS52-222ENST00000495981 TPT1P8Q9HAU6 139 aa3.5□□□□□ -1.85
VPS52-222ENST00000495981 PALMDQ9NP74 551 aa3.5□□□□□ -1.85
VPS52-222ENST00000495981 SLC52A3Q9NQ40 469 aa3.5□□□□□ -1.85
VPS52-222ENST00000495981 TMEM38BQ9NVV0 291 aa3.5□□□□□ -1.85
VPS52-222ENST00000495981 WIPI2Q9Y4P8 454 aa3.5□□□□□ -1.85
VPS52-222ENST00000495981 UGT2A1Q9Y4X1 527 aa3.5□□□□□ -1.85
VPS52-222ENST00000495981 PPIAL4AQ9Y536 164 aa3.5□□□□□ -1.85
VPS52-222ENST00000495981 ARHGAP32A7KAX9 2087 aa3.49□□□□□ -1.85
VPS52-222ENST00000495981 A0A1W2PN81 502 aa3.49□□□□□ -1.85
VPS52-222ENST00000495981 WDR91A4D1P6 747 aa3.49□□□□□ -1.85
VPS52-222ENST00000495981 ANKRD61A6NGH8 418 aa3.49□□□□□ -1.85
VPS52-222ENST00000495981 HNRNPCL2B2RXH8 293 aa3.49□□□□□ -1.85
VPS52-222ENST00000495981 CLDN25C9JDP6 229 aa3.49□□□□□ -1.85
VPS52-222ENST00000495981 PLPP3O14495 311 aa3.49□□□□□ -1.85
VPS52-222ENST00000495981 HDAC3O15379 428 aa3.49□□□□□ -1.85
VPS52-222ENST00000495981 PPIHO43447 177 aaKnown RBP3.49□□□□□ -1.85
VPS52-222ENST00000495981 OR2T1O43869 369 aa3.49□□□□□ -1.85
VPS52-222ENST00000495981 GMNNO75496 209 aa3.49□□□□□ -1.85
VPS52-222ENST00000495981 OR6A2O95222 327 aa3.49□□□□□ -1.85
VPS52-222ENST00000495981 RAB36O95755 333 aa3.49□□□□□ -1.85
VPS52-222ENST00000495981 CLPTM1O96005 669 aa3.49□□□□□ -1.85
VPS52-222ENST00000495981 IGHV1-46P01743 117 aa3.49□□□□□ -1.85
VPS52-222ENST00000495981 OPN1MWP04001 364 aa3.49□□□□□ -1.85
VPS52-222ENST00000495981 SERPINA5P05154 406 aa3.49□□□□□ -1.85
VPS52-222ENST00000495981 IL6P05231 212 aa3.49□□□□□ -1.85
VPS52-222ENST00000495981 OPN1MW2P0DN77 364 aa3.49□□□□□ -1.85
VPS52-222ENST00000495981 OPN1MW3P0DN78 364 aa3.49□□□□□ -1.85
VPS52-222ENST00000495981 CD79AP11912 226 aa3.49□□□□□ -1.85
VPS52-222ENST00000495981 CCL2P13500 99 aa3.49□□□□□ -1.85
VPS52-222ENST00000495981 IDO1P14902 403 aa3.49□□□□□ -1.85
VPS52-222ENST00000495981 ETS2P15036 469 aa3.49□□□□□ -1.85
VPS52-222ENST00000495981 OMGP23515 440 aa3.49□□□□□ -1.85
VPS52-222ENST00000495981 CHRNA7P36544 502 aa3.49□□□□□ -1.85
VPS52-222ENST00000495981 MPV17P39210 176 aa3.49□□□□□ -1.85
VPS52-222ENST00000495981 CRATP43155 626 aa3.49□□□□□ -1.85
VPS52-222ENST00000495981 CSNK1A1P48729 337 aa3.49□□□□□ -1.85
VPS52-222ENST00000495981 ZNF133P52736 654 aaPredicted RBP3.49□□□□□ -1.85
VPS52-222ENST00000495981 GBX2P52951 348 aaPredicted RBP3.49□□□□□ -1.85
VPS52-222ENST00000495981 AQP5P55064 265 aa3.49□□□□□ -1.85
VPS52-222ENST00000495981 KLF3P57682 345 aaPredicted RBP3.49□□□□□ -1.85
VPS52-222ENST00000495981 COPZ1P61923 177 aa3.49□□□□□ -1.85
VPS52-222ENST00000495981 HERV-K104P63124 156 aa3.49□□□□□ -1.85
VPS52-222ENST00000495981 CCL8P80075 99 aa3.49□□□□□ -1.85
VPS52-222ENST00000495981 FADDQ13158 208 aa3.49□□□□□ -1.85
VPS52-222ENST00000495981 C1DQ13901 141 aaKnown RBP3.49□□□□□ -1.85
VPS52-222ENST00000495981 ZNF74Q16587 644 aa3.49□□□□□ -1.85
VPS52-222ENST00000495981 HIST3H3Q16695 136 aa3.49□□□□□ -1.85
VPS52-222ENST00000495981 TRMT5Q32P41 509 aaKnown RBP3.49□□□□□ -1.85
VPS52-222ENST00000495981 ALKBH6Q3KRA9 238 aa3.49□□□□□ -1.85
VPS52-222ENST00000495981 ZNF311Q5JNZ3 666 aa3.49□□□□□ -1.85
VPS52-222ENST00000495981 SLC35D3Q5M8T2 416 aa3.49□□□□□ -1.85
VPS52-222ENST00000495981 KPRPQ5T749 579 aaPredicted RBP3.49□□□□□ -1.85
VPS52-222ENST00000495981 ASPHD2Q6ICH7 369 aa3.49□□□□□ -1.85
VPS52-222ENST00000495981 FAM159AQ6UWV7 190 aa3.49□□□□□ -1.85
VPS52-222ENST00000495981 ZNF621Q6ZSS3 439 aa3.49□□□□□ -1.85
VPS52-222ENST00000495981 ZNF554Q86TJ5 538 aa3.49□□□□□ -1.85
VPS52-222ENST00000495981 NUDCD3Q8IVD9 361 aa3.49□□□□□ -1.85
VPS52-222ENST00000495981 SKA3Q8IX90 412 aa3.49□□□□□ -1.85
VPS52-222ENST00000495981 KIRREL3Q8IZU9 778 aa3.49□□□□□ -1.85
VPS52-222ENST00000495981 MUC20Q8N307 709 aaPredicted RBP3.49□□□□□ -1.85
VPS52-222ENST00000495981 PRSS35Q8N3Z0 413 aa3.49□□□□□ -1.85
VPS52-222ENST00000495981 SLC30A7Q8NEW0 376 aa3.49□□□□□ -1.85
VPS52-222ENST00000495981 GPR32P1Q8NGA4 272 aa3.49□□□□□ -1.85
VPS52-222ENST00000495981 OR4D11Q8NGI4 311 aa3.49□□□□□ -1.85
VPS52-222ENST00000495981 ZNF418Q8TF45 676 aaPredicted RBP3.49□□□□□ -1.85
VPS52-222ENST00000495981 C22orf15Q8WYQ4 148 aa3.49□□□□□ -1.85
VPS52-222ENST00000495981 RAB39BQ96DA2 213 aa3.49□□□□□ -1.85
VPS52-222ENST00000495981 ITCHQ96J02 903 aa3.49□□□□□ -1.85
VPS52-222ENST00000495981 URM1Q9BTM9 101 aaKnown RBP3.49□□□□□ -1.85
VPS52-222ENST00000495981 SUCNR1Q9BXA5 334 aa3.49□□□□□ -1.85
VPS52-222ENST00000495981 NMNAT2Q9BZQ4 307 aa3.49□□□□□ -1.85
VPS52-222ENST00000495981 ROPN1BQ9BZX4 212 aaPredicted RBP3.49□□□□□ -1.85
VPS52-222ENST00000495981 OR51B6Q9H340 312 aa3.49□□□□□ -1.85
VPS52-222ENST00000495981 SLCO1B3Q9NPD5 702 aa3.49□□□□□ -1.85
VPS52-222ENST00000495981 DDX28Q9NUL7 540 aaKnown RBP3.49□□□□□ -1.85
VPS52-222ENST00000495981 ACOXLQ9NUZ1 547 aa3.49□□□□□ -1.85
VPS52-222ENST00000495981 THUMPD1Q9NXG2 353 aaKnown RBP3.49□□□□□ -1.85
VPS52-222ENST00000495981 FBXL3Q9UKT7 428 aa3.49□□□□□ -1.85
VPS52-222ENST00000495981 ZNF346Q9UL40 294 aaKnown RBP3.49□□□□□ -1.85
VPS52-222ENST00000495981 SLC7A7Q9UM01 511 aa3.49□□□□□ -1.85
VPS52-222ENST00000495981 SOX21Q9Y651 276 aaPredicted RBP3.49□□□□□ -1.85
VPS52-222ENST00000495981 WNK2Q9Y3S1 2297 aa3.49□□□□□ -1.85
VPS52-222ENST00000495981 PPIAL4EA0A075B759 164 aa3.48□□□□□ -1.85
VPS52-222ENST00000495981 IGKV1D-43A0A0B4J1Z2 117 aa3.48□□□□□ -1.85
VPS52-222ENST00000495981 PPIAL4CA0A0B4J2A2 164 aa3.48□□□□□ -1.85
VPS52-222ENST00000495981 TMEM120BA0PK00 339 aa3.48□□□□□ -1.85
VPS52-222ENST00000495981 ZNF732B4DXR9 585 aa3.48□□□□□ -1.85
VPS52-222ENST00000495981 PPIAL4DF5H284 164 aa3.48□□□□□ -1.85
VPS52-222ENST00000495981 CLDN34H7C241 214 aa3.48□□□□□ -1.85
VPS52-222ENST00000495981 SYT7O43581 403 aa3.48□□□□□ -1.85
VPS52-222ENST00000495981 CHP2O43745 196 aa3.48□□□□□ -1.85
VPS52-222ENST00000495981 MGRN1O60291 552 aa3.48□□□□□ -1.85
VPS52-222ENST00000495981 MTRF1O75570 445 aaKnown RBP3.48□□□□□ -1.85
VPS52-222ENST00000495981 IGHV3-13P01766 116 aa3.48□□□□□ -1.85
VPS52-222ENST00000495981 IGHMP01871 453 aa3.48□□□□□ -1.85
VPS52-222ENST00000495981 CD55P08174 381 aa3.48□□□□□ -1.85
VPS52-222ENST00000495981 ASAH2BP0C7U1 165 aa3.48□□□□□ -1.85
Retrieved 100 of 20,778 RNA–protein pairs in 72.4 ms