RNA–Protein interactions for RNA: ENST00000494486.1

TRIM59-206, Transcript of tripartite motif containing 59, humanhuman

TSL 3

Gene TRIM59, Length 577 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM59-206ENST00000494486 ZNF596Q8TC21 504 aa8.4□□□□□ -1.06
TRIM59-206ENST00000494486 RNF166Q96A37 237 aaPredicted RBP8.4□□□□□ -1.06
TRIM59-206ENST00000494486 CREB3L1Q96BA8 519 aa8.4□□□□□ -1.06
TRIM59-206ENST00000494486 KCTD12Q96CX2 325 aaKnown RBP8.4□□□□□ -1.06
TRIM59-206ENST00000494486 BPIFA2Q96DR5 249 aa8.4□□□□□ -1.06
TRIM59-206ENST00000494486 Q96M85 177 aa8.4□□□□□ -1.06
TRIM59-206ENST00000494486 ZNF714Q96N38 554 aa8.4□□□□□ -1.06
TRIM59-206ENST00000494486 NUAK2Q9H093 628 aa8.4□□□□□ -1.06
TRIM59-206ENST00000494486 OR51J1Q9H342 316 aa8.4□□□□□ -1.06
TRIM59-206ENST00000494486 NMNAT1Q9HAN9 279 aaPredicted RBP8.4□□□□□ -1.06
TRIM59-206ENST00000494486 ABCB9Q9NP78 766 aa8.4□□□□□ -1.06
TRIM59-206ENST00000494486 PNRC2Q9NPJ4 139 aaKnown RBP8.4□□□□□ -1.06
TRIM59-206ENST00000494486 SIGLEC8Q9NYZ4 499 aa8.4□□□□□ -1.06
TRIM59-206ENST00000494486 VSIG4Q9Y279 399 aa8.4□□□□□ -1.06
TRIM59-206ENST00000494486 VPS13DQ5THJ4 4388 aa8.39□□□□□ -1.07
TRIM59-206ENST00000494486 FAM90A18PA6NE21 464 aa8.39□□□□□ -1.07
TRIM59-206ENST00000494486 FAM90A16PA6NEW6 464 aa8.39□□□□□ -1.07
TRIM59-206ENST00000494486 FAM90A20PA6NIJ5 464 aa8.39□□□□□ -1.07
TRIM59-206ENST00000494486 FAM90A9PA6NNJ1 464 aa8.39□□□□□ -1.07
TRIM59-206ENST00000494486 FAM90A12PA8MX19 464 aa8.39□□□□□ -1.07
TRIM59-206ENST00000494486 FAM90A5PA8MXJ8 464 aa8.39□□□□□ -1.07
TRIM59-206ENST00000494486 OOSP1A8MZH6 123 aa8.39□□□□□ -1.07
TRIM59-206ENST00000494486 IGLV1-51P01701 117 aa8.39□□□□□ -1.07
TRIM59-206ENST00000494486 TK1P04183 234 aa8.39□□□□□ -1.07
TRIM59-206ENST00000494486 CD14P08571 375 aa8.39□□□□□ -1.07
TRIM59-206ENST00000494486 FAM90A15PP0C7V4 464 aa8.39□□□□□ -1.07
TRIM59-206ENST00000494486 FAM90A13PP0C7W8 464 aa8.39□□□□□ -1.07
TRIM59-206ENST00000494486 FAM90A14PP0C7W9 464 aa8.39□□□□□ -1.07
TRIM59-206ENST00000494486 FAM90A24PP0C7X0 464 aa8.39□□□□□ -1.07
TRIM59-206ENST00000494486 PSMB8P28062 276 aa8.39□□□□□ -1.07
TRIM59-206ENST00000494486 DCTDP32321 178 aa8.39□□□□□ -1.07
TRIM59-206ENST00000494486 FAM3AP98173 230 aa8.39□□□□□ -1.07
TRIM59-206ENST00000494486 PITPNAQ00169 270 aa8.39□□□□□ -1.07
TRIM59-206ENST00000494486 KCTD8Q6ZWB6 473 aa8.39□□□□□ -1.07
TRIM59-206ENST00000494486 PATL1Q86TB9 770 aaKnown RBP8.39□□□□□ -1.07
TRIM59-206ENST00000494486 RTN4RL2Q86UN3 420 aa8.39□□□□□ -1.07
TRIM59-206ENST00000494486 GTSCR1Q86UQ5 136 aa8.39□□□□□ -1.07
TRIM59-206ENST00000494486 LINC00346Q8IVM7 164 aa8.39□□□□□ -1.07
TRIM59-206ENST00000494486 ZNF671Q8TAW3 534 aa8.39□□□□□ -1.07
TRIM59-206ENST00000494486 MYOZ3Q8TDC0 251 aa8.39□□□□□ -1.07
TRIM59-206ENST00000494486 ARPC1AQ92747 370 aa8.39□□□□□ -1.07
TRIM59-206ENST00000494486 FAM46AQ96IP4 442 aaKnown RBP8.39□□□□□ -1.07
TRIM59-206ENST00000494486 ZNF570Q96NI8 536 aa8.39□□□□□ -1.07
TRIM59-206ENST00000494486 PAPOLGQ9BWT3 736 aaKnown RBP8.39□□□□□ -1.07
TRIM59-206ENST00000494486 PAIP1Q9H074 479 aaKnown RBP8.39□□□□□ -1.07
TRIM59-206ENST00000494486 KRCC1Q9NPI7 259 aaPredicted RBP8.39□□□□□ -1.07
TRIM59-206ENST00000494486 STUB1Q9UNE7 303 aa8.39□□□□□ -1.07
TRIM59-206ENST00000494486 ADAM18Q9Y3Q7 739 aa8.39□□□□□ -1.07
TRIM59-206ENST00000494486 MPC1Q9Y5U8 109 aa8.39□□□□□ -1.07
TRIM59-206ENST00000494486 HSPG2P98160 4391 aa8.38□□□□□ -1.07
TRIM59-206ENST00000494486 TRAV27A0A087WT01 109 aa8.38□□□□□ -1.07
TRIM59-206ENST00000494486 M0QX08 132 aa8.38□□□□□ -1.07
TRIM59-206ENST00000494486 RIPK2O43353 540 aa8.38□□□□□ -1.07
TRIM59-206ENST00000494486 RRP9O43818 475 aaKnown RBP8.38□□□□□ -1.07
TRIM59-206ENST00000494486 SERPINA1P01009 418 aa8.38□□□□□ -1.07
TRIM59-206ENST00000494486 SPARCP09486 303 aa8.38□□□□□ -1.07
TRIM59-206ENST00000494486 IFI30P13284 250 aa8.38□□□□□ -1.07
TRIM59-206ENST00000494486 PPIBP23284 216 aaKnown RBP8.38□□□□□ -1.07
TRIM59-206ENST00000494486 ANOS1P23352 680 aa8.38□□□□□ -1.07
TRIM59-206ENST00000494486 CRABP1P29762 137 aa8.38□□□□□ -1.07
TRIM59-206ENST00000494486 OTX1P32242 354 aaPredicted RBP8.38□□□□□ -1.07
TRIM59-206ENST00000494486 GNB1P62873 340 aa8.38□□□□□ -1.07
TRIM59-206ENST00000494486 CFHR3Q02985 330 aa8.38□□□□□ -1.07
TRIM59-206ENST00000494486 KHDRBS1Q07666 443 aaKnown RBP eCLIP8.38□□□□□ -1.07
TRIM59-206ENST00000494486 FHL1Q13642 323 aa8.38□□□□□ -1.07
TRIM59-206ENST00000494486 TIGD6Q17RP2 521 aa8.38□□□□□ -1.07
TRIM59-206ENST00000494486 SLC36A3Q495N2 470 aa8.38□□□□□ -1.07
TRIM59-206ENST00000494486 LRIF1Q5T3J3 769 aa8.38□□□□□ -1.07
TRIM59-206ENST00000494486 DNM1P34Q6PK57 102 aa8.38□□□□□ -1.07
TRIM59-206ENST00000494486 CCDC80Q76M96 950 aa8.38□□□□□ -1.07
TRIM59-206ENST00000494486 TRMT10CQ7L0Y3 403 aaKnown RBP8.38□□□□□ -1.07
TRIM59-206ENST00000494486 SLC16A9Q7RTY1 509 aa8.38□□□□□ -1.07
TRIM59-206ENST00000494486 OAFQ86UD1 273 aa8.38□□□□□ -1.07
TRIM59-206ENST00000494486 ZNF575Q86XF7 245 aa8.38□□□□□ -1.07
TRIM59-206ENST00000494486 ANKRD13BQ86YJ7 626 aa8.38□□□□□ -1.07
TRIM59-206ENST00000494486 ABHD12Q8N2K0 398 aa8.38□□□□□ -1.07
TRIM59-206ENST00000494486 FTMTQ8N4E7 242 aa8.38□□□□□ -1.07
TRIM59-206ENST00000494486 ZNF491Q8N8L2 437 aa8.38□□□□□ -1.07
TRIM59-206ENST00000494486 FAM156AQ8NDB6 213 aa8.38□□□□□ -1.07
TRIM59-206ENST00000494486 CSNK2A3Q8NEV1 391 aa8.38□□□□□ -1.07
TRIM59-206ENST00000494486 OR5P3Q8WZ94 311 aa8.38□□□□□ -1.07
TRIM59-206ENST00000494486 GTF2H4Q92759 462 aa8.38□□□□□ -1.07
TRIM59-206ENST00000494486 NRIP2Q9BQI9 281 aa8.38□□□□□ -1.07
TRIM59-206ENST00000494486 POLR2J2Q9GZM3 115 aaKnown RBP8.38□□□□□ -1.07
TRIM59-206ENST00000494486 POLR2J3Q9H1A7 115 aaKnown RBP8.38□□□□□ -1.07
TRIM59-206ENST00000494486 GNB4Q9HAV0 340 aa8.38□□□□□ -1.07
TRIM59-206ENST00000494486 CYB5R1Q9UHQ9 305 aa8.38□□□□□ -1.07
TRIM59-206ENST00000494486 RIMS3Q9UJD0 308 aa8.38□□□□□ -1.07
TRIM59-206ENST00000494486 RHBDD3Q9Y3P4 386 aa8.38□□□□□ -1.07
TRIM59-206ENST00000494486 SHISA3A0PJX4 238 aa8.37□□□□□ -1.07
TRIM59-206ENST00000494486 ARRDC5A6NEK1 342 aa8.37□□□□□ -1.07
TRIM59-206ENST00000494486 PSMD9O00233 223 aa8.37□□□□□ -1.07
TRIM59-206ENST00000494486 TMEM11P17152 192 aa8.37□□□□□ -1.07
TRIM59-206ENST00000494486 NOS3P29474 1203 aa8.37□□□□□ -1.07
TRIM59-206ENST00000494486 TAS2R41P59536 307 aa8.37□□□□□ -1.07
TRIM59-206ENST00000494486 MEF2CQ06413 473 aaPredicted RBP8.37□□□□□ -1.07
TRIM59-206ENST00000494486 KRR1Q13601 381 aaKnown RBP8.37□□□□□ -1.07
TRIM59-206ENST00000494486 KIAA0141Q14154 515 aaPredicted RBP8.37□□□□□ -1.07
TRIM59-206ENST00000494486 TPTE2P1Q5T6R2 138 aa8.37□□□□□ -1.07
TRIM59-206ENST00000494486 FAM122BQ7Z309 247 aa8.37□□□□□ -1.07
Retrieved 100 of 20,778 RNA–protein pairs in 26.3 ms