RNA–Protein interactions for RNA: ENST00000494402.5

SNX13-210, Transcript of sorting nexin 13, humanhuman

TSL 3

Gene SNX13, Length 453 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX13-210ENST00000494402 AKR1C4P17516 323 aa5.35□□□□□ -1.55
SNX13-210ENST00000494402 MPIP34949 423 aa5.35□□□□□ -1.55
SNX13-210ENST00000494402 VDAC2P45880 294 aaPredicted RBP5.35□□□□□ -1.55
SNX13-210ENST00000494402 EIF4EBP2Q13542 120 aaPredicted RBP5.35□□□□□ -1.55
SNX13-210ENST00000494402 CEACAM16Q2WEN9 425 aa5.35□□□□□ -1.55
SNX13-210ENST00000494402 CCDC58Q4VC31 144 aa5.35□□□□□ -1.55
SNX13-210ENST00000494402 LIN52Q52LA3 116 aa5.35□□□□□ -1.55
SNX13-210ENST00000494402 PYCR3Q53H96 274 aa5.35□□□□□ -1.55
SNX13-210ENST00000494402 C1orf195Q5TG92 126 aa5.35□□□□□ -1.55
SNX13-210ENST00000494402 XKRXQ6PP77 449 aa5.35□□□□□ -1.55
SNX13-210ENST00000494402 UGT2A3Q6UWM9 527 aa5.35□□□□□ -1.55
SNX13-210ENST00000494402 ZNF620Q6ZNG0 422 aa5.35□□□□□ -1.55
SNX13-210ENST00000494402 Q6ZRP5 223 aa5.35□□□□□ -1.55
SNX13-210ENST00000494402 RFLNBQ8N5W9 214 aa5.35□□□□□ -1.55
SNX13-210ENST00000494402 TMEM161BQ8NDZ6 487 aa5.35□□□□□ -1.55
SNX13-210ENST00000494402 OR51S1Q8NGJ8 323 aa5.35□□□□□ -1.55
SNX13-210ENST00000494402 COQ8AQ8NI60 647 aa5.35□□□□□ -1.55
SNX13-210ENST00000494402 NEIL3Q8TAT5 605 aa5.35□□□□□ -1.55
SNX13-210ENST00000494402 SSC4DQ8WTU2 575 aa5.35□□□□□ -1.55
SNX13-210ENST00000494402 BLNKQ8WV28 456 aa5.35□□□□□ -1.55
SNX13-210ENST00000494402 KCTD4Q8WVF5 259 aa5.35□□□□□ -1.55
SNX13-210ENST00000494402 DDB2Q92466 427 aa5.35□□□□□ -1.55
SNX13-210ENST00000494402 RDH5Q92781 318 aa5.35□□□□□ -1.55
SNX13-210ENST00000494402 ZHX1-C8orf76Q96EF9 292 aa5.35□□□□□ -1.55
SNX13-210ENST00000494402 ZNF597Q96LX8 424 aa5.35□□□□□ -1.55
SNX13-210ENST00000494402 BIRC8Q96P09 236 aa5.35□□□□□ -1.55
SNX13-210ENST00000494402 OR2M4Q96R27 311 aa5.35□□□□□ -1.55
SNX13-210ENST00000494402 ZNF2Q9BSG1 426 aaPredicted RBP5.35□□□□□ -1.55
SNX13-210ENST00000494402 TMED9Q9BVK6 235 aa5.35□□□□□ -1.55
SNX13-210ENST00000494402 OCR1Q9BZK8 76 aa5.35□□□□□ -1.55
SNX13-210ENST00000494402 PARLQ9H300 379 aa5.35□□□□□ -1.55
SNX13-210ENST00000494402 OR51I1Q9H343 314 aa5.35□□□□□ -1.55
SNX13-210ENST00000494402 FBXL15Q9H469 300 aa5.35□□□□□ -1.55
SNX13-210ENST00000494402 VSIRQ9H7M9 311 aa5.35□□□□□ -1.55
SNX13-210ENST00000494402 PHF3Q92576 2039 aaKnown RBP5.35□□□□□ -1.55
SNX13-210ENST00000494402 ZBED9Q6R2W3 1325 aa5.34□□□□□ -1.55
SNX13-210ENST00000494402 IGLV1-36A0A0B4J1U3 117 aa5.34□□□□□ -1.55
SNX13-210ENST00000494402 IGHV3OR16-9A0A0B4J2B5 98 aa5.34□□□□□ -1.55
SNX13-210ENST00000494402 ZNF878C9JN71 531 aa5.34□□□□□ -1.55
SNX13-210ENST00000494402 PRSS44E7EML9 344 aa5.34□□□□□ -1.55
SNX13-210ENST00000494402 XKRYO14609 159 aa5.34□□□□□ -1.55
SNX13-210ENST00000494402 KMOO15229 486 aa5.34□□□□□ -1.55
SNX13-210ENST00000494402 FOXH1O75593 365 aa5.34□□□□□ -1.55
SNX13-210ENST00000494402 ERGP11308 486 aa5.34□□□□□ -1.55
SNX13-210ENST00000494402 GNB3P16520 340 aa5.34□□□□□ -1.55
SNX13-210ENST00000494402 PAX6P26367 422 aa5.34□□□□□ -1.55
SNX13-210ENST00000494402 MARK3P27448 753 aa5.34□□□□□ -1.55
SNX13-210ENST00000494402 VSX2P58304 361 aaPredicted RBP5.34□□□□□ -1.55
SNX13-210ENST00000494402 BTN3A2P78410 334 aa5.34□□□□□ -1.55
SNX13-210ENST00000494402 CD300CQ08708 224 aa5.34□□□□□ -1.55
SNX13-210ENST00000494402 SIX1Q15475 284 aaPredicted RBP5.34□□□□□ -1.55
SNX13-210ENST00000494402 PRSS8Q16651 343 aa5.34□□□□□ -1.55
SNX13-210ENST00000494402 CCDC153Q494R4 210 aa5.34□□□□□ -1.55
SNX13-210ENST00000494402 TTC32Q5I0X7 151 aa5.34□□□□□ -1.55
SNX13-210ENST00000494402 TEX30Q5JUR7 227 aa5.34□□□□□ -1.55
SNX13-210ENST00000494402 SLC35E4Q6ICL7 350 aa5.34□□□□□ -1.55
SNX13-210ENST00000494402 OLIG3Q7RTU3 272 aa5.34□□□□□ -1.55
SNX13-210ENST00000494402 COX18Q8N8Q8 333 aa5.34□□□□□ -1.55
SNX13-210ENST00000494402 WDSUB1Q8N9V3 476 aa5.34□□□□□ -1.55
SNX13-210ENST00000494402 OR13G1Q8NGZ3 307 aa5.34□□□□□ -1.55
SNX13-210ENST00000494402 OR9G1Q8NH87 305 aa5.34□□□□□ -1.55
SNX13-210ENST00000494402 ZNF519Q8TB69 540 aa5.34□□□□□ -1.55
SNX13-210ENST00000494402 LRRC29Q8WV35 223 aa5.34□□□□□ -1.55
SNX13-210ENST00000494402 CYGBQ8WWM9 190 aa5.34□□□□□ -1.55
SNX13-210ENST00000494402 BORCS5Q969J3 196 aa5.34□□□□□ -1.55
SNX13-210ENST00000494402 FAM3DQ96BQ1 224 aa5.34□□□□□ -1.55
SNX13-210ENST00000494402 FAM19A4Q96LR4 140 aa5.34□□□□□ -1.55
SNX13-210ENST00000494402 ZNF747Q9BV97 191 aa5.34□□□□□ -1.55
SNX13-210ENST00000494402 KRTAP3-1Q9BYR8 98 aa5.34□□□□□ -1.55
SNX13-210ENST00000494402 OR11A1Q9GZK7 315 aa5.34□□□□□ -1.55
SNX13-210ENST00000494402 PANK3Q9H999 370 aa5.34□□□□□ -1.55
SNX13-210ENST00000494402 NMNAT1Q9HAN9 279 aaPredicted RBP5.34□□□□□ -1.55
SNX13-210ENST00000494402 VPREB3Q9UKI3 123 aa5.34□□□□□ -1.55
SNX13-210ENST00000494402 PAIP2BQ9ULR5 123 aaKnown RBP5.34□□□□□ -1.55
SNX13-210ENST00000494402 C14orf166Q9Y224 244 aaKnown RBP5.34□□□□□ -1.55
SNX13-210ENST00000494402 ORC6Q9Y5N6 252 aa5.34□□□□□ -1.55
SNX13-210ENST00000494402 NUP155O75694 1391 aa5.33□□□□□ -1.56
SNX13-210ENST00000494402 IGHV1OR15-1A0A075B7D0 117 aa5.33□□□□□ -1.56
SNX13-210ENST00000494402 IGHV4-30-2A0A087WSY4 118 aa5.33□□□□□ -1.56
SNX13-210ENST00000494402 OR11H12B2RN74 326 aa5.33□□□□□ -1.56
SNX13-210ENST00000494402 C15orf65H3BRN8 121 aa5.33□□□□□ -1.56
SNX13-210ENST00000494402 SOCS2O14508 198 aa5.33□□□□□ -1.56
SNX13-210ENST00000494402 RP2O75695 350 aa5.33□□□□□ -1.56
SNX13-210ENST00000494402 VENTXO95231 258 aa5.33□□□□□ -1.56
SNX13-210ENST00000494402 MOSP00540 346 aa5.33□□□□□ -1.56
SNX13-210ENST00000494402 IGKV1D-16P01601 117 aa5.33□□□□□ -1.56
SNX13-210ENST00000494402 CRABP1P29762 137 aa5.33□□□□□ -1.56
SNX13-210ENST00000494402 FMO3P31513 532 aa5.33□□□□□ -1.56
SNX13-210ENST00000494402 RCVRNP35243 200 aa5.33□□□□□ -1.56
SNX13-210ENST00000494402 PFN3P60673 137 aa5.33□□□□□ -1.56
SNX13-210ENST00000494402 FLI1Q01543 452 aaPredicted RBP5.33□□□□□ -1.56
SNX13-210ENST00000494402 ZNF763Q0D2J5 394 aa5.33□□□□□ -1.56
SNX13-210ENST00000494402 ARHGAP11BQ3KRB8 267 aa5.33□□□□□ -1.56
SNX13-210ENST00000494402 CLEC12AQ5QGZ9 265 aa5.33□□□□□ -1.56
SNX13-210ENST00000494402 C1orf100Q5SVJ3 147 aa5.33□□□□□ -1.56
SNX13-210ENST00000494402 C1orf146Q5VVC0 180 aa5.33□□□□□ -1.56
SNX13-210ENST00000494402 UNQ9370/PRO34162Q6UXP9 181 aa5.33□□□□□ -1.56
SNX13-210ENST00000494402 SPNS3Q6ZMD2 512 aa5.33□□□□□ -1.56
SNX13-210ENST00000494402 DPPA2Q7Z7J5 298 aa5.33□□□□□ -1.56
SNX13-210ENST00000494402 ARIH2OSQ8N7S6 290 aa5.33□□□□□ -1.56
Retrieved 100 of 20,778 RNA–protein pairs in 51.2 ms