RNA–Protein interactions for RNA: ENST00000494123.5

BRCA1-223, Transcript of BRCA1, DNA repair associated, humanhuman

TSL 1 (best)

Gene BRCA1, Length 1,612 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRCA1-223ENST00000494123 OR51I2Q9H344 312 aa12.29□□□□□ -0.44
BRCA1-223ENST00000494123 TCF7L1Q9HCS4 588 aa12.29□□□□□ -0.44
BRCA1-223ENST00000494123 NDUFS8O00217 210 aa12.29□□□□□ -0.44
BRCA1-223ENST00000494123 PPIHO43447 177 aaKnown RBP12.29□□□□□ -0.44
BRCA1-223ENST00000494123 RP2O75695 350 aa12.29□□□□□ -0.44
BRCA1-223ENST00000494123 SC5DO75845 299 aa12.29□□□□□ -0.44
BRCA1-223ENST00000494123 ARL6IP5O75915 188 aa12.29□□□□□ -0.44
BRCA1-223ENST00000494123 CD36P16671 472 aa12.29□□□□□ -0.44
BRCA1-223ENST00000494123 FSTP19883 344 aa12.29□□□□□ -0.44
BRCA1-223ENST00000494123 MTCP1P56278 107 aa12.29□□□□□ -0.44
BRCA1-223ENST00000494123 FAM76BQ5HYJ3 339 aa12.29□□□□□ -0.44
BRCA1-223ENST00000494123 HAGHLQ6PII5 290 aaPredicted RBP12.29□□□□□ -0.44
BRCA1-223ENST00000494123 TMEM91Q6ZNR0 172 aa12.29□□□□□ -0.44
BRCA1-223ENST00000494123 ZNF826PQ6ZT77 177 aa12.29□□□□□ -0.44
BRCA1-223ENST00000494123 TGIF2LYQ8IUE0 185 aa12.29□□□□□ -0.44
BRCA1-223ENST00000494123 OR51A2Q8NGJ7 313 aa12.29□□□□□ -0.44
BRCA1-223ENST00000494123 Q8TCH9 128 aa12.29□□□□□ -0.44
BRCA1-223ENST00000494123 PHYHIPQ92561 330 aa12.29□□□□□ -0.44
BRCA1-223ENST00000494123 TIMD4Q96H15 378 aa12.29□□□□□ -0.44
BRCA1-223ENST00000494123 SLITRK2Q9H156 845 aa12.29□□□□□ -0.44
BRCA1-223ENST00000494123 TLNRD1Q9H1K6 362 aa12.29□□□□□ -0.44
BRCA1-223ENST00000494123 EXOSC4Q9NPD3 245 aaKnown RBP12.29□□□□□ -0.44
BRCA1-223ENST00000494123 TMEM138Q9NPI0 162 aa12.29□□□□□ -0.44
BRCA1-223ENST00000494123 RNF7Q9UBF6 113 aa12.29□□□□□ -0.44
BRCA1-223ENST00000494123 STUB1Q9UNE7 303 aa12.29□□□□□ -0.44
BRCA1-223ENST00000494123 FOXJ3Q9UPW0 622 aa12.29□□□□□ -0.44
BRCA1-223ENST00000494123 TRAV8-7A0A075B6U6 113 aa12.28□□□□□ -0.44
BRCA1-223ENST00000494123 TRDV1A0A1B0GX56 115 aa12.28□□□□□ -0.44
BRCA1-223ENST00000494123 PIN1P1O15428 100 aa12.28□□□□□ -0.44
BRCA1-223ENST00000494123 GPX5O75715 221 aa12.28□□□□□ -0.44
BRCA1-223ENST00000494123 CYB5R3P00387 301 aaPredicted RBP12.28□□□□□ -0.44
BRCA1-223ENST00000494123 PLATP00750 562 aa12.28□□□□□ -0.44
BRCA1-223ENST00000494123 MAS1P04201 325 aa12.28□□□□□ -0.44
BRCA1-223ENST00000494123 IGFBP3P17936 291 aaPredicted RBP12.28□□□□□ -0.44
BRCA1-223ENST00000494123 BDKRB2P30411 391 aa12.28□□□□□ -0.44
BRCA1-223ENST00000494123 GPR6P46095 362 aaPredicted RBP12.28□□□□□ -0.44
BRCA1-223ENST00000494123 TMEM33P57088 247 aa12.28□□□□□ -0.44
BRCA1-223ENST00000494123 ZNF181Q2M3W8 571 aa12.28□□□□□ -0.44
BRCA1-223ENST00000494123 FAM27D1Q5T7N8 215 aa12.28□□□□□ -0.44
BRCA1-223ENST00000494123 ASPHD2Q6ICH7 369 aa12.28□□□□□ -0.44
BRCA1-223ENST00000494123 ZNF529Q6P280 563 aa12.28□□□□□ -0.44
BRCA1-223ENST00000494123 SATL1Q86VE3 508 aa12.28□□□□□ -0.44
BRCA1-223ENST00000494123 ANGPTL5Q86XS5 388 aa12.28□□□□□ -0.44
BRCA1-223ENST00000494123 BOLLQ8N9W6 283 aaKnown RBP12.28□□□□□ -0.44
BRCA1-223ENST00000494123 LRRC29Q8WV35 223 aa12.28□□□□□ -0.44
BRCA1-223ENST00000494123 SPACA5Q96QH8 159 aa12.28□□□□□ -0.44
BRCA1-223ENST00000494123 GPER1Q99527 375 aa12.28□□□□□ -0.44
BRCA1-223ENST00000494123 SSR3Q9UNL2 185 aa12.28□□□□□ -0.44
BRCA1-223ENST00000494123 IGKV1-27A0A075B6S5 117 aa12.27□□□□□ -0.44
BRCA1-223ENST00000494123 J3QT63 122 aa12.27□□□□□ -0.44
BRCA1-223ENST00000494123 UCHL1P09936 223 aa12.27□□□□□ -0.44
BRCA1-223ENST00000494123 GALP22466 123 aa12.27□□□□□ -0.44
BRCA1-223ENST00000494123 CALRP27797 417 aaKnown RBP12.27□□□□□ -0.44
BRCA1-223ENST00000494123 PMELP40967 661 aa12.27□□□□□ -0.44
BRCA1-223ENST00000494123 POU3F4P49335 361 aa12.27□□□□□ -0.44
BRCA1-223ENST00000494123 HNRNPA0Q13151 305 aaKnown RBP12.27□□□□□ -0.44
BRCA1-223ENST00000494123 DDI2Q5TDH0 399 aa12.27□□□□□ -0.44
BRCA1-223ENST00000494123 CD200R1LQ6Q8B3 271 aa12.27□□□□□ -0.44
BRCA1-223ENST00000494123 WDR82Q6UXN9 313 aa12.27□□□□□ -0.44
BRCA1-223ENST00000494123 CALHM1Q8IU99 346 aa12.27□□□□□ -0.44
BRCA1-223ENST00000494123 C11orf53Q8IXP5 236 aa12.27□□□□□ -0.44
BRCA1-223ENST00000494123 ZNF671Q8TAW3 534 aa12.27□□□□□ -0.44
BRCA1-223ENST00000494123 C10orf105Q8TEF2 133 aa12.27□□□□□ -0.44
BRCA1-223ENST00000494123 AQP3Q92482 292 aa12.27□□□□□ -0.44
BRCA1-223ENST00000494123 RAB1CQ92928 201 aa12.27□□□□□ -0.44
BRCA1-223ENST00000494123 RFT1Q96AA3 541 aa12.27□□□□□ -0.44
BRCA1-223ENST00000494123 Q96MF0 132 aa12.27□□□□□ -0.44
BRCA1-223ENST00000494123 DCAF16Q9NXF7 216 aa12.27□□□□□ -0.44
BRCA1-223ENST00000494123 SCOCQ9UIL1 159 aa12.27□□□□□ -0.44
BRCA1-223ENST00000494123 POLDIP2Q9Y2S7 368 aa12.27□□□□□ -0.44
BRCA1-223ENST00000494123 CSMD1Q96PZ7 3565 aa12.26□□□□□ -0.45
BRCA1-223ENST00000494123 TRIM64BA6NI03 449 aa12.26□□□□□ -0.45
BRCA1-223ENST00000494123 CYSRT1A8MQ03 144 aa12.26□□□□□ -0.45
BRCA1-223ENST00000494123 TMEM178BH3BS89 294 aa12.26□□□□□ -0.45
BRCA1-223ENST00000494123 CYB5AP00167 134 aa12.26□□□□□ -0.45
BRCA1-223ENST00000494123 SRMP19623 302 aa12.26□□□□□ -0.45
BRCA1-223ENST00000494123 GIFP27352 417 aa12.26□□□□□ -0.45
BRCA1-223ENST00000494123 RBMXP38159 391 aaKnown RBP12.26□□□□□ -0.45
BRCA1-223ENST00000494123 RIN1Q13671 783 aa12.26□□□□□ -0.45
BRCA1-223ENST00000494123 KISS1Q15726 138 aa12.26□□□□□ -0.45
BRCA1-223ENST00000494123 DNM1P46Q6ZS02 220 aa12.26□□□□□ -0.45
BRCA1-223ENST00000494123 OR52N4Q8NGI2 321 aa12.26□□□□□ -0.45
BRCA1-223ENST00000494123 OR10Z1Q8NGY1 313 aa12.26□□□□□ -0.45
BRCA1-223ENST00000494123 CHCHD6Q9BRQ6 235 aa12.26□□□□□ -0.45
BRCA1-223ENST00000494123 PKIBQ9C010 78 aa12.26□□□□□ -0.45
BRCA1-223ENST00000494123 GSTK1Q9Y2Q3 226 aa12.26□□□□□ -0.45
BRCA1-223ENST00000494123 NPTNQ9Y639 398 aa12.26□□□□□ -0.45
BRCA1-223ENST00000494123 IGHV4-30-2A0A087WSY4 118 aa12.26□□□□□ -0.45
BRCA1-223ENST00000494123 LOC100506127A0A0U1RQW1 187 aa12.26□□□□□ -0.45
BRCA1-223ENST00000494123 ISPDA4D126 451 aa12.26□□□□□ -0.45
BRCA1-223ENST00000494123 RHBDL1O75783 438 aa12.26□□□□□ -0.45
BRCA1-223ENST00000494123 ALDOBP05062 364 aa12.26□□□□□ -0.45
BRCA1-223ENST00000494123 SLC25A16P16260 332 aa12.26□□□□□ -0.45
BRCA1-223ENST00000494123 GADD45AP24522 165 aa12.26□□□□□ -0.45
BRCA1-223ENST00000494123 MYL9P24844 172 aa12.26□□□□□ -0.45
BRCA1-223ENST00000494123 ZNF93P35789 620 aaPredicted RBP12.26□□□□□ -0.45
BRCA1-223ENST00000494123 GMFBP60983 142 aa12.26□□□□□ -0.45
BRCA1-223ENST00000494123 TIMM50Q3ZCQ8 353 aa12.26□□□□□ -0.45
BRCA1-223ENST00000494123 AVPI1Q5T686 147 aa12.26□□□□□ -0.45
BRCA1-223ENST00000494123 C22orf42Q6IC83 251 aa12.26□□□□□ -0.45
Retrieved 100 of 20,778 RNA–protein pairs in 30.8 ms