RNA–Protein interactions for RNA: ENST00000493582.5

HDAC4-210, Transcript of histone deacetylase 4, humanhuman

TSL 1 (best)

Gene HDAC4, Length 3,188 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC4-210ENST00000493582 CDC14BO60729 498 aa10.31□□□□□ -0.76
HDAC4-210ENST00000493582 TTRP02766 147 aa10.31□□□□□ -0.76
HDAC4-210ENST00000493582 GPR89BP0CG08 455 aa10.31□□□□□ -0.76
HDAC4-210ENST00000493582 MYOGP15173 224 aa10.31□□□□□ -0.76
HDAC4-210ENST00000493582 VIPR2P41587 438 aa10.31□□□□□ -0.76
HDAC4-210ENST00000493582 SPSB3Q6PJ21 355 aa10.31□□□□□ -0.76
HDAC4-210ENST00000493582 P4HA3Q7Z4N8 544 aa10.31□□□□□ -0.76
HDAC4-210ENST00000493582 OR13D1Q8NGV5 346 aa10.31□□□□□ -0.76
HDAC4-210ENST00000493582 NIPSNAP3BQ9BS92 247 aa10.31□□□□□ -0.76
HDAC4-210ENST00000493582 TMEM59Q9BXS4 323 aa10.31□□□□□ -0.76
HDAC4-210ENST00000493582 APOBEC3CQ9NRW3 190 aaKnown RBP eCLIP10.31□□□□□ -0.76
HDAC4-210ENST00000493582 SRPK3Q9UPE1 567 aa10.31□□□□□ -0.76
HDAC4-210ENST00000493582 MMACHCQ9Y4U1 282 aa10.31□□□□□ -0.76
HDAC4-210ENST00000493582 HSFX4A0A1B0GTS1 333 aaPredicted RBP10.31□□□□□ -0.76
HDAC4-210ENST00000493582 HSFX3A0A1B0GWH4 333 aaPredicted RBP10.31□□□□□ -0.76
HDAC4-210ENST00000493582 AMBPP02760 352 aa10.31□□□□□ -0.76
HDAC4-210ENST00000493582 H2BFMP0C1H6 154 aa10.31□□□□□ -0.76
HDAC4-210ENST00000493582 JMJD7P0C870 316 aa10.31□□□□□ -0.76
HDAC4-210ENST00000493582 HLA-DOBP13765 273 aa10.31□□□□□ -0.76
HDAC4-210ENST00000493582 ZNF823P16415 610 aa10.31□□□□□ -0.76
HDAC4-210ENST00000493582 SLC10A1Q14973 349 aa10.31□□□□□ -0.76
HDAC4-210ENST00000493582 NKAIN1Q4KMZ8 207 aa10.31□□□□□ -0.76
HDAC4-210ENST00000493582 SULF2Q8IWU5 870 aa10.31□□□□□ -0.76
HDAC4-210ENST00000493582 ZNF519Q8TB69 540 aa10.31□□□□□ -0.76
HDAC4-210ENST00000493582 NOL4LQ96MY1 436 aaPredicted RBP10.31□□□□□ -0.76
HDAC4-210ENST00000493582 DEC1Q9P2X7 70 aa10.31□□□□□ -0.76
HDAC4-210ENST00000493582 SLC17A4Q9Y2C5 497 aa10.31□□□□□ -0.76
HDAC4-210ENST00000493582 A0A1B0GW64 132 aa10.3□□□□□ -0.76
HDAC4-210ENST00000493582 A0A1W2PP55 124 aa10.3□□□□□ -0.76
HDAC4-210ENST00000493582 FUT3P21217 361 aa10.3□□□□□ -0.76
HDAC4-210ENST00000493582 FOXK1P85037 733 aa10.3□□□□□ -0.76
HDAC4-210ENST00000493582 DEFB110Q30KQ9 67 aa10.3□□□□□ -0.76
HDAC4-210ENST00000493582 CHRFAM7AQ494W8 412 aa10.3□□□□□ -0.76
HDAC4-210ENST00000493582 ZNF440Q8IYI8 595 aa10.3□□□□□ -0.76
HDAC4-210ENST00000493582 BEND2Q8NDZ0 799 aa10.3□□□□□ -0.76
HDAC4-210ENST00000493582 OR5D18Q8NGL1 313 aa10.3□□□□□ -0.76
HDAC4-210ENST00000493582 OR2G3Q8NGZ4 309 aa10.3□□□□□ -0.76
HDAC4-210ENST00000493582 RHBDD1Q8TEB9 315 aa10.3□□□□□ -0.76
HDAC4-210ENST00000493582 SLC22A18Q96BI1 424 aa10.3□□□□□ -0.76
HDAC4-210ENST00000493582 C1orf147Q96MC9 270 aaPredicted RBP10.3□□□□□ -0.76
HDAC4-210ENST00000493582 OR10A5Q9H207 317 aa10.3□□□□□ -0.76
HDAC4-210ENST00000493582 ZNF701Q9NV72 531 aaPredicted RBP10.3□□□□□ -0.76
HDAC4-210ENST00000493582 HEBP2Q9Y5Z4 205 aa10.3□□□□□ -0.76
HDAC4-210ENST00000493582 WSB1Q9Y6I7 421 aa10.3□□□□□ -0.76
HDAC4-210ENST00000493582 ATG2BQ96BY7 2078 aa10.3□□□□□ -0.76
HDAC4-210ENST00000493582 SPEGQ15772 3267 aa10.3□□□□□ -0.76
HDAC4-210ENST00000493582 ZNF878C9JN71 531 aa10.3□□□□□ -0.76
HDAC4-210ENST00000493582 GPR137BO60478 399 aa10.3□□□□□ -0.76
HDAC4-210ENST00000493582 NUDT14O95848 222 aa10.3□□□□□ -0.76
HDAC4-210ENST00000493582 PGA3P0DJD8 388 aa10.3□□□□□ -0.76
HDAC4-210ENST00000493582 ZNF117Q03924 483 aa10.3□□□□□ -0.76
HDAC4-210ENST00000493582 TSPO2Q5TGU0 170 aa10.3□□□□□ -0.76
HDAC4-210ENST00000493582 LYZL2Q7Z4W2 148 aa10.3□□□□□ -0.76
HDAC4-210ENST00000493582 OR52M1Q8NGK5 317 aa10.3□□□□□ -0.76
HDAC4-210ENST00000493582 SCARF2Q96GP6 870 aaPredicted RBP10.3□□□□□ -0.76
HDAC4-210ENST00000493582 ZNF2Q9BSG1 426 aaPredicted RBP10.3□□□□□ -0.76
HDAC4-210ENST00000493582 GPR87Q9BY21 358 aa10.3□□□□□ -0.76
HDAC4-210ENST00000493582 MMP7P09237 267 aaPredicted RBP10.3□□□□□ -0.76
HDAC4-210ENST00000493582 FNDC7Q5VTL7 733 aa10.3□□□□□ -0.76
HDAC4-210ENST00000493582 ZNF880Q6PDB4 577 aa10.3□□□□□ -0.76
HDAC4-210ENST00000493582 COMMD2Q86X83 199 aa10.3□□□□□ -0.76
HDAC4-210ENST00000493582 PLPP5Q8NEB5 264 aa10.3□□□□□ -0.76
HDAC4-210ENST00000493582 SLC26A10Q8NG04 563 aa10.3□□□□□ -0.76
HDAC4-210ENST00000493582 OR51E1Q8TCB6 317 aa10.3□□□□□ -0.76
HDAC4-210ENST00000493582 DAZLQ92904 295 aaKnown RBP10.3□□□□□ -0.76
HDAC4-210ENST00000493582 CDCA3Q99618 268 aaPredicted RBP10.3□□□□□ -0.76
HDAC4-210ENST00000493582 SUSD2Q9UGT4 822 aa10.3□□□□□ -0.76
HDAC4-210ENST00000493582 IGKV1D-43A0A0B4J1Z2 117 aa10.29□□□□□ -0.76
HDAC4-210ENST00000493582 SCDO00767 359 aa10.29□□□□□ -0.76
HDAC4-210ENST00000493582 DVL1O14640 695 aa10.29□□□□□ -0.76
HDAC4-210ENST00000493582 TNFSF14O43557 240 aa10.29□□□□□ -0.76
HDAC4-210ENST00000493582 GPR3P46089 330 aa10.29□□□□□ -0.76
HDAC4-210ENST00000493582 SEC13P55735 322 aa10.29□□□□□ -0.76
HDAC4-210ENST00000493582 SGCGQ13326 291 aa10.29□□□□□ -0.76
HDAC4-210ENST00000493582 FZD2Q14332 565 aa10.29□□□□□ -0.76
HDAC4-210ENST00000493582 ICAM4Q14773 271 aa10.29□□□□□ -0.76
HDAC4-210ENST00000493582 PRR22Q8IZ63 422 aa10.29□□□□□ -0.76
HDAC4-210ENST00000493582 KCNG3Q8TAE7 436 aa10.29□□□□□ -0.76
HDAC4-210ENST00000493582 TXNIPQ9H3M7 391 aa10.29□□□□□ -0.76
HDAC4-210ENST00000493582 VSX1Q9NZR4 365 aaPredicted RBP10.29□□□□□ -0.76
HDAC4-210ENST00000493582 PITPNC1Q9UKF7 332 aa10.29□□□□□ -0.76
HDAC4-210ENST00000493582 A6NIZ1 184 aa10.29□□□□□ -0.76
HDAC4-210ENST00000493582 MARCH11A6NNE9 402 aa10.29□□□□□ -0.76
HDAC4-210ENST00000493582 SLC31A1O15431 190 aa10.29□□□□□ -0.76
HDAC4-210ENST00000493582 HCRTR2O43614 444 aa10.29□□□□□ -0.76
HDAC4-210ENST00000493582 GUSBP08236 651 aa10.29□□□□□ -0.76
HDAC4-210ENST00000493582 OMGP23515 440 aa10.29□□□□□ -0.76
HDAC4-210ENST00000493582 RAP1BP61224 184 aa10.29□□□□□ -0.76
HDAC4-210ENST00000493582 KIR2DS3Q14952 304 aa10.29□□□□□ -0.76
HDAC4-210ENST00000493582 TANGO2Q6ICL3 276 aa10.29□□□□□ -0.76
HDAC4-210ENST00000493582 OR2M4Q96R27 311 aa10.29□□□□□ -0.76
HDAC4-210ENST00000493582 CCNL2Q96S94 520 aaPredicted RBP10.29□□□□□ -0.76
HDAC4-210ENST00000493582 GPER1Q99527 375 aa10.29□□□□□ -0.76
HDAC4-210ENST00000493582 NUDT16L1Q9BRJ7 211 aaKnown RBP10.29□□□□□ -0.76
HDAC4-210ENST00000493582 PBOV1Q9GZY1 135 aa10.29□□□□□ -0.76
HDAC4-210ENST00000493582 SMDT1Q9H4I9 107 aa10.29□□□□□ -0.76
HDAC4-210ENST00000493582 CBLN4Q9NTU7 201 aa10.29□□□□□ -0.76
HDAC4-210ENST00000493582 AK3Q9UIJ7 227 aa10.29□□□□□ -0.76
HDAC4-210ENST00000493582 HSF4Q9ULV5 492 aa10.29□□□□□ -0.76
HDAC4-210ENST00000493582 CBY1Q9Y3M2 126 aa10.29□□□□□ -0.76
Retrieved 100 of 20,778 RNA–protein pairs in 41.1 ms