RNA–Protein interactions for RNA: ENST00000493468.6

PRPF40A-211, Transcript of pre-mRNA processing factor 40 homolog A, humanhuman

TSL 1 (best)

Gene PRPF40A, Length 1,043 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRPF40A-211ENST00000493468 FMO3P31513 532 aa11.38□□□□□ -0.59
PRPF40A-211ENST00000493468 DLX6P56179 175 aa11.38□□□□□ -0.59
PRPF40A-211ENST00000493468 OR12D2P58182 307 aa11.38□□□□□ -0.59
PRPF40A-211ENST00000493468 ZNF121P58317 390 aaPredicted RBP11.38□□□□□ -0.59
PRPF40A-211ENST00000493468 DGCR2P98153 550 aa11.38□□□□□ -0.59
PRPF40A-211ENST00000493468 KLF10Q13118 480 aa11.38□□□□□ -0.59
PRPF40A-211ENST00000493468 ZNF273Q14593 569 aa11.38□□□□□ -0.59
PRPF40A-211ENST00000493468 SLC35F1Q5T1Q4 408 aa11.38□□□□□ -0.59
PRPF40A-211ENST00000493468 ZNF770Q6IQ21 691 aaPredicted RBP11.38□□□□□ -0.59
PRPF40A-211ENST00000493468 UNQ9370/PRO34162Q6UXP9 181 aa11.38□□□□□ -0.59
PRPF40A-211ENST00000493468 FAM57BQ71RH2 274 aa11.38□□□□□ -0.59
PRPF40A-211ENST00000493468 KRT74Q7RTS7 529 aa11.38□□□□□ -0.59
PRPF40A-211ENST00000493468 PIGWQ7Z7B1 504 aa11.38□□□□□ -0.59
PRPF40A-211ENST00000493468 ZDHHC23Q8IYP9 409 aa11.38□□□□□ -0.59
PRPF40A-211ENST00000493468 FAM86B1Q8N7N1 296 aa11.38□□□□□ -0.59
PRPF40A-211ENST00000493468 AKR1E2Q96JD6 320 aa11.38□□□□□ -0.59
PRPF40A-211ENST00000493468 C7orf34Q96L11 122 aa11.38□□□□□ -0.59
PRPF40A-211ENST00000493468 OR51I2Q9H344 312 aa11.38□□□□□ -0.59
PRPF40A-211ENST00000493468 YY1AP1Q9H869 796 aa11.38□□□□□ -0.59
PRPF40A-211ENST00000493468 ZNF319Q9P2F9 582 aa11.38□□□□□ -0.59
PRPF40A-211ENST00000493468 GMPR2Q9P2T1 348 aaKnown RBP11.38□□□□□ -0.59
PRPF40A-211ENST00000493468 LSM4Q9Y4Z0 139 aaKnown RBP11.38□□□□□ -0.59
PRPF40A-211ENST00000493468 LCE6AA0A183 80 aa11.37□□□□□ -0.59
PRPF40A-211ENST00000493468 SLC1A7O00341 560 aa11.37□□□□□ -0.59
PRPF40A-211ENST00000493468 ZNF593O00488 134 aaPredicted RBP11.37□□□□□ -0.59
PRPF40A-211ENST00000493468 GSTA4O15217 222 aa11.37□□□□□ -0.59
PRPF40A-211ENST00000493468 RAMP3O60896 148 aa11.37□□□□□ -0.59
PRPF40A-211ENST00000493468 SLC6A1P30531 599 aa11.37□□□□□ -0.59
PRPF40A-211ENST00000493468 GSSP48637 474 aa11.37□□□□□ -0.59
PRPF40A-211ENST00000493468 GNG3P63215 75 aa11.37□□□□□ -0.59
PRPF40A-211ENST00000493468 LIPEQ05469 1076 aa11.37□□□□□ -0.59
PRPF40A-211ENST00000493468 GFOD2Q3B7J2 385 aa11.37□□□□□ -0.59
PRPF40A-211ENST00000493468 SMIM21Q3B7S5 101 aa11.37□□□□□ -0.59
PRPF40A-211ENST00000493468 KHDC1LQ5JSQ8 128 aa11.37□□□□□ -0.59
PRPF40A-211ENST00000493468 MINOS1Q5TGZ0 78 aa11.37□□□□□ -0.59
PRPF40A-211ENST00000493468 LCN8Q6JVE9 175 aa11.37□□□□□ -0.59
PRPF40A-211ENST00000493468 SLC15A3Q8IY34 581 aa11.37□□□□□ -0.59
PRPF40A-211ENST00000493468 CD177Q8N6Q3 437 aa11.37□□□□□ -0.59
PRPF40A-211ENST00000493468 OR51L1Q8NGJ5 315 aa11.37□□□□□ -0.59
PRPF40A-211ENST00000493468 OR2T27Q8NH04 317 aa11.37□□□□□ -0.59
PRPF40A-211ENST00000493468 OR52J3Q8NH60 311 aa11.37□□□□□ -0.59
PRPF40A-211ENST00000493468 ZNF671Q8TAW3 534 aa11.37□□□□□ -0.59
PRPF40A-211ENST00000493468 RNF133Q8WVZ7 376 aa11.37□□□□□ -0.59
PRPF40A-211ENST00000493468 LIN7BQ9HAP6 207 aa11.37□□□□□ -0.59
PRPF40A-211ENST00000493468 MINOS1-NBL1R4GNA1 71 aa11.37□□□□□ -0.59
PRPF40A-211ENST00000493468 EDF1O60869 148 aaKnown RBP11.36□□□□□ -0.59
PRPF40A-211ENST00000493468 THBS3P49746 956 aa11.36□□□□□ -0.59
PRPF40A-211ENST00000493468 GPM6AP51674 278 aa11.36□□□□□ -0.59
PRPF40A-211ENST00000493468 BLVRAP53004 296 aa11.36□□□□□ -0.59
PRPF40A-211ENST00000493468 SMIM11AP58511 58 aa11.36□□□□□ -0.59
PRPF40A-211ENST00000493468 EIF2B1Q14232 305 aaKnown RBP11.36□□□□□ -0.59
PRPF40A-211ENST00000493468 KRT72Q14CN4 511 aa11.36□□□□□ -0.59
PRPF40A-211ENST00000493468 RPL13AP3Q6NVV1 102 aa11.36□□□□□ -0.59
PRPF40A-211ENST00000493468 ACP7Q6ZNF0 438 aa11.36□□□□□ -0.59
PRPF40A-211ENST00000493468 TIGD4Q8IY51 512 aa11.36□□□□□ -0.59
PRPF40A-211ENST00000493468 OR4M1Q8NGD0 313 aa11.36□□□□□ -0.59
PRPF40A-211ENST00000493468 AQP3Q92482 292 aa11.36□□□□□ -0.59
PRPF40A-211ENST00000493468 PIGCQ92535 297 aa11.36□□□□□ -0.59
PRPF40A-211ENST00000493468 FAM162AQ96A26 154 aa11.36□□□□□ -0.59
PRPF40A-211ENST00000493468 PGAM5Q96HS1 289 aa11.36□□□□□ -0.59
PRPF40A-211ENST00000493468 HIST1H2AAQ96QV6 131 aa11.36□□□□□ -0.59
PRPF40A-211ENST00000493468 C1orf21Q9H246 121 aa11.36□□□□□ -0.59
PRPF40A-211ENST00000493468 RFPL4AA6NLU0 287 aa11.35□□□□□ -0.59
PRPF40A-211ENST00000493468 RFPL4AL1F8VTS6 287 aa11.35□□□□□ -0.59
PRPF40A-211ENST00000493468 CCDC159P0C7I6 412 aa11.35□□□□□ -0.59
PRPF40A-211ENST00000493468 PGA5P0DJD9 388 aa11.35□□□□□ -0.59
PRPF40A-211ENST00000493468 IGHV1-8P0DP01 117 aa11.35□□□□□ -0.59
PRPF40A-211ENST00000493468 IFNGR2P38484 337 aa11.35□□□□□ -0.59
PRPF40A-211ENST00000493468 OPRL1P41146 370 aa11.35□□□□□ -0.59
PRPF40A-211ENST00000493468 TSPAN31Q12999 210 aa11.35□□□□□ -0.59
PRPF40A-211ENST00000493468 ZNF511Q8NB15 262 aa11.35□□□□□ -0.59
PRPF40A-211ENST00000493468 POC1AQ8NBT0 407 aa11.35□□□□□ -0.59
PRPF40A-211ENST00000493468 SLC37A3Q8NCC5 494 aa11.35□□□□□ -0.59
PRPF40A-211ENST00000493468 OR52L1Q8NGH7 329 aa11.35□□□□□ -0.59
PRPF40A-211ENST00000493468 ITFG2Q969R8 447 aa11.35□□□□□ -0.59
PRPF40A-211ENST00000493468 NMNAT2Q9BZQ4 307 aa11.35□□□□□ -0.59
PRPF40A-211ENST00000493468 SAR1AQ9NR31 198 aa11.35□□□□□ -0.59
PRPF40A-211ENST00000493468 INTS9Q9NV88 658 aaKnown RBP11.35□□□□□ -0.59
PRPF40A-211ENST00000493468 DNAJC27Q9NZQ0 273 aa11.35□□□□□ -0.59
PRPF40A-211ENST00000493468 CDH10Q9Y6N8 788 aa11.35□□□□□ -0.59
PRPF40A-211ENST00000493468 OR5B21A6NL26 309 aa11.34□□□□□ -0.59
PRPF40A-211ENST00000493468 ZNF732B4DXR9 585 aa11.34□□□□□ -0.59
PRPF40A-211ENST00000493468 NME4O00746 187 aa11.34□□□□□ -0.59
PRPF40A-211ENST00000493468 DIRAS1O95057 198 aa11.34□□□□□ -0.59
PRPF40A-211ENST00000493468 GADD45GO95257 159 aa11.34□□□□□ -0.59
PRPF40A-211ENST00000493468 TK1P04183 234 aa11.34□□□□□ -0.59
PRPF40A-211ENST00000493468 ZNF728P0DKX0 622 aa11.34□□□□□ -0.59
PRPF40A-211ENST00000493468 PRDX2P32119 198 aa11.34□□□□□ -0.59
PRPF40A-211ENST00000493468 GP2P55259 537 aaKnown RBP11.34□□□□□ -0.59
PRPF40A-211ENST00000493468 SLC34A1Q06495 639 aa11.34□□□□□ -0.59
PRPF40A-211ENST00000493468 IL18R1Q13478 541 aa11.34□□□□□ -0.59
PRPF40A-211ENST00000493468 CEACAM21Q3KPI0 293 aa11.34□□□□□ -0.59
PRPF40A-211ENST00000493468 C10orf99Q6UWK7 81 aa11.34□□□□□ -0.59
PRPF40A-211ENST00000493468 OSR2Q8N2R0 312 aa11.34□□□□□ -0.59
PRPF40A-211ENST00000493468 Q8NFD4 153 aa11.34□□□□□ -0.59
PRPF40A-211ENST00000493468 RCN3Q96D15 328 aa11.34□□□□□ -0.59
PRPF40A-211ENST00000493468 ZNF649Q9BS31 505 aa11.34□□□□□ -0.59
PRPF40A-211ENST00000493468 ABHD6Q9BV23 337 aa11.34□□□□□ -0.59
PRPF40A-211ENST00000493468 VIPAS39Q9H9C1 493 aa11.34□□□□□ -0.59
PRPF40A-211ENST00000493468 HILPDAQ9Y5L2 63 aa11.34□□□□□ -0.59
Retrieved 100 of 20,778 RNA–protein pairs in 27.6 ms