RNA–Protein interactions for RNA: ENST00000492407.1

HDAC3-212, Transcript of histone deacetylase 3, humanhuman

TSL 5

Gene HDAC3, Length 782 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC3-212ENST00000492407 RELBQ01201 579 aa7.55□□□□□ -1.2
HDAC3-212ENST00000492407 SPIBQ01892 262 aa7.55□□□□□ -1.2
HDAC3-212ENST00000492407 ZNF92Q03936 586 aa7.55□□□□□ -1.2
HDAC3-212ENST00000492407 SF3A3Q12874 501 aaKnown RBP eCLIP7.55□□□□□ -1.2
HDAC3-212ENST00000492407 OR8B8Q15620 311 aa7.55□□□□□ -1.2
HDAC3-212ENST00000492407 SAMD4BQ5PRF9 694 aaKnown RBP7.55□□□□□ -1.2
HDAC3-212ENST00000492407 ATPAF1Q5TC12 328 aaPredicted RBP7.55□□□□□ -1.2
HDAC3-212ENST00000492407 ZSCAN2Q7Z7L9 614 aaPredicted RBP7.55□□□□□ -1.2
HDAC3-212ENST00000492407 GCSAMQ8N6F7 178 aa7.55□□□□□ -1.2
HDAC3-212ENST00000492407 KIR3DL3Q8N743 410 aa7.55□□□□□ -1.2
HDAC3-212ENST00000492407 FAM86B1Q8N7N1 296 aa7.55□□□□□ -1.2
HDAC3-212ENST00000492407 LY6G5BQ8NDX9 201 aa7.55□□□□□ -1.2
HDAC3-212ENST00000492407 PROKR2Q8NFJ6 384 aa7.55□□□□□ -1.2
HDAC3-212ENST00000492407 PYDC1Q8WXC3 89 aa7.55□□□□□ -1.2
HDAC3-212ENST00000492407 DNTTIP1Q9H147 329 aa7.55□□□□□ -1.2
HDAC3-212ENST00000492407 C16orf95Q9H693 158 aa7.55□□□□□ -1.2
HDAC3-212ENST00000492407 ABCB9Q9NP78 766 aa7.55□□□□□ -1.2
HDAC3-212ENST00000492407 ADA2Q9NZK5 511 aa7.55□□□□□ -1.2
HDAC3-212ENST00000492407 ANKRD30BLA7E2S9 258 aa7.54□□□□□ -1.2
HDAC3-212ENST00000492407 ZNF878C9JN71 531 aa7.54□□□□□ -1.2
HDAC3-212ENST00000492407 C3orf80F5H4A9 247 aa7.54□□□□□ -1.2
HDAC3-212ENST00000492407 DVL1O14640 695 aa7.54□□□□□ -1.2
HDAC3-212ENST00000492407 DIRAS1O95057 198 aa7.54□□□□□ -1.2
HDAC3-212ENST00000492407 SFTPBP07988 381 aa7.54□□□□□ -1.2
HDAC3-212ENST00000492407 CPEP16870 476 aa7.54□□□□□ -1.2
HDAC3-212ENST00000492407 OMGP23515 440 aa7.54□□□□□ -1.2
HDAC3-212ENST00000492407 KIR3DL2P43630 455 aa7.54□□□□□ -1.2
HDAC3-212ENST00000492407 ENTPD1P49961 510 aa7.54□□□□□ -1.2
HDAC3-212ENST00000492407 GUCA2AQ02747 115 aa7.54□□□□□ -1.2
HDAC3-212ENST00000492407 TRIM25Q14258 630 aaKnown RBP7.54□□□□□ -1.2
HDAC3-212ENST00000492407 TAF13Q15543 124 aa7.54□□□□□ -1.2
HDAC3-212ENST00000492407 MICBQ29980 383 aa7.54□□□□□ -1.2
HDAC3-212ENST00000492407 SNAI3Q3KNW1 292 aa7.54□□□□□ -1.2
HDAC3-212ENST00000492407 MIDNQ504T8 468 aa7.54□□□□□ -1.2
HDAC3-212ENST00000492407 GLYATL3Q5SZD4 288 aa7.54□□□□□ -1.2
HDAC3-212ENST00000492407 PGBD2Q6P3X8 592 aa7.54□□□□□ -1.2
HDAC3-212ENST00000492407 BRICD5Q6PL45 260 aa7.54□□□□□ -1.2
HDAC3-212ENST00000492407 RASSF6Q6ZTQ3 369 aa7.54□□□□□ -1.2
HDAC3-212ENST00000492407 SLC36A1Q7Z2H8 476 aa7.54□□□□□ -1.2
HDAC3-212ENST00000492407 DCXRQ7Z4W1 244 aa7.54□□□□□ -1.2
HDAC3-212ENST00000492407 FAM90A1Q86YD7 464 aa7.54□□□□□ -1.2
HDAC3-212ENST00000492407 ZDHHC21Q8IVQ6 265 aa7.54□□□□□ -1.2
HDAC3-212ENST00000492407 CMTM4Q8IZR5 234 aa7.54□□□□□ -1.2
HDAC3-212ENST00000492407 LNX2Q8N448 690 aa7.54□□□□□ -1.2
HDAC3-212ENST00000492407 FTMTQ8N4E7 242 aa7.54□□□□□ -1.2
HDAC3-212ENST00000492407 ZSCAN4Q8NAM6 433 aaPredicted RBP7.54□□□□□ -1.2
HDAC3-212ENST00000492407 CYB561A3Q8NBI2 242 aa7.54□□□□□ -1.2
HDAC3-212ENST00000492407 CSNK2A3Q8NEV1 391 aa7.54□□□□□ -1.2
HDAC3-212ENST00000492407 SDR9C7Q8NEX9 313 aa7.54□□□□□ -1.2
HDAC3-212ENST00000492407 OR5T1Q8NG75 326 aa7.54□□□□□ -1.2
HDAC3-212ENST00000492407 OR52H1Q8NGJ2 320 aa7.54□□□□□ -1.2
HDAC3-212ENST00000492407 LINC01006Q8NI28 216 aa7.54□□□□□ -1.2
HDAC3-212ENST00000492407 TNFRSF14Q92956 283 aa7.54□□□□□ -1.2
HDAC3-212ENST00000492407 BORCS5Q969J3 196 aa7.54□□□□□ -1.2
HDAC3-212ENST00000492407 SLAMF6Q96DU3 332 aa7.54□□□□□ -1.2
HDAC3-212ENST00000492407 COPS4Q9BT78 406 aa7.54□□□□□ -1.2
HDAC3-212ENST00000492407 NMNAT2Q9BZQ4 307 aa7.54□□□□□ -1.2
HDAC3-212ENST00000492407 TLNRD1Q9H1K6 362 aa7.54□□□□□ -1.2
HDAC3-212ENST00000492407 RGCCQ9H4X1 137 aa7.54□□□□□ -1.2
HDAC3-212ENST00000492407 NDE1Q9NXR1 346 aa7.54□□□□□ -1.2
HDAC3-212ENST00000492407 PDP1Q9P0J1 537 aaPredicted RBP7.54□□□□□ -1.2
HDAC3-212ENST00000492407 RPUSD1Q9UJJ7 312 aaKnown RBP7.54□□□□□ -1.2
HDAC3-212ENST00000492407 PRPF19Q9UMS4 504 aaKnown RBP7.54□□□□□ -1.2
HDAC3-212ENST00000492407 RNF114Q9Y508 228 aa7.54□□□□□ -1.2
HDAC3-212ENST00000492407 VWFP04275 2813 aa7.53□□□□□ -1.2
HDAC3-212ENST00000492407 ZNF593O00488 134 aaPredicted RBP7.53□□□□□ -1.2
HDAC3-212ENST00000492407 GPR137BO60478 399 aa7.53□□□□□ -1.2
HDAC3-212ENST00000492407 RPP14O95059 124 aaKnown RBP7.53□□□□□ -1.2
HDAC3-212ENST00000492407 APOL3O95236 402 aa7.53□□□□□ -1.2
HDAC3-212ENST00000492407 RAB3DO95716 219 aa7.53□□□□□ -1.2
HDAC3-212ENST00000492407 GRPP07492 148 aa7.53□□□□□ -1.2
HDAC3-212ENST00000492407 FBP1P09467 338 aa7.53□□□□□ -1.2
HDAC3-212ENST00000492407 STAG3L3P0CL85 134 aa7.53□□□□□ -1.2
HDAC3-212ENST00000492407 TGM4P49221 684 aa7.53□□□□□ -1.2
HDAC3-212ENST00000492407 PRSS12P56730 875 aa7.53□□□□□ -1.2
HDAC3-212ENST00000492407 PROK1P58294 105 aa7.53□□□□□ -1.2
HDAC3-212ENST00000492407 ARF6P62330 175 aa7.53□□□□□ -1.2
HDAC3-212ENST00000492407 GK3PQ14409 553 aa7.53□□□□□ -1.2
HDAC3-212ENST00000492407 TAF9Q16594 264 aa7.53□□□□□ -1.2
HDAC3-212ENST00000492407 LBHQ53QV2 105 aaPredicted RBP7.53□□□□□ -1.2
HDAC3-212ENST00000492407 SLC35F1Q5T1Q4 408 aa7.53□□□□□ -1.2
HDAC3-212ENST00000492407 RUSC1-AS1Q66K80 236 aa7.53□□□□□ -1.2
HDAC3-212ENST00000492407 SFRP4Q6FHJ7 346 aaPredicted RBP7.53□□□□□ -1.2
HDAC3-212ENST00000492407 ELP2Q6IA86 826 aa7.53□□□□□ -1.2
HDAC3-212ENST00000492407 ASPHD2Q6ICH7 369 aa7.53□□□□□ -1.2
HDAC3-212ENST00000492407 ZNF770Q6IQ21 691 aaPredicted RBP7.53□□□□□ -1.2
HDAC3-212ENST00000492407 PYHIN1Q6K0P9 492 aa7.53□□□□□ -1.2
HDAC3-212ENST00000492407 C11orf53Q8IXP5 236 aa7.53□□□□□ -1.2
HDAC3-212ENST00000492407 ENTHD1Q8IYW4 607 aa7.53□□□□□ -1.2
HDAC3-212ENST00000492407 PGAM4Q8N0Y7 254 aa7.53□□□□□ -1.2
HDAC3-212ENST00000492407 GALNT4Q8N4A0 578 aa7.53□□□□□ -1.2
HDAC3-212ENST00000492407 DTX3Q8N9I9 347 aa7.53□□□□□ -1.2
HDAC3-212ENST00000492407 SCCPDHQ8NBX0 429 aa7.53□□□□□ -1.2
HDAC3-212ENST00000492407 SLC37A3Q8NCC5 494 aa7.53□□□□□ -1.2
HDAC3-212ENST00000492407 SETD9Q8NE22 299 aa7.53□□□□□ -1.2
HDAC3-212ENST00000492407 C19orf18Q8NEA5 215 aa7.53□□□□□ -1.2
HDAC3-212ENST00000492407 OR1M1Q8NGA1 313 aa7.53□□□□□ -1.2
HDAC3-212ENST00000492407 OR13C3Q8NGS6 347 aa7.53□□□□□ -1.2
HDAC3-212ENST00000492407 OR8S1Q8NH09 359 aa7.53□□□□□ -1.2
HDAC3-212ENST00000492407 OR5R1Q8NH85 324 aa7.53□□□□□ -1.2
Retrieved 100 of 20,778 RNA–protein pairs in 32.6 ms