RNA–Protein interactions for RNA: ENST00000490730.1

SYNE4-205, Transcript of spectrin repeat containing nuclear envelope family member 4, humanhuman

TSL 2

Gene SYNE4, Length 1,175 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYNE4-205ENST00000490730 BLMHQ13867 455 aa17.19■□□□□ 0.34
SYNE4-205ENST00000490730 HAGHLQ6PII5 290 aaPredicted RBP17.19■□□□□ 0.34
SYNE4-205ENST00000490730 TRPM8Q7Z2W7 1104 aa17.19■□□□□ 0.34
SYNE4-205ENST00000490730 FAM185AQ8N0U4 392 aa17.19■□□□□ 0.34
SYNE4-205ENST00000490730 ZNRF1Q8ND25 227 aa17.19■□□□□ 0.34
SYNE4-205ENST00000490730 DUS3LQ96G46 650 aaKnown RBP17.19■□□□□ 0.34
SYNE4-205ENST00000490730 TEAD3Q99594 435 aa17.19■□□□□ 0.34
SYNE4-205ENST00000490730 VPREB3Q9UKI3 123 aa17.19■□□□□ 0.34
SYNE4-205ENST00000490730 PIGLQ9Y2B2 252 aa17.19■□□□□ 0.34
SYNE4-205ENST00000490730 IGKV1D-17A0A075B6S4 117 aa17.18■□□□□ 0.34
SYNE4-205ENST00000490730 CCDC182A6NF36 153 aa17.18■□□□□ 0.34
SYNE4-205ENST00000490730 ACOD1A6NK06 481 aa17.18■□□□□ 0.34
SYNE4-205ENST00000490730 PRR32B1ATL7 298 aa17.18■□□□□ 0.34
SYNE4-205ENST00000490730 TIMM23O14925 209 aa17.18■□□□□ 0.34
SYNE4-205ENST00000490730 PSG2P11465 335 aa17.18■□□□□ 0.34
SYNE4-205ENST00000490730 RIDAP52758 137 aaKnown RBP17.18■□□□□ 0.34
SYNE4-205ENST00000490730 CAV3P56539 151 aa17.18■□□□□ 0.34
SYNE4-205ENST00000490730 ZNF829Q3KNS6 432 aaPredicted RBP17.18■□□□□ 0.34
SYNE4-205ENST00000490730 NCR3LG1Q68D85 454 aa17.18■□□□□ 0.34
SYNE4-205ENST00000490730 DEGS2Q6QHC5 323 aa17.18■□□□□ 0.34
SYNE4-205ENST00000490730 Q6ZSV7 163 aa17.18■□□□□ 0.34
SYNE4-205ENST00000490730 ZNF671Q8TAW3 534 aa17.18■□□□□ 0.34
SYNE4-205ENST00000490730 UBE2FQ969M7 185 aa17.18■□□□□ 0.34
SYNE4-205ENST00000490730 CNN2Q99439 309 aaKnown RBP17.18■□□□□ 0.34
SYNE4-205ENST00000490730 METTL8Q9H825 291 aaKnown RBP17.18■□□□□ 0.34
SYNE4-205ENST00000490730 COPS3Q9UNS2 423 aa17.18■□□□□ 0.34
SYNE4-205ENST00000490730 TMEM14AQ9Y6G1 99 aa17.18■□□□□ 0.34
SYNE4-205ENST00000490730 H0YAE9 185 aa17.17■□□□□ 0.34
SYNE4-205ENST00000490730 M0R1W7 72 aa17.17■□□□□ 0.34
SYNE4-205ENST00000490730 TGP01266 2768 aa17.17■□□□□ 0.34
SYNE4-205ENST00000490730 UBE2E1P51965 193 aa17.17■□□□□ 0.34
SYNE4-205ENST00000490730 MFGE8Q08431 387 aaPredicted RBP17.17■□□□□ 0.34
SYNE4-205ENST00000490730 ZNF679Q8IYX0 411 aa17.17■□□□□ 0.34
SYNE4-205ENST00000490730 ZSCAN4Q8NAM6 433 aaPredicted RBP17.17■□□□□ 0.34
SYNE4-205ENST00000490730 OR5A2Q8NGI9 324 aa17.17■□□□□ 0.34
SYNE4-205ENST00000490730 ASB17Q8WXJ9 295 aa17.17■□□□□ 0.34
SYNE4-205ENST00000490730 DNAJC9Q8WXX5 260 aa17.17■□□□□ 0.34
SYNE4-205ENST00000490730 AQP3Q92482 292 aa17.17■□□□□ 0.34
SYNE4-205ENST00000490730 TNFRSF14Q92956 283 aa17.17■□□□□ 0.34
SYNE4-205ENST00000490730 PPP1R14AQ96A00 147 aa17.17■□□□□ 0.34
SYNE4-205ENST00000490730 OR8B4Q96RC9 309 aa17.17■□□□□ 0.34
SYNE4-205ENST00000490730 TCF7L1Q9HCS4 588 aa17.17■□□□□ 0.34
SYNE4-205ENST00000490730 ENPP5Q9UJA9 477 aa17.17■□□□□ 0.34
SYNE4-205ENST00000490730 NOTCH1P46531 2555 aa17.16■□□□□ 0.34
SYNE4-205ENST00000490730 TCRBV3S1A0A5B6 114 aa17.16■□□□□ 0.34
SYNE4-205ENST00000490730 ANKRD61A6NGH8 418 aa17.16■□□□□ 0.34
SYNE4-205ENST00000490730 OR5B21A6NL26 309 aa17.16■□□□□ 0.34
SYNE4-205ENST00000490730 M0R129 80 aa17.16■□□□□ 0.34
SYNE4-205ENST00000490730 ANGPTL7O43827 346 aa17.16■□□□□ 0.34
SYNE4-205ENST00000490730 PRKYO43930 277 aa17.16■□□□□ 0.34
SYNE4-205ENST00000490730 ZNF254O75437 659 aa17.16■□□□□ 0.34
SYNE4-205ENST00000490730 ATP6V1B1P15313 513 aa17.16■□□□□ 0.34
SYNE4-205ENST00000490730 PROK1P58294 105 aa17.16■□□□□ 0.34
SYNE4-205ENST00000490730 ESRRGP62508 458 aa17.16■□□□□ 0.34
SYNE4-205ENST00000490730 ROM1Q03395 351 aa17.16■□□□□ 0.34
SYNE4-205ENST00000490730 PDLIM3Q53GG5 364 aaPredicted RBP17.16■□□□□ 0.34
SYNE4-205ENST00000490730 ZNF684Q5T5D7 378 aa17.16■□□□□ 0.34
SYNE4-205ENST00000490730 C1orf122Q6ZSJ8 110 aa17.16■□□□□ 0.34
SYNE4-205ENST00000490730 ZNF488Q96MN9 340 aa17.16■□□□□ 0.34
SYNE4-205ENST00000490730 RBM4BQ9BQ04 359 aaKnown RBP17.16■□□□□ 0.34
SYNE4-205ENST00000490730 PRRG3Q9BZD7 231 aa17.16■□□□□ 0.34
SYNE4-205ENST00000490730 MMP27Q9H306 513 aa17.16■□□□□ 0.34
SYNE4-205ENST00000490730 NUFIP1Q9UHK0 495 aaKnown RBP17.16■□□□□ 0.34
SYNE4-205ENST00000490730 ZNF222Q9UK12 451 aa17.16■□□□□ 0.34
SYNE4-205ENST00000490730 POMPQ9Y244 141 aa17.16■□□□□ 0.34
SYNE4-205ENST00000490730 MAB21L2Q9Y586 359 aa17.16■□□□□ 0.34
SYNE4-205ENST00000490730 WNK1Q9H4A3 2382 aa17.16■□□□□ 0.34
SYNE4-205ENST00000490730 CLPXO76031 633 aa17.15■□□□□ 0.34
SYNE4-205ENST00000490730 NRASP01111 189 aa17.15■□□□□ 0.34
SYNE4-205ENST00000490730 DAPP51397 102 aa17.15■□□□□ 0.34
SYNE4-205ENST00000490730 PTGES3Q15185 160 aaKnown RBP17.15■□□□□ 0.34
SYNE4-205ENST00000490730 SMIM21Q3B7S5 101 aa17.15■□□□□ 0.34
SYNE4-205ENST00000490730 ASPHD2Q6ICH7 369 aa17.15■□□□□ 0.34
SYNE4-205ENST00000490730 BCDIN3DQ7Z5W3 292 aaKnown RBP17.15■□□□□ 0.34
SYNE4-205ENST00000490730 OR5R1Q8NH85 324 aa17.15■□□□□ 0.34
SYNE4-205ENST00000490730 PPA2Q9H2U2 334 aa17.15■□□□□ 0.34
SYNE4-205ENST00000490730 TRBV23-1A0A0A0MS06 115 aa17.14■□□□□ 0.33
SYNE4-205ENST00000490730 LOC110117498-PIK3R3F6TDL0 507 aa17.14■□□□□ 0.33
SYNE4-205ENST00000490730 MTRF1O75570 445 aaKnown RBP17.14■□□□□ 0.33
SYNE4-205ENST00000490730 DHRS3O75911 302 aa17.14■□□□□ 0.33
SYNE4-205ENST00000490730 DNAJC8O75937 253 aaPredicted RBP17.14■□□□□ 0.33
SYNE4-205ENST00000490730 TGFBR2P37173 567 aa17.14■□□□□ 0.33
SYNE4-205ENST00000490730 CXCR4P61073 352 aa17.14■□□□□ 0.33
SYNE4-205ENST00000490730 ACSM1Q08AH1 577 aa17.14■□□□□ 0.33
SYNE4-205ENST00000490730 BCL2L15Q5TBC7 163 aa17.14■□□□□ 0.33
SYNE4-205ENST00000490730 ZBTB37Q5TC79 503 aa17.14■□□□□ 0.33
SYNE4-205ENST00000490730 FAHD1Q6P587 224 aa17.14■□□□□ 0.33
SYNE4-205ENST00000490730 ZNF322Q6U7Q0 402 aaPredicted RBP17.14■□□□□ 0.33
SYNE4-205ENST00000490730 ACP7Q6ZNF0 438 aa17.14■□□□□ 0.33
SYNE4-205ENST00000490730 PLEKHG7Q6ZR37 379 aa17.14■□□□□ 0.33
SYNE4-205ENST00000490730 BATF2Q8N1L9 274 aa17.14■□□□□ 0.33
SYNE4-205ENST00000490730 OR5D13Q8NGL4 314 aa17.14■□□□□ 0.33
SYNE4-205ENST00000490730 NRBF2Q96F24 287 aa17.14■□□□□ 0.33
SYNE4-205ENST00000490730 SDSLQ96GA7 329 aa17.14■□□□□ 0.33
SYNE4-205ENST00000490730 APOL4Q9BPW4 351 aa17.14■□□□□ 0.33
SYNE4-205ENST00000490730 GPR173Q9NS66 373 aa17.14■□□□□ 0.33
SYNE4-205ENST00000490730 KRT84Q9NSB2 600 aa17.14■□□□□ 0.33
SYNE4-205ENST00000490730 C19orf12Q9NSK7 152 aa17.14■□□□□ 0.33
SYNE4-205ENST00000490730 RASL12Q9NYN1 266 aa17.14■□□□□ 0.33
SYNE4-205ENST00000490730 H2AFY2Q9P0M6 372 aaPredicted RBP17.14■□□□□ 0.33
Retrieved 100 of 20,778 RNA–protein pairs in 28 ms