RNA–Protein interactions for RNA: ENST00000490391.1

PDLIM1-203, Transcript of PDZ and LIM domain 1, humanhuman

TSL 2

Gene PDLIM1, Length 458 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM1-203ENST00000490391 ST6GALNAC6Q969X2 333 aa5.5□□□□□ -1.53
PDLIM1-203ENST00000490391 SPSB4Q96A44 273 aa5.5□□□□□ -1.53
PDLIM1-203ENST00000490391 ZNF799Q96GE5 643 aa5.5□□□□□ -1.53
PDLIM1-203ENST00000490391 FAM110AQ9BQ89 295 aa5.5□□□□□ -1.53
PDLIM1-203ENST00000490391 FGF23Q9GZV9 251 aaPredicted RBP5.5□□□□□ -1.53
PDLIM1-203ENST00000490391 NUAK2Q9H093 628 aa5.5□□□□□ -1.53
PDLIM1-203ENST00000490391 WDR55Q9H6Y2 383 aaPredicted RBP5.5□□□□□ -1.53
PDLIM1-203ENST00000490391 SP140LQ9H930 580 aa5.5□□□□□ -1.53
PDLIM1-203ENST00000490391 ZIM2Q9NZV7 527 aa5.5□□□□□ -1.53
PDLIM1-203ENST00000490391 HAO1Q9UJM8 370 aa5.5□□□□□ -1.53
PDLIM1-203ENST00000490391 FAT1Q14517 4588 aa5.49□□□□□ -1.53
PDLIM1-203ENST00000490391 ANKRD30BLA7E2S9 258 aa5.49□□□□□ -1.53
PDLIM1-203ENST00000490391 M0QX08 132 aa5.49□□□□□ -1.53
PDLIM1-203ENST00000490391 PTP4A3O75365 173 aa5.49□□□□□ -1.53
PDLIM1-203ENST00000490391 IGHG2P01859 326 aa5.49□□□□□ -1.53
PDLIM1-203ENST00000490391 CD14P08571 375 aa5.49□□□□□ -1.53
PDLIM1-203ENST00000490391 DDOSTP39656 456 aa5.49□□□□□ -1.53
PDLIM1-203ENST00000490391 RPL14P50914 215 aaKnown RBP5.49□□□□□ -1.53
PDLIM1-203ENST00000490391 CAPZA1P52907 286 aa5.49□□□□□ -1.53
PDLIM1-203ENST00000490391 TPTEP56180 551 aa5.49□□□□□ -1.53
PDLIM1-203ENST00000490391 SLC35B1P78383 322 aa5.49□□□□□ -1.53
PDLIM1-203ENST00000490391 DYNC1I2Q13409 638 aaKnown RBP5.49□□□□□ -1.53
PDLIM1-203ENST00000490391 IL18R1Q13478 541 aa5.49□□□□□ -1.53
PDLIM1-203ENST00000490391 NFYCQ13952 458 aa5.49□□□□□ -1.53
PDLIM1-203ENST00000490391 SNAPC1Q16533 368 aa5.49□□□□□ -1.53
PDLIM1-203ENST00000490391 FAM76BQ5HYJ3 339 aa5.49□□□□□ -1.53
PDLIM1-203ENST00000490391 RNLSQ5VYX0 342 aa5.49□□□□□ -1.53
PDLIM1-203ENST00000490391 TEX38Q6PEX7 206 aa5.49□□□□□ -1.53
PDLIM1-203ENST00000490391 PTCHD4Q6ZW05 846 aa5.49□□□□□ -1.53
PDLIM1-203ENST00000490391 TCF23Q7RTU1 214 aa5.49□□□□□ -1.53
PDLIM1-203ENST00000490391 LINC00346Q8IVM7 164 aa5.49□□□□□ -1.53
PDLIM1-203ENST00000490391 MICU2Q8IYU8 434 aa5.49□□□□□ -1.53
PDLIM1-203ENST00000490391 STPG2Q8N412 459 aa5.49□□□□□ -1.53
PDLIM1-203ENST00000490391 CD177Q8N6Q3 437 aa5.49□□□□□ -1.53
PDLIM1-203ENST00000490391 OR11H1Q8NG94 326 aa5.49□□□□□ -1.53
PDLIM1-203ENST00000490391 OR2T27Q8NH04 317 aa5.49□□□□□ -1.53
PDLIM1-203ENST00000490391 OR51A7Q8NH64 312 aa5.49□□□□□ -1.53
PDLIM1-203ENST00000490391 NDNFQ8TB73 568 aa5.49□□□□□ -1.53
PDLIM1-203ENST00000490391 C4orf3Q8WVX3 66 aa5.49□□□□□ -1.53
PDLIM1-203ENST00000490391 TAMM41Q96BW9 452 aa5.49□□□□□ -1.53
PDLIM1-203ENST00000490391 BPIFA2Q96DR5 249 aa5.49□□□□□ -1.53
PDLIM1-203ENST00000490391 TSSK2Q96PF2 358 aa5.49□□□□□ -1.53
PDLIM1-203ENST00000490391 PITX2Q99697 317 aa5.49□□□□□ -1.53
PDLIM1-203ENST00000490391 HIPK2Q9H2X6 1198 aa5.49□□□□□ -1.53
PDLIM1-203ENST00000490391 RERGLQ9H628 205 aa5.49□□□□□ -1.53
PDLIM1-203ENST00000490391 YY1AP1Q9H869 796 aa5.49□□□□□ -1.53
PDLIM1-203ENST00000490391 SDR39U1Q9NRG7 319 aaPredicted RBP5.49□□□□□ -1.53
PDLIM1-203ENST00000490391 VAPAQ9P0L0 249 aa5.49□□□□□ -1.53
PDLIM1-203ENST00000490391 CYB5R1Q9UHQ9 305 aa5.49□□□□□ -1.53
PDLIM1-203ENST00000490391 MED31Q9Y3C7 131 aa5.49□□□□□ -1.53
PDLIM1-203ENST00000490391 RAP2CQ9Y3L5 183 aa5.49□□□□□ -1.53
PDLIM1-203ENST00000490391 IGHV2-26A0A0B4J1V2 119 aa5.48□□□□□ -1.53
PDLIM1-203ENST00000490391 MEX3AA1L020 520 aaKnown RBP5.48□□□□□ -1.53
PDLIM1-203ENST00000490391 LINC01548A6NM66 108 aa5.48□□□□□ -1.53
PDLIM1-203ENST00000490391 SERPINE3A8MV23 424 aa5.48□□□□□ -1.53
PDLIM1-203ENST00000490391 XKRYO14609 159 aa5.48□□□□□ -1.53
PDLIM1-203ENST00000490391 SAP30O75446 220 aa5.48□□□□□ -1.53
PDLIM1-203ENST00000490391 MTRF1O75570 445 aaKnown RBP5.48□□□□□ -1.53
PDLIM1-203ENST00000490391 ZNF728P0DKX0 622 aa5.48□□□□□ -1.53
PDLIM1-203ENST00000490391 PIPP12273 146 aaPredicted RBP5.48□□□□□ -1.53
PDLIM1-203ENST00000490391 IFI30P13284 250 aa5.48□□□□□ -1.53
PDLIM1-203ENST00000490391 GPX2P18283 190 aa5.48□□□□□ -1.53
PDLIM1-203ENST00000490391 GLRA1P23415 457 aa5.48□□□□□ -1.53
PDLIM1-203ENST00000490391 HTR1DP28221 377 aa5.48□□□□□ -1.53
PDLIM1-203ENST00000490391 BRS3P32247 399 aa5.48□□□□□ -1.53
PDLIM1-203ENST00000490391 SLC9A3P48764 834 aa5.48□□□□□ -1.53
PDLIM1-203ENST00000490391 POU3F4P49335 361 aa5.48□□□□□ -1.53
PDLIM1-203ENST00000490391 ACTA2P62736 377 aa5.48□□□□□ -1.53
PDLIM1-203ENST00000490391 ACTG2P63267 376 aa5.48□□□□□ -1.53
PDLIM1-203ENST00000490391 ACTC1P68032 377 aa5.48□□□□□ -1.53
PDLIM1-203ENST00000490391 ACTA1P68133 377 aa5.48□□□□□ -1.53
PDLIM1-203ENST00000490391 FAM3AP98173 230 aa5.48□□□□□ -1.53
PDLIM1-203ENST00000490391 PIN1Q13526 163 aaPredicted RBP5.48□□□□□ -1.53
PDLIM1-203ENST00000490391 KRR1Q13601 381 aaKnown RBP5.48□□□□□ -1.53
PDLIM1-203ENST00000490391 ANKDD1AQ495B1 522 aa5.48□□□□□ -1.53
PDLIM1-203ENST00000490391 KLHL12Q53G59 568 aa5.48□□□□□ -1.53
PDLIM1-203ENST00000490391 AGBL2Q5U5Z8 902 aa5.48□□□□□ -1.53
PDLIM1-203ENST00000490391 PGM2L1Q6PCE3 622 aa5.48□□□□□ -1.53
PDLIM1-203ENST00000490391 SMARCD3Q6STE5 483 aa5.48□□□□□ -1.53
PDLIM1-203ENST00000490391 ACP7Q6ZNF0 438 aa5.48□□□□□ -1.53
PDLIM1-203ENST00000490391 SLC16A9Q7RTY1 509 aa5.48□□□□□ -1.53
PDLIM1-203ENST00000490391 OR6V1Q8N148 313 aa5.48□□□□□ -1.53
PDLIM1-203ENST00000490391 C5orf56Q8N8D9 126 aa5.48□□□□□ -1.53
PDLIM1-203ENST00000490391 OR13C2Q8NGS9 318 aa5.48□□□□□ -1.53
PDLIM1-203ENST00000490391 MYOZ3Q8TDC0 251 aa5.48□□□□□ -1.53
PDLIM1-203ENST00000490391 EPS8L3Q8TE67 593 aaKnown RBP5.48□□□□□ -1.53
PDLIM1-203ENST00000490391 ZNF570Q96NI8 536 aa5.48□□□□□ -1.53
PDLIM1-203ENST00000490391 OPA3Q9H6K4 179 aa5.48□□□□□ -1.53
PDLIM1-203ENST00000490391 NMNAT1Q9HAN9 279 aaPredicted RBP5.48□□□□□ -1.53
PDLIM1-203ENST00000490391 GRHPRQ9UBQ7 328 aa5.48□□□□□ -1.53
PDLIM1-203ENST00000490391 RIMS3Q9UJD0 308 aa5.48□□□□□ -1.53
PDLIM1-203ENST00000490391 MOB4Q9Y3A3 225 aa5.48□□□□□ -1.53
PDLIM1-203ENST00000490391 RHBDD3Q9Y3P4 386 aa5.48□□□□□ -1.53
PDLIM1-203ENST00000490391 HSPE1-MOB4S4R3N1 261 aa5.48□□□□□ -1.53
PDLIM1-203ENST00000490391 hCG_38984A0A1B0GV85 526 aa5.47□□□□□ -1.53
PDLIM1-203ENST00000490391 MAGEA13PA6NCF6 341 aa5.47□□□□□ -1.53
PDLIM1-203ENST00000490391 SMIM23A6NLE4 172 aa5.47□□□□□ -1.53
PDLIM1-203ENST00000490391 TMEM210A6NLX4 147 aa5.47□□□□□ -1.53
PDLIM1-203ENST00000490391 H3BSH0 61 aa5.47□□□□□ -1.53
PDLIM1-203ENST00000490391 I3L521 148 aa5.47□□□□□ -1.53
Retrieved 100 of 20,778 RNA–protein pairs in 25.8 ms