RNA–Protein interactions for RNA: ENST00000489853.1

SNRNP40-206, Transcript of small nuclear ribonucleoprotein U5 subunit 40, humanhuman

TSL 2

Gene SNRNP40, Length 1,928 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNRNP40-206ENST00000489853 TBPL1P62380 186 aa4.21□□□□□ -1.74
SNRNP40-206ENST00000489853 CCL20P78556 96 aa4.21□□□□□ -1.74
SNRNP40-206ENST00000489853 RPL19P84098 196 aaKnown RBP4.21□□□□□ -1.74
SNRNP40-206ENST00000489853 DUSP8Q13202 625 aa4.21□□□□□ -1.74
SNRNP40-206ENST00000489853 FZD2Q14332 565 aa4.21□□□□□ -1.74
SNRNP40-206ENST00000489853 ICAM4Q14773 271 aa4.21□□□□□ -1.74
SNRNP40-206ENST00000489853 SLC9A3R2Q15599 337 aa4.21□□□□□ -1.74
SNRNP40-206ENST00000489853 OR1Q1Q15612 314 aa4.21□□□□□ -1.74
SNRNP40-206ENST00000489853 HSPB2Q16082 182 aa4.21□□□□□ -1.74
SNRNP40-206ENST00000489853 BATFQ16520 125 aa4.21□□□□□ -1.74
SNRNP40-206ENST00000489853 ZNF260Q3ZCT1 412 aa4.21□□□□□ -1.74
SNRNP40-206ENST00000489853 PSRC1Q6PGN9 363 aaPredicted RBP4.21□□□□□ -1.74
SNRNP40-206ENST00000489853 C16orf59Q7L2K0 433 aa4.21□□□□□ -1.74
SNRNP40-206ENST00000489853 SLC16A9Q7RTY1 509 aa4.21□□□□□ -1.74
SNRNP40-206ENST00000489853 TRAPPC6BQ86SZ2 158 aa4.21□□□□□ -1.74
SNRNP40-206ENST00000489853 SGPP2Q8IWX5 399 aa4.21□□□□□ -1.74
SNRNP40-206ENST00000489853 H1FOOQ8IZA3 346 aaPredicted RBP4.21□□□□□ -1.74
SNRNP40-206ENST00000489853 CLEC18CQ8NCF0 446 aa4.21□□□□□ -1.74
SNRNP40-206ENST00000489853 NPEPL1Q8NDH3 523 aa4.21□□□□□ -1.74
SNRNP40-206ENST00000489853 Q8NFD4 153 aa4.21□□□□□ -1.74
SNRNP40-206ENST00000489853 OR56B2PQ8NGI1 322 aa4.21□□□□□ -1.74
SNRNP40-206ENST00000489853 OR51L1Q8NGJ5 315 aa4.21□□□□□ -1.74
SNRNP40-206ENST00000489853 OR1L6Q8NGR2 347 aa4.21□□□□□ -1.74
SNRNP40-206ENST00000489853 FAM213BQ8TBF2 198 aa4.21□□□□□ -1.74
SNRNP40-206ENST00000489853 ZNF480Q8WV37 535 aa4.21□□□□□ -1.74
SNRNP40-206ENST00000489853 TMEM230Q96A57 120 aa4.21□□□□□ -1.74
SNRNP40-206ENST00000489853 TBX15Q96SF7 602 aa4.21□□□□□ -1.74
SNRNP40-206ENST00000489853 SMIM3Q9BZL3 60 aa4.21□□□□□ -1.74
SNRNP40-206ENST00000489853 MAGT1Q9H0U3 335 aa4.21□□□□□ -1.74
SNRNP40-206ENST00000489853 ZMAT4Q9H898 229 aa4.21□□□□□ -1.74
SNRNP40-206ENST00000489853 APOBEC3CQ9NRW3 190 aaKnown RBP eCLIP4.21□□□□□ -1.74
SNRNP40-206ENST00000489853 RXFP3Q9NSD7 469 aa4.21□□□□□ -1.74
SNRNP40-206ENST00000489853 C5AR2Q9P296 337 aa4.21□□□□□ -1.74
SNRNP40-206ENST00000489853 MRM2Q9UI43 246 aaKnown RBP4.21□□□□□ -1.74
SNRNP40-206ENST00000489853 TUBD1Q9UJT1 453 aa4.21□□□□□ -1.74
SNRNP40-206ENST00000489853 ABT1Q9ULW3 272 aaKnown RBP4.21□□□□□ -1.74
SNRNP40-206ENST00000489853 NSG2Q9Y328 171 aa4.21□□□□□ -1.74
SNRNP40-206ENST00000489853 IER3IP1Q9Y5U9 82 aa4.21□□□□□ -1.74
SNRNP40-206ENST00000489853 LAMA3Q16787 3333 aa4.21□□□□□ -1.74
SNRNP40-206ENST00000489853 PLXNB3Q9ULL4 1909 aa4.21□□□□□ -1.74
SNRNP40-206ENST00000489853 LOC105371242A0A075B767 164 aa4.21□□□□□ -1.74
SNRNP40-206ENST00000489853 A0A087WV48 116 aa4.21□□□□□ -1.74
SNRNP40-206ENST00000489853 MBLAC1A4D2B0 266 aaPredicted RBP4.21□□□□□ -1.74
SNRNP40-206ENST00000489853 FITM1A5D6W6 292 aa4.21□□□□□ -1.74
SNRNP40-206ENST00000489853 CASTOR2A6NHX0 329 aa4.21□□□□□ -1.74
SNRNP40-206ENST00000489853 PRR32B1ATL7 298 aa4.21□□□□□ -1.74
SNRNP40-206ENST00000489853 GRM6O15303 877 aa4.21□□□□□ -1.74
SNRNP40-206ENST00000489853 TMPRSS11DO60235 418 aa4.21□□□□□ -1.74
SNRNP40-206ENST00000489853 NDUFB8O95169 186 aa4.21□□□□□ -1.74
SNRNP40-206ENST00000489853 NDUFB2O95178 105 aa4.21□□□□□ -1.74
SNRNP40-206ENST00000489853 C1orf105O95561 183 aa4.21□□□□□ -1.74
SNRNP40-206ENST00000489853 ABHD16AO95870 558 aa4.21□□□□□ -1.74
SNRNP40-206ENST00000489853 PFN1P07737 140 aaKnown RBP4.21□□□□□ -1.74
SNRNP40-206ENST00000489853 NBEAP1P0C6P0 100 aa4.21□□□□□ -1.74
SNRNP40-206ENST00000489853 LAMP2P13473 410 aa4.21□□□□□ -1.74
SNRNP40-206ENST00000489853 CEACAM1P13688 526 aa4.21□□□□□ -1.74
SNRNP40-206ENST00000489853 ADMP35318 185 aa4.21□□□□□ -1.74
SNRNP40-206ENST00000489853 THPOP40225 353 aa4.21□□□□□ -1.74
SNRNP40-206ENST00000489853 TFPI2P48307 235 aa4.21□□□□□ -1.74
SNRNP40-206ENST00000489853 CLDN6P56747 220 aa4.21□□□□□ -1.74
SNRNP40-206ENST00000489853 ARF6P62330 175 aa4.21□□□□□ -1.74
SNRNP40-206ENST00000489853 REEP5Q00765 189 aa4.21□□□□□ -1.74
SNRNP40-206ENST00000489853 ZNF117Q03924 483 aa4.21□□□□□ -1.74
SNRNP40-206ENST00000489853 FHL1Q13642 323 aa4.21□□□□□ -1.74
SNRNP40-206ENST00000489853 FAM189A2Q15884 450 aa4.21□□□□□ -1.74
SNRNP40-206ENST00000489853 TMEM183BQ1AE95 376 aa4.21□□□□□ -1.74
SNRNP40-206ENST00000489853 LILRA6Q6PI73 481 aa4.21□□□□□ -1.74
SNRNP40-206ENST00000489853 SPSB3Q6PJ21 355 aa4.21□□□□□ -1.74
SNRNP40-206ENST00000489853 ZNF66Q6ZN08 573 aa4.21□□□□□ -1.74
SNRNP40-206ENST00000489853 DPY19L2P2Q6ZN68 376 aa4.21□□□□□ -1.74
SNRNP40-206ENST00000489853 TEX43Q6ZNM6 134 aa4.21□□□□□ -1.74
SNRNP40-206ENST00000489853 Q7L0L9 218 aa4.21□□□□□ -1.74
SNRNP40-206ENST00000489853 TMPRSS7Q7RTY8 843 aa4.21□□□□□ -1.74
SNRNP40-206ENST00000489853 LHFPL4Q7Z7J7 247 aa4.21□□□□□ -1.74
SNRNP40-206ENST00000489853 ADGRE4PQ86SQ3 457 aa4.21□□□□□ -1.74
SNRNP40-206ENST00000489853 CATSPERDQ86XM0 798 aa4.21□□□□□ -1.74
SNRNP40-206ENST00000489853 KMT5CQ86Y97 462 aa4.21□□□□□ -1.74
SNRNP40-206ENST00000489853 WDFY1Q8IWB7 410 aa4.21□□□□□ -1.74
SNRNP40-206ENST00000489853 MAML2Q8IZL2 1156 aaPredicted RBP4.21□□□□□ -1.74
SNRNP40-206ENST00000489853 CYB561D1Q8N8Q1 229 aa4.21□□□□□ -1.74
SNRNP40-206ENST00000489853 ZNF740Q8NDX6 193 aa4.21□□□□□ -1.74
SNRNP40-206ENST00000489853 ZNF738Q8NE65 137 aa4.21□□□□□ -1.74
SNRNP40-206ENST00000489853 GPR119Q8TDV5 335 aa4.21□□□□□ -1.74
SNRNP40-206ENST00000489853 ZCCHC14Q8WYQ9 949 aaKnown RBP4.21□□□□□ -1.74
SNRNP40-206ENST00000489853 ERGIC1Q969X5 290 aa4.21□□□□□ -1.74
SNRNP40-206ENST00000489853 FGGYQ96C11 551 aa4.21□□□□□ -1.74
SNRNP40-206ENST00000489853 RBMXL1Q96E39 390 aaKnown RBP4.21□□□□□ -1.74
SNRNP40-206ENST00000489853 SLC35A4Q96G79 324 aa4.21□□□□□ -1.74
SNRNP40-206ENST00000489853 ZNF514Q96K75 400 aaPredicted RBP4.21□□□□□ -1.74
SNRNP40-206ENST00000489853 MS4A10Q96PG2 267 aa4.21□□□□□ -1.74
SNRNP40-206ENST00000489853 RNF2Q99496 336 aa4.21□□□□□ -1.74
SNRNP40-206ENST00000489853 KXD1Q9BQD3 176 aa4.21□□□□□ -1.74
SNRNP40-206ENST00000489853 NUDT9Q9BW91 350 aa4.21□□□□□ -1.74
SNRNP40-206ENST00000489853 MS4A8Q9BY19 250 aa4.21□□□□□ -1.74
SNRNP40-206ENST00000489853 HIPK2Q9H2X6 1198 aa4.21□□□□□ -1.74
SNRNP40-206ENST00000489853 PLK3Q9H4B4 646 aa4.21□□□□□ -1.74
SNRNP40-206ENST00000489853 C5orf66Q9H5L9 145 aa4.21□□□□□ -1.74
SNRNP40-206ENST00000489853 WFDC1Q9HC57 220 aa4.21□□□□□ -1.74
SNRNP40-206ENST00000489853 FLRT3Q9NZU0 649 aa4.21□□□□□ -1.74
SNRNP40-206ENST00000489853 HEATR5AQ86XA9 2040 aa4.2□□□□□ -1.74
Retrieved 100 of 20,778 RNA–protein pairs in 29.3 ms