RNA–Protein interactions for RNA: ENST00000489741.1

PRPF40A-210, Transcript of pre-mRNA processing factor 40 homolog A, humanhuman

TSL 3

Gene PRPF40A, Length 776 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRPF40A-210ENST00000489741 DVL1O14640 695 aa5.21□□□□□ -1.58
PRPF40A-210ENST00000489741 ADAM20O43506 726 aa5.21□□□□□ -1.58
PRPF40A-210ENST00000489741 CCDC22O60826 627 aa5.21□□□□□ -1.58
PRPF40A-210ENST00000489741 TSPAN9O75954 239 aa5.21□□□□□ -1.58
PRPF40A-210ENST00000489741 GADD45GO95257 159 aa5.21□□□□□ -1.58
PRPF40A-210ENST00000489741 RENP00797 406 aa5.21□□□□□ -1.58
PRPF40A-210ENST00000489741 IGHV4-59P01825 116 aa5.21□□□□□ -1.58
PRPF40A-210ENST00000489741 GYPAP02724 150 aa5.21□□□□□ -1.58
PRPF40A-210ENST00000489741 CRYBA1P05813 215 aa5.21□□□□□ -1.58
PRPF40A-210ENST00000489741 BTF3P20290 206 aaKnown RBP5.21□□□□□ -1.58
PRPF40A-210ENST00000489741 TGM4P49221 684 aa5.21□□□□□ -1.58
PRPF40A-210ENST00000489741 CENPAP49450 140 aa5.21□□□□□ -1.58
PRPF40A-210ENST00000489741 ARF6P62330 175 aa5.21□□□□□ -1.58
PRPF40A-210ENST00000489741 TSPAN31Q12999 210 aa5.21□□□□□ -1.58
PRPF40A-210ENST00000489741 TEX30Q5JUR7 227 aa5.21□□□□□ -1.58
PRPF40A-210ENST00000489741 GLYATL3Q5SZD4 288 aa5.21□□□□□ -1.58
PRPF40A-210ENST00000489741 ATPAF1Q5TC12 328 aaPredicted RBP5.21□□□□□ -1.58
PRPF40A-210ENST00000489741 METAP1DQ6UB28 335 aaPredicted RBP5.21□□□□□ -1.58
PRPF40A-210ENST00000489741 ZNF826PQ6ZT77 177 aa5.21□□□□□ -1.58
PRPF40A-210ENST00000489741 BTN2A1Q7KYR7 527 aa5.21□□□□□ -1.58
PRPF40A-210ENST00000489741 PRSS45Q7RTY3 260 aa5.21□□□□□ -1.58
PRPF40A-210ENST00000489741 SDR9C7Q8NEX9 313 aa5.21□□□□□ -1.58
PRPF40A-210ENST00000489741 OR2AE1Q8NHA4 323 aa5.21□□□□□ -1.58
PRPF40A-210ENST00000489741 OSR1Q8TAX0 266 aaPredicted RBP5.21□□□□□ -1.58
PRPF40A-210ENST00000489741 FANK1Q8TC84 345 aa5.21□□□□□ -1.58
PRPF40A-210ENST00000489741 FAM162AQ96A26 154 aa5.21□□□□□ -1.58
PRPF40A-210ENST00000489741 PYURFQ96I23 114 aa5.21□□□□□ -1.58
PRPF40A-210ENST00000489741 TECTBQ96PL2 329 aa5.21□□□□□ -1.58
PRPF40A-210ENST00000489741 RBM4BQ9BQ04 359 aaKnown RBP5.21□□□□□ -1.58
PRPF40A-210ENST00000489741 IFT27Q9BW83 186 aa5.21□□□□□ -1.58
PRPF40A-210ENST00000489741 NMNAT2Q9BZQ4 307 aa5.21□□□□□ -1.58
PRPF40A-210ENST00000489741 TRIM15Q9C019 465 aa5.21□□□□□ -1.58
PRPF40A-210ENST00000489741 MMP27Q9H306 513 aa5.21□□□□□ -1.58
PRPF40A-210ENST00000489741 RNPEPL1Q9HAU8 725 aa5.21□□□□□ -1.58
PRPF40A-210ENST00000489741 IL1RAPQ9NPH3 570 aa5.21□□□□□ -1.58
PRPF40A-210ENST00000489741 KRCC1Q9NPI7 259 aaPredicted RBP5.21□□□□□ -1.58
PRPF40A-210ENST00000489741 TNFRSF19Q9NS68 423 aa5.21□□□□□ -1.58
PRPF40A-210ENST00000489741 TBC1D23Q9NUY8 699 aa5.21□□□□□ -1.58
PRPF40A-210ENST00000489741 IL20Q9NYY1 176 aa5.21□□□□□ -1.58
PRPF40A-210ENST00000489741 CD300AQ9UGN4 299 aa5.21□□□□□ -1.58
PRPF40A-210ENST00000489741 STEAP1Q9UHE8 339 aa5.21□□□□□ -1.58
PRPF40A-210ENST00000489741 SAMD4AQ9UPU9 718 aaKnown RBP5.21□□□□□ -1.58
PRPF40A-210ENST00000489741 KPTNQ9Y664 436 aa5.21□□□□□ -1.58
PRPF40A-210ENST00000489741 DOCK11Q5JSL3 2073 aa5.2□□□□□ -1.58
PRPF40A-210ENST00000489741 A0A1B0GW55 424 aa5.2□□□□□ -1.58
PRPF40A-210ENST00000489741 M0QZ24 198 aa5.2□□□□□ -1.58
PRPF40A-210ENST00000489741 TIMM23O14925 209 aa5.2□□□□□ -1.58
PRPF40A-210ENST00000489741 OR10H3O60404 316 aa5.2□□□□□ -1.58
PRPF40A-210ENST00000489741 GPR137BO60478 399 aa5.2□□□□□ -1.58
PRPF40A-210ENST00000489741 DUX4L2P0CJ85 424 aa5.2□□□□□ -1.58
PRPF40A-210ENST00000489741 DUX4L3P0CJ86 424 aa5.2□□□□□ -1.58
PRPF40A-210ENST00000489741 DUX4L4P0CJ87 422 aa5.2□□□□□ -1.58
PRPF40A-210ENST00000489741 DUX4L5P0CJ88 424 aa5.2□□□□□ -1.58
PRPF40A-210ENST00000489741 DUX4L6P0CJ89 424 aa5.2□□□□□ -1.58
PRPF40A-210ENST00000489741 DUX4L7P0CJ90 424 aa5.2□□□□□ -1.58
PRPF40A-210ENST00000489741 HSD17B1P14061 328 aa5.2□□□□□ -1.58
PRPF40A-210ENST00000489741 MUC1P15941 1255 aaPredicted RBP5.2□□□□□ -1.58
PRPF40A-210ENST00000489741 PRDX6P30041 224 aa5.2□□□□□ -1.58
PRPF40A-210ENST00000489741 PYCR1P32322 319 aa5.2□□□□□ -1.58
PRPF40A-210ENST00000489741 DDOSTP39656 456 aa5.2□□□□□ -1.58
PRPF40A-210ENST00000489741 RPS27P42677 84 aaKnown RBP5.2□□□□□ -1.58
PRPF40A-210ENST00000489741 NUDT2P50583 147 aa5.2□□□□□ -1.58
PRPF40A-210ENST00000489741 ELF3P78545 371 aaPredicted RBP5.2□□□□□ -1.58
PRPF40A-210ENST00000489741 FAM3AP98173 230 aa5.2□□□□□ -1.58
PRPF40A-210ENST00000489741 KHDRBS1Q07666 443 aaKnown RBP eCLIP5.2□□□□□ -1.58
PRPF40A-210ENST00000489741 KRT72Q14CN4 511 aa5.2□□□□□ -1.58
PRPF40A-210ENST00000489741 TAF9Q16594 264 aa5.2□□□□□ -1.58
PRPF40A-210ENST00000489741 CDONQ4KMG0 1287 aa5.2□□□□□ -1.58
PRPF40A-210ENST00000489741 KLHL12Q53G59 568 aa5.2□□□□□ -1.58
PRPF40A-210ENST00000489741 FAM76BQ5HYJ3 339 aa5.2□□□□□ -1.58
PRPF40A-210ENST00000489741 METTL11BQ5VVY1 283 aa5.2□□□□□ -1.58
PRPF40A-210ENST00000489741 ZNF770Q6IQ21 691 aaPredicted RBP5.2□□□□□ -1.58
PRPF40A-210ENST00000489741 PGBD2Q6P3X8 592 aa5.2□□□□□ -1.58
PRPF40A-210ENST00000489741 DUX4L9Q6RFH8 374 aaPredicted RBP5.2□□□□□ -1.58
PRPF40A-210ENST00000489741 C17orf107Q6ZR85 190 aa5.2□□□□□ -1.58
PRPF40A-210ENST00000489741 C1orf122Q6ZSJ8 110 aa5.2□□□□□ -1.58
PRPF40A-210ENST00000489741 Q6ZSV7 163 aa5.2□□□□□ -1.58
PRPF40A-210ENST00000489741 KRT74Q7RTS7 529 aa5.2□□□□□ -1.58
PRPF40A-210ENST00000489741 MRPL21Q7Z2W9 205 aaKnown RBP5.2□□□□□ -1.58
PRPF40A-210ENST00000489741 WDR86Q86TI4 376 aa5.2□□□□□ -1.58
PRPF40A-210ENST00000489741 FGFRL1Q8N441 504 aa5.2□□□□□ -1.58
PRPF40A-210ENST00000489741 Q8N7P7 452 aa5.2□□□□□ -1.58
PRPF40A-210ENST00000489741 NANOGP1Q8N7R0 232 aa5.2□□□□□ -1.58
PRPF40A-210ENST00000489741 CYB561A3Q8NBI2 242 aa5.2□□□□□ -1.58
PRPF40A-210ENST00000489741 OR56B2PQ8NGI1 322 aa5.2□□□□□ -1.58
PRPF40A-210ENST00000489741 C8orf46Q8TAG6 207 aa5.2□□□□□ -1.58
PRPF40A-210ENST00000489741 GNPDA2Q8TDQ7 276 aa5.2□□□□□ -1.58
PRPF40A-210ENST00000489741 NPRL2Q8WTW4 380 aa5.2□□□□□ -1.58
PRPF40A-210ENST00000489741 TNFRSF14Q92956 283 aa5.2□□□□□ -1.58
PRPF40A-210ENST00000489741 LHX4Q969G2 390 aa5.2□□□□□ -1.58
PRPF40A-210ENST00000489741 SPTSSAQ969W0 71 aa5.2□□□□□ -1.58
PRPF40A-210ENST00000489741 SGK3Q96BR1 496 aa5.2□□□□□ -1.58
PRPF40A-210ENST00000489741 CMTM5Q96DZ9 223 aa5.2□□□□□ -1.58
PRPF40A-210ENST00000489741 ADAT1Q9BUB4 502 aaKnown RBP5.2□□□□□ -1.58
PRPF40A-210ENST00000489741 TLNRD1Q9H1K6 362 aa5.2□□□□□ -1.58
PRPF40A-210ENST00000489741 MMADHCQ9H3L0 296 aaPredicted RBP5.2□□□□□ -1.58
PRPF40A-210ENST00000489741 FN3KQ9H479 309 aa5.2□□□□□ -1.58
PRPF40A-210ENST00000489741 OPA3Q9H6K4 179 aa5.2□□□□□ -1.58
PRPF40A-210ENST00000489741 SPAG4Q9NPE6 437 aa5.2□□□□□ -1.58
PRPF40A-210ENST00000489741 ARGLU1Q9NWB6 273 aaPredicted RBP5.2□□□□□ -1.58
Retrieved 100 of 20,778 RNA–protein pairs in 46.7 ms