RNA–Protein interactions for RNA: ENST00000488937.1

PRPF4-203, Transcript of pre-mRNA processing factor 4, humanhuman

TSL 3

Gene PRPF4, Length 567 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRPF4-203ENST00000488937 KLHL21Q9UJP4 597 aa2.57□□□□□ -2
PRPF4-203ENST00000488937 MOKQ9UQ07 419 aa2.57□□□□□ -2
PRPF4-203ENST00000488937 FHAD1B1AJZ9 1412 aa2.57□□□□□ -2
PRPF4-203ENST00000488937 IGHV3-35A0A0C4DH35 117 aa2.56□□□□□ -2
PRPF4-203ENST00000488937 PRR23AA6NEV1 266 aa2.56□□□□□ -2
PRPF4-203ENST00000488937 KRTAP4-16G5E9R7 235 aaPredicted RBP2.56□□□□□ -2
PRPF4-203ENST00000488937 KMOO15229 486 aa2.56□□□□□ -2
PRPF4-203ENST00000488937 SLC31A2O15432 143 aa2.56□□□□□ -2
PRPF4-203ENST00000488937 NPIPB7O75200 414 aa2.56□□□□□ -2
PRPF4-203ENST00000488937 LYPLA1O75608 230 aaPredicted RBP2.56□□□□□ -2
PRPF4-203ENST00000488937 KBTBD11O94819 623 aa2.56□□□□□ -2
PRPF4-203ENST00000488937 DUSP14O95147 198 aaKnown RBP2.56□□□□□ -2
PRPF4-203ENST00000488937 VENTXO95231 258 aa2.56□□□□□ -2
PRPF4-203ENST00000488937 SNAPINO95295 136 aa2.56□□□□□ -2
PRPF4-203ENST00000488937 KLF8O95600 359 aaPredicted RBP2.56□□□□□ -2
PRPF4-203ENST00000488937 KRT75O95678 551 aa2.56□□□□□ -2
PRPF4-203ENST00000488937 PTHP01270 115 aa2.56□□□□□ -2
PRPF4-203ENST00000488937 MMP7P09237 267 aaPredicted RBP2.56□□□□□ -2
PRPF4-203ENST00000488937 IGHV3-43DP0DP04 118 aa2.56□□□□□ -2
PRPF4-203ENST00000488937 MYL9P24844 172 aa2.56□□□□□ -2
PRPF4-203ENST00000488937 CXCR1P25024 350 aa2.56□□□□□ -2
PRPF4-203ENST00000488937 RPS12P25398 132 aaKnown RBP2.56□□□□□ -2
PRPF4-203ENST00000488937 GDF1P27539 372 aa2.56□□□□□ -2
PRPF4-203ENST00000488937 HTR1EP28566 365 aa2.56□□□□□ -2
PRPF4-203ENST00000488937 SSTR5P35346 364 aa2.56□□□□□ -2
PRPF4-203ENST00000488937 CEACAM6P40199 344 aa2.56□□□□□ -2
PRPF4-203ENST00000488937 PMELP40967 661 aa2.56□□□□□ -2
PRPF4-203ENST00000488937 GCLMP48507 274 aa2.56□□□□□ -2
PRPF4-203ENST00000488937 ZNF138P52744 262 aa2.56□□□□□ -2
PRPF4-203ENST00000488937 PFN3P60673 137 aa2.56□□□□□ -2
PRPF4-203ENST00000488937 RPL36AP83881 106 aaKnown RBP2.56□□□□□ -2
PRPF4-203ENST00000488937 OR2F1Q13607 317 aa2.56□□□□□ -2
PRPF4-203ENST00000488937 CLEC12BQ2HXU8 276 aa2.56□□□□□ -2
PRPF4-203ENST00000488937 ZNF718Q3SXZ3 478 aa2.56□□□□□ -2
PRPF4-203ENST00000488937 PRR30Q53SZ7 412 aaPredicted RBP2.56□□□□□ -2
PRPF4-203ENST00000488937 CST9Q5W186 159 aa2.56□□□□□ -2
PRPF4-203ENST00000488937 TMEM42Q69YG0 159 aa2.56□□□□□ -2
PRPF4-203ENST00000488937 LAMTOR1Q6IAA8 161 aa2.56□□□□□ -2
PRPF4-203ENST00000488937 ZNF329Q86UD4 541 aa2.56□□□□□ -2
PRPF4-203ENST00000488937 NT5DC3Q86UY8 548 aa2.56□□□□□ -2
PRPF4-203ENST00000488937 C10orf107Q8IVU9 208 aa2.56□□□□□ -2
PRPF4-203ENST00000488937 STK40Q8N2I9 435 aa2.56□□□□□ -2
PRPF4-203ENST00000488937 Q8NBF4 154 aa2.56□□□□□ -2
PRPF4-203ENST00000488937 PXT1Q8NFP0 134 aa2.56□□□□□ -2
PRPF4-203ENST00000488937 OR6N1Q8NGY5 312 aa2.56□□□□□ -2
PRPF4-203ENST00000488937 LMO3Q8TAP4 145 aa2.56□□□□□ -2
PRPF4-203ENST00000488937 C16orf78Q8WTQ4 265 aa2.56□□□□□ -2
PRPF4-203ENST00000488937 NPRL2Q8WTW4 380 aa2.56□□□□□ -2
PRPF4-203ENST00000488937 ITLN1Q8WWA0 313 aa2.56□□□□□ -2
PRPF4-203ENST00000488937 ASB13Q8WXK3 278 aa2.56□□□□□ -2
PRPF4-203ENST00000488937 SNF8Q96H20 258 aa2.56□□□□□ -2
PRPF4-203ENST00000488937 OR10C1Q96KK4 312 aa2.56□□□□□ -2
PRPF4-203ENST00000488937 SIGLEC12Q96PQ1 595 aa2.56□□□□□ -2
PRPF4-203ENST00000488937 ZNF184Q99676 751 aaPredicted RBP2.56□□□□□ -2
PRPF4-203ENST00000488937 DHRS9Q9BPW9 319 aa2.56□□□□□ -2
PRPF4-203ENST00000488937 C19orf24Q9BVV8 132 aa2.56□□□□□ -2
PRPF4-203ENST00000488937 SLIRPQ9GZT3 109 aaKnown RBP2.56□□□□□ -2
PRPF4-203ENST00000488937 MAP1LC3AQ9H492 121 aa2.56□□□□□ -2
PRPF4-203ENST00000488937 VSIRQ9H7M9 311 aa2.56□□□□□ -2
PRPF4-203ENST00000488937 RRAGDQ9NQL2 400 aaPredicted RBP2.56□□□□□ -2
PRPF4-203ENST00000488937 ARMCX1Q9P291 453 aa2.56□□□□□ -2
PRPF4-203ENST00000488937 ZNF629Q9UEG4 869 aaPredicted RBP2.56□□□□□ -2
PRPF4-203ENST00000488937 SMPXQ9UHP9 88 aa2.56□□□□□ -2
PRPF4-203ENST00000488937 RAB22AQ9UL26 194 aa2.56□□□□□ -2
PRPF4-203ENST00000488937 RAB26Q9ULW5 256 aa2.56□□□□□ -2
PRPF4-203ENST00000488937 SLC25A15Q9Y619 301 aa2.56□□□□□ -2
PRPF4-203ENST00000488937 ARL5AQ9Y689 179 aa2.56□□□□□ -2
PRPF4-203ENST00000488937 A0A1W2PP64 1363 aa2.56□□□□□ -2
PRPF4-203ENST00000488937 WDR62O43379 1518 aa2.56□□□□□ -2
PRPF4-203ENST00000488937 SMIM9A6NGZ8 99 aa2.55□□□□□ -2
PRPF4-203ENST00000488937 SYCE1LA8MT33 242 aa2.55□□□□□ -2
PRPF4-203ENST00000488937 EPM2AB3EWF7 344 aa2.55□□□□□ -2
PRPF4-203ENST00000488937 C15orf65H3BRN8 121 aa2.55□□□□□ -2
PRPF4-203ENST00000488937 KCNK1O00180 336 aa2.55□□□□□ -2
PRPF4-203ENST00000488937 BMPR1BO00238 502 aa2.55□□□□□ -2
PRPF4-203ENST00000488937 SOCS3O14543 225 aa2.55□□□□□ -2
PRPF4-203ENST00000488937 ZNF253O75346 499 aa2.55□□□□□ -2
PRPF4-203ENST00000488937 ENTPD6O75354 484 aa2.55□□□□□ -2
PRPF4-203ENST00000488937 FOXH1O75593 365 aa2.55□□□□□ -2
PRPF4-203ENST00000488937 SOX14O95416 240 aa2.55□□□□□ -2
PRPF4-203ENST00000488937 TNNC2P02585 160 aa2.55□□□□□ -2
PRPF4-203ENST00000488937 CSF3P09919 207 aa2.55□□□□□ -2
PRPF4-203ENST00000488937 ERGP11308 486 aa2.55□□□□□ -2
PRPF4-203ENST00000488937 TCN2P20062 427 aa2.55□□□□□ -2
PRPF4-203ENST00000488937 ALOX5APP20292 161 aa2.55□□□□□ -2
PRPF4-203ENST00000488937 FMO3P31513 532 aa2.55□□□□□ -2
PRPF4-203ENST00000488937 CD70P32970 193 aa2.55□□□□□ -2
PRPF4-203ENST00000488937 PPOXP50336 477 aa2.55□□□□□ -2
PRPF4-203ENST00000488937 NDUFA8P51970 172 aa2.55□□□□□ -2
PRPF4-203ENST00000488937 KRTAP10-3P60369 221 aa2.55□□□□□ -2
PRPF4-203ENST00000488937 RPS23P62266 143 aaKnown RBP2.55□□□□□ -2
PRPF4-203ENST00000488937 CACNG7P62955 275 aa2.55□□□□□ -2
PRPF4-203ENST00000488937 S100A12P80511 92 aa2.55□□□□□ -2
PRPF4-203ENST00000488937 FMODQ06828 376 aa2.55□□□□□ -2
PRPF4-203ENST00000488937 ZNF266Q14584 549 aa2.55□□□□□ -2
PRPF4-203ENST00000488937 IHHQ14623 411 aa2.55□□□□□ -2
PRPF4-203ENST00000488937 PON3Q15166 354 aa2.55□□□□□ -2
PRPF4-203ENST00000488937 SHHQ15465 462 aa2.55□□□□□ -2
PRPF4-203ENST00000488937 CASC10Q5T4H9 136 aa2.55□□□□□ -2
PRPF4-203ENST00000488937 MARC1Q5VT66 337 aa2.55□□□□□ -2
Retrieved 100 of 20,778 RNA–protein pairs in 35.4 ms