RNA–Protein interactions for RNA: ENST00000488765.1

MCF2L-229, Transcript of MCF.2 cell line derived transforming sequence like, humanhuman

TSL 2

Gene MCF2L, Length 3,205 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MCF2L-229ENST00000488765 CSTAP01040 98 aa14.3□□□□□ -0.12
MCF2L-229ENST00000488765 CEACAM1P13688 526 aa14.3□□□□□ -0.12
MCF2L-229ENST00000488765 VHLLQ6RSH7 139 aa14.3□□□□□ -0.12
MCF2L-229ENST00000488765 YAF2Q8IY57 180 aa14.3□□□□□ -0.12
MCF2L-229ENST00000488765 OR52R1Q8NGF1 315 aa14.3□□□□□ -0.12
MCF2L-229ENST00000488765 NEK7Q8TDX7 302 aa14.3□□□□□ -0.12
MCF2L-229ENST00000488765 RBM18Q96H35 190 aaKnown RBP14.3□□□□□ -0.12
MCF2L-229ENST00000488765 SERINC2Q96SA4 455 aa14.3□□□□□ -0.12
MCF2L-229ENST00000488765 ADAM19Q9H013 955 aa14.3□□□□□ -0.12
MCF2L-229ENST00000488765 SRPK3Q9UPE1 567 aa14.3□□□□□ -0.12
MCF2L-229ENST00000488765 CACNA1DQ01668 2161 aa14.3□□□□□ -0.12
MCF2L-229ENST00000488765 PRNPP04156 253 aa14.3□□□□□ -0.12
MCF2L-229ENST00000488765 RPLP1P05386 114 aaKnown RBP14.3□□□□□ -0.12
MCF2L-229ENST00000488765 RAB4AP20338 218 aa14.3□□□□□ -0.12
MCF2L-229ENST00000488765 SLC37A1P57057 533 aa14.3□□□□□ -0.12
MCF2L-229ENST00000488765 RPL18Q07020 188 aaKnown RBP14.3□□□□□ -0.12
MCF2L-229ENST00000488765 MAJINQ3KP22 176 aa14.3□□□□□ -0.12
MCF2L-229ENST00000488765 CST9LP1Q5W188 147 aa14.3□□□□□ -0.12
MCF2L-229ENST00000488765 OPN5Q6U736 354 aa14.3□□□□□ -0.12
MCF2L-229ENST00000488765 ZNF524Q96C55 264 aa14.3□□□□□ -0.12
MCF2L-229ENST00000488765 TVP23CQ96ET8 276 aa14.3□□□□□ -0.12
MCF2L-229ENST00000488765 TMED3Q9Y3Q3 217 aa14.3□□□□□ -0.12
MCF2L-229ENST00000488765 KIAA2026Q5HYC2 2103 aa14.3□□□□□ -0.12
MCF2L-229ENST00000488765 FTCDNL1E5RQL4 147 aa14.3□□□□□ -0.12
MCF2L-229ENST00000488765 ZNF217O75362 1048 aa14.3□□□□□ -0.12
MCF2L-229ENST00000488765 APBB3O95704 486 aa14.3□□□□□ -0.12
MCF2L-229ENST00000488765 CST2P09228 141 aa14.3□□□□□ -0.12
MCF2L-229ENST00000488765 PTGER4P35408 488 aa14.3□□□□□ -0.12
MCF2L-229ENST00000488765 GLIPR1P48060 266 aa14.3□□□□□ -0.12
MCF2L-229ENST00000488765 PPM1FP49593 454 aaPredicted RBP14.3□□□□□ -0.12
MCF2L-229ENST00000488765 IDH3GP51553 393 aaPredicted RBP14.3□□□□□ -0.12
MCF2L-229ENST00000488765 GNB2P62879 340 aa14.3□□□□□ -0.12
MCF2L-229ENST00000488765 PLAC9Q5JTB6 97 aa14.3□□□□□ -0.12
MCF2L-229ENST00000488765 SGPP2Q8IWX5 399 aa14.3□□□□□ -0.12
MCF2L-229ENST00000488765 C1orf87Q8N0U7 546 aa14.3□□□□□ -0.12
MCF2L-229ENST00000488765 KTI12Q96EK9 354 aaPredicted RBP14.3□□□□□ -0.12
MCF2L-229ENST00000488765 SDSLQ96GA7 329 aa14.3□□□□□ -0.12
MCF2L-229ENST00000488765 SPACA7Q96KW9 195 aa14.3□□□□□ -0.12
MCF2L-229ENST00000488765 TSPAN32Q96QS1 320 aa14.3□□□□□ -0.12
MCF2L-229ENST00000488765 CELSR3Q9NYQ7 3312 aa14.29□□□□□ -0.12
MCF2L-229ENST00000488765 LOC102724200A0A096LPH7 203 aaPredicted RBP14.29□□□□□ -0.12
MCF2L-229ENST00000488765 BORCS7-ASMTA0A0B4J1R7 106 aa14.29□□□□□ -0.12
MCF2L-229ENST00000488765 A0A1W2PR80 420 aa14.29□□□□□ -0.12
MCF2L-229ENST00000488765 S1PR1P21453 382 aa14.29□□□□□ -0.12
MCF2L-229ENST00000488765 RPL23AP62750 156 aaKnown RBP14.29□□□□□ -0.12
MCF2L-229ENST00000488765 BEND2Q8NDZ0 799 aa14.29□□□□□ -0.12
MCF2L-229ENST00000488765 ARHGAP5-AS1Q96IT6 56 aa14.29□□□□□ -0.12
MCF2L-229ENST00000488765 SHDQ96IW2 340 aa14.29□□□□□ -0.12
MCF2L-229ENST00000488765 CHST11Q9NPF2 352 aa14.29□□□□□ -0.12
MCF2L-229ENST00000488765 GNG13Q9P2W3 67 aa14.29□□□□□ -0.12
MCF2L-229ENST00000488765 PITPNC1Q9UKF7 332 aa14.29□□□□□ -0.12
MCF2L-229ENST00000488765 SLC7A11Q9UPY5 501 aa14.29□□□□□ -0.12
MCF2L-229ENST00000488765 LAMP3Q9UQV4 416 aa14.29□□□□□ -0.12
MCF2L-229ENST00000488765 PHF3Q92576 2039 aaKnown RBP14.29□□□□□ -0.12
MCF2L-229ENST00000488765 SYT7O43581 403 aa14.29□□□□□ -0.12
MCF2L-229ENST00000488765 DEDDO75618 318 aa14.29□□□□□ -0.12
MCF2L-229ENST00000488765 BCKDHBP21953 392 aa14.29□□□□□ -0.12
MCF2L-229ENST00000488765 TAS2R31P59538 309 aa14.29□□□□□ -0.12
MCF2L-229ENST00000488765 CBLN3Q6UW01 205 aa14.29□□□□□ -0.12
MCF2L-229ENST00000488765 OR14C36Q8NHC7 312 aa14.29□□□□□ -0.12
MCF2L-229ENST00000488765 ADOQ96SZ5 270 aa14.29□□□□□ -0.12
MCF2L-229ENST00000488765 MBNL1Q9NR56 388 aaKnown RBP14.29□□□□□ -0.12
MCF2L-229ENST00000488765 AK3Q9UIJ7 227 aa14.29□□□□□ -0.12
MCF2L-229ENST00000488765 MEMO1Q9Y316 297 aa14.29□□□□□ -0.12
MCF2L-229ENST00000488765 TLCD2A6NGC4 264 aa14.28□□□□□ -0.12
MCF2L-229ENST00000488765 ZNF878C9JN71 531 aa14.28□□□□□ -0.12
MCF2L-229ENST00000488765 LINC01565O15544 149 aa14.28□□□□□ -0.12
MCF2L-229ENST00000488765 ONECUT2O95948 504 aa14.28□□□□□ -0.12
MCF2L-229ENST00000488765 SRP19P09132 144 aaKnown RBP14.28□□□□□ -0.12
MCF2L-229ENST00000488765 CISD3P0C7P0 127 aa14.28□□□□□ -0.12
MCF2L-229ENST00000488765 FGF5P12034 268 aa14.28□□□□□ -0.12
MCF2L-229ENST00000488765 PAX1P15863 534 aa14.28□□□□□ -0.12
MCF2L-229ENST00000488765 EGR3Q06889 387 aa14.28□□□□□ -0.12
MCF2L-229ENST00000488765 FAHD2BQ6P2I3 314 aaPredicted RBP14.28□□□□□ -0.12
MCF2L-229ENST00000488765 CALHM1Q8IU99 346 aa14.28□□□□□ -0.12
MCF2L-229ENST00000488765 TMEM183AQ8IXX5 376 aa14.28□□□□□ -0.12
MCF2L-229ENST00000488765 OTOSQ8NHW6 89 aa14.28□□□□□ -0.12
MCF2L-229ENST00000488765 TSLPQ969D9 159 aa14.28□□□□□ -0.12
MCF2L-229ENST00000488765 FAHD2AQ96GK7 314 aa14.28□□□□□ -0.12
MCF2L-229ENST00000488765 SYT3Q9BQG1 590 aa14.28□□□□□ -0.12
MCF2L-229ENST00000488765 LMF2Q9BU23 707 aaKnown RBP14.28□□□□□ -0.12
MCF2L-229ENST00000488765 MAGT1Q9H0U3 335 aa14.28□□□□□ -0.12
MCF2L-229ENST00000488765 DNAJC4Q9NNZ3 241 aa14.28□□□□□ -0.12
MCF2L-229ENST00000488765 LRP12Q9Y561 859 aa14.28□□□□□ -0.12
MCF2L-229ENST00000488765 SHANK1Q9Y566 2161 aa14.28□□□□□ -0.12
MCF2L-229ENST00000488765 FRYLO94915 3013 aa14.28□□□□□ -0.12
MCF2L-229ENST00000488765 GALR2O43603 387 aaPredicted RBP14.28□□□□□ -0.12
MCF2L-229ENST00000488765 WISP1O95388 367 aa14.28□□□□□ -0.12
MCF2L-229ENST00000488765 MPV17LQ2QL34 196 aa14.28□□□□□ -0.12
MCF2L-229ENST00000488765 LYZL2Q7Z4W2 148 aa14.28□□□□□ -0.12
MCF2L-229ENST00000488765 OR52E1Q8NGJ3 308 aa14.28□□□□□ -0.12
MCF2L-229ENST00000488765 OR1P1Q8NH06 330 aa14.28□□□□□ -0.12
MCF2L-229ENST00000488765 IL22RA2Q969J5 263 aa14.28□□□□□ -0.12
MCF2L-229ENST00000488765 ANKRD9Q96BM1 317 aaPredicted RBP14.28□□□□□ -0.12
MCF2L-229ENST00000488765 MRPS18CQ9Y3D5 142 aaKnown RBP14.28□□□□□ -0.12
MCF2L-229ENST00000488765 DVL1O14640 695 aa14.28□□□□□ -0.12
MCF2L-229ENST00000488765 CTHP32929 405 aa14.28□□□□□ -0.12
MCF2L-229ENST00000488765 P2RY2P41231 377 aa14.28□□□□□ -0.12
MCF2L-229ENST00000488765 TNFSF10P50591 281 aa14.28□□□□□ -0.12
MCF2L-229ENST00000488765 FXYD4P59646 89 aa14.28□□□□□ -0.12
Retrieved 100 of 20,778 RNA–protein pairs in 38 ms