RNA–Protein interactions for RNA: ENST00000486227.5

HDAC6-228, Transcript of histone deacetylase 6, humanhuman

TSL 2

Gene HDAC6, Length 4,718 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC6-228ENST00000486227 SFT2D1Q8WV19 159 aa9.81□□□□□ -0.84
HDAC6-228ENST00000486227 EMG1Q92979 244 aaKnown RBP9.81□□□□□ -0.84
HDAC6-228ENST00000486227 OR5V1Q9UGF6 321 aa9.81□□□□□ -0.84
HDAC6-228ENST00000486227 MRM2Q9UI43 246 aaKnown RBP9.81□□□□□ -0.84
HDAC6-228ENST00000486227 PILRBQ9UKJ0 227 aa9.81□□□□□ -0.84
HDAC6-228ENST00000486227 MFSD2BA6NFX1 497 aa9.81□□□□□ -0.84
HDAC6-228ENST00000486227 RNASEK-C17orf49H0YIS7 233 aa9.81□□□□□ -0.84
HDAC6-228ENST00000486227 DLL1O00548 723 aa9.81□□□□□ -0.84
HDAC6-228ENST00000486227 M1APQ8TC57 530 aa9.81□□□□□ -0.84
HDAC6-228ENST00000486227 TOLLIPQ9H0E2 274 aa9.81□□□□□ -0.84
HDAC6-228ENST00000486227 A0A1W2PR77 199 aa9.8□□□□□ -0.84
HDAC6-228ENST00000486227 OR6C6A6NF89 314 aa9.8□□□□□ -0.84
HDAC6-228ENST00000486227 DCTN6O00399 190 aa9.8□□□□□ -0.84
HDAC6-228ENST00000486227 HS3ST1O14792 307 aa9.8□□□□□ -0.84
HDAC6-228ENST00000486227 CFDP00746 253 aaPredicted RBP9.8□□□□□ -0.84
HDAC6-228ENST00000486227 GLAP06280 429 aa9.8□□□□□ -0.84
HDAC6-228ENST00000486227 FAM157BP0CG42 384 aa9.8□□□□□ -0.84
HDAC6-228ENST00000486227 BMP5P22003 454 aa9.8□□□□□ -0.84
HDAC6-228ENST00000486227 RNPS1Q15287 305 aaKnown RBP9.8□□□□□ -0.84
HDAC6-228ENST00000486227 AADACL3Q5VUY0 350 aa9.8□□□□□ -0.84
HDAC6-228ENST00000486227 OR11H4Q8NGC9 324 aa9.8□□□□□ -0.84
HDAC6-228ENST00000486227 NMNAT2Q9BZQ4 307 aa9.8□□□□□ -0.84
HDAC6-228ENST00000486227 TMPRSS5Q9H3S3 457 aa9.8□□□□□ -0.84
HDAC6-228ENST00000486227 DSPPQ9NZW4 1301 aa9.8□□□□□ -0.84
HDAC6-228ENST00000486227 SIP14410 1827 aa9.8□□□□□ -0.84
HDAC6-228ENST00000486227 SDK2Q58EX2 2172 aa9.8□□□□□ -0.84
HDAC6-228ENST00000486227 EPPINO95925 133 aa9.8□□□□□ -0.84
HDAC6-228ENST00000486227 GP1BAP07359 652 aa9.8□□□□□ -0.84
HDAC6-228ENST00000486227 NQO2P16083 231 aa9.8□□□□□ -0.84
HDAC6-228ENST00000486227 SPINK14Q6IE38 97 aa9.8□□□□□ -0.84
HDAC6-228ENST00000486227 HSD17B11Q8NBQ5 300 aa9.8□□□□□ -0.84
HDAC6-228ENST00000486227 OR51A2Q8NGJ7 313 aa9.8□□□□□ -0.84
HDAC6-228ENST00000486227 OR1J1Q8NGS3 322 aa9.8□□□□□ -0.84
HDAC6-228ENST00000486227 OR10D3Q8NH80 312 aa9.8□□□□□ -0.84
HDAC6-228ENST00000486227 SRCAPQ6ZRS2 3230 aa9.8□□□□□ -0.84
HDAC6-228ENST00000486227 NYNRINQ9P2P1 1898 aaKnown RBP9.8□□□□□ -0.84
HDAC6-228ENST00000486227 H7C1Q1 480 aa9.8□□□□□ -0.84
HDAC6-228ENST00000486227 EFSO43281 561 aa9.8□□□□□ -0.84
HDAC6-228ENST00000486227 OR13C7P0DN81 318 aa9.8□□□□□ -0.84
HDAC6-228ENST00000486227 NDUFB7P17568 137 aa9.8□□□□□ -0.84
HDAC6-228ENST00000486227 PI3P19957 117 aa9.8□□□□□ -0.84
HDAC6-228ENST00000486227 ECI1P42126 302 aa9.8□□□□□ -0.84
HDAC6-228ENST00000486227 LIMS1P48059 325 aa9.8□□□□□ -0.84
HDAC6-228ENST00000486227 LAMTOR1Q6IAA8 161 aa9.8□□□□□ -0.84
HDAC6-228ENST00000486227 ANKRD16Q6P6B7 361 aa9.8□□□□□ -0.84
HDAC6-228ENST00000486227 PNPLA5Q7Z6Z6 429 aaPredicted RBP9.8□□□□□ -0.84
HDAC6-228ENST00000486227 DNASE2BQ8WZ79 361 aa9.8□□□□□ -0.84
HDAC6-228ENST00000486227 RDH5Q92781 318 aa9.8□□□□□ -0.84
HDAC6-228ENST00000486227 EXOSC5Q9NQT4 235 aaKnown RBP eCLIP9.8□□□□□ -0.84
HDAC6-228ENST00000486227 SLC17A5Q9NRA2 495 aa9.8□□□□□ -0.84
HDAC6-228ENST00000486227 WDR81Q562E7 1941 aa9.8□□□□□ -0.84
HDAC6-228ENST00000486227 GPR179Q6PRD1 2367 aa9.8□□□□□ -0.84
HDAC6-228ENST00000486227 PHF1O43189 567 aaPredicted RBP9.8□□□□□ -0.84
HDAC6-228ENST00000486227 TNFSF12O43508 249 aa9.8□□□□□ -0.84
HDAC6-228ENST00000486227 ANGPTL7O43827 346 aa9.8□□□□□ -0.84
HDAC6-228ENST00000486227 SFTA3P0C7M3 94 aa9.8□□□□□ -0.84
HDAC6-228ENST00000486227 RD3LP0DJH9 198 aa9.8□□□□□ -0.84
HDAC6-228ENST00000486227 CCL3P10147 92 aa9.8□□□□□ -0.84
HDAC6-228ENST00000486227 SRD5A2P31213 254 aa9.8□□□□□ -0.84
HDAC6-228ENST00000486227 ZNF266Q14584 549 aa9.8□□□□□ -0.84
HDAC6-228ENST00000486227 PLXDC2Q6UX71 529 aa9.8□□□□□ -0.84
HDAC6-228ENST00000486227 SLC25A26Q70HW3 274 aa9.8□□□□□ -0.84
HDAC6-228ENST00000486227 SLC16A13Q7RTY0 426 aa9.8□□□□□ -0.84
HDAC6-228ENST00000486227 KCNE5Q9UJ90 142 aa9.8□□□□□ -0.84
HDAC6-228ENST00000486227 LIPT2A6NK58 231 aa9.79□□□□□ -0.84
HDAC6-228ENST00000486227 XRCC2O43543 280 aa9.79□□□□□ -0.84
HDAC6-228ENST00000486227 MT-ND4LP03901 98 aa9.79□□□□□ -0.84
HDAC6-228ENST00000486227 HOXD4P09016 255 aaPredicted RBP9.79□□□□□ -0.84
HDAC6-228ENST00000486227 CXCL2P19875 107 aa9.79□□□□□ -0.84
HDAC6-228ENST00000486227 IL3RAP26951 378 aa9.79□□□□□ -0.84
HDAC6-228ENST00000486227 FABP6P51161 128 aa9.79□□□□□ -0.84
HDAC6-228ENST00000486227 CATR1Q13166 79 aa9.79□□□□□ -0.84
HDAC6-228ENST00000486227 DHRS2Q13268 280 aa9.79□□□□□ -0.84
HDAC6-228ENST00000486227 RAB31Q13636 194 aa9.79□□□□□ -0.84
HDAC6-228ENST00000486227 DEGS2Q6QHC5 323 aa9.79□□□□□ -0.84
HDAC6-228ENST00000486227 OR1F12Q8NHA8 337 aa9.79□□□□□ -0.84
HDAC6-228ENST00000486227 HES7Q9BYE0 225 aa9.79□□□□□ -0.84
HDAC6-228ENST00000486227 NECAP2Q9NVZ3 263 aa9.79□□□□□ -0.84
HDAC6-228ENST00000486227 GAR1Q9NY12 217 aaKnown RBP9.79□□□□□ -0.84
HDAC6-228ENST00000486227 POLDIP2Q9Y2S7 368 aa9.79□□□□□ -0.84
HDAC6-228ENST00000486227 CHD5Q8TDI0 1954 aa9.79□□□□□ -0.84
HDAC6-228ENST00000486227 FAM90A27PA6NNH2 459 aa9.79□□□□□ -0.84
HDAC6-228ENST00000486227 DEGS1O15121 323 aa9.79□□□□□ -0.84
HDAC6-228ENST00000486227 GALR2O43603 387 aaPredicted RBP9.79□□□□□ -0.84
HDAC6-228ENST00000486227 PTP4A3O75365 173 aa9.79□□□□□ -0.84
HDAC6-228ENST00000486227 PATE4P0C8F1 98 aa9.79□□□□□ -0.84
HDAC6-228ENST00000486227 INSM1Q01101 510 aaPredicted RBP9.79□□□□□ -0.84
HDAC6-228ENST00000486227 FABP9Q0Z7S8 132 aa9.79□□□□□ -0.84
HDAC6-228ENST00000486227 CBLN2Q8IUK8 224 aa9.79□□□□□ -0.84
HDAC6-228ENST00000486227 SLX1AQ9BQ83 275 aa9.79□□□□□ -0.84
HDAC6-228ENST00000486227 MED9Q9NWA0 146 aa9.79□□□□□ -0.84
HDAC6-228ENST00000486227 ZNF732B4DXR9 585 aa9.79□□□□□ -0.84
HDAC6-228ENST00000486227 GSTP1P09211 210 aaKnown RBP9.79□□□□□ -0.84
HDAC6-228ENST00000486227 OMGP23515 440 aa9.79□□□□□ -0.84
HDAC6-228ENST00000486227 SOX8P57073 446 aa9.79□□□□□ -0.84
HDAC6-228ENST00000486227 EDDM3AQ14507 147 aa9.79□□□□□ -0.84
HDAC6-228ENST00000486227 STRAPQ9Y3F4 350 aaKnown RBP9.79□□□□□ -0.84
HDAC6-228ENST00000486227 A0A0B4J293 547 aa9.78□□□□□ -0.84
HDAC6-228ENST00000486227 BTBD17A6NE02 478 aa9.78□□□□□ -0.84
HDAC6-228ENST00000486227 NME2P1O60361 137 aa9.78□□□□□ -0.84
Retrieved 100 of 20,778 RNA–protein pairs in 41.4 ms