RNA–Protein interactions for RNA: ENST00000485618.1

SF3A1-208, Transcript of splicing factor 3a subunit 1, humanhuman

TSL 2

Gene SF3A1, Length 593 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SF3A1-208ENST00000485618 TMEM155Q4W5P6 130 aa6.98□□□□□ -1.29
SF3A1-208ENST00000485618 TMEM255AQ5JRV8 349 aa6.98□□□□□ -1.29
SF3A1-208ENST00000485618 ZNF773Q6PK81 442 aa6.98□□□□□ -1.29
SF3A1-208ENST00000485618 LRRC28Q86X40 367 aaPredicted RBP6.98□□□□□ -1.29
SF3A1-208ENST00000485618 Q8IYB0 196 aa6.98□□□□□ -1.29
SF3A1-208ENST00000485618 YIPF5Q969M3 257 aa6.98□□□□□ -1.29
SF3A1-208ENST00000485618 TMEM106AQ96A25 262 aa6.98□□□□□ -1.29
SF3A1-208ENST00000485618 C12orf43Q96C57 262 aaKnown RBP6.98□□□□□ -1.29
SF3A1-208ENST00000485618 OPALINQ96PE5 141 aa6.98□□□□□ -1.29
SF3A1-208ENST00000485618 NR1H4Q96RI1 486 aaPredicted RBP6.98□□□□□ -1.29
SF3A1-208ENST00000485618 S100A13Q99584 98 aa6.98□□□□□ -1.29
SF3A1-208ENST00000485618 MGLLQ99685 303 aa6.98□□□□□ -1.29
SF3A1-208ENST00000485618 GAL3ST1Q99999 423 aa6.98□□□□□ -1.29
SF3A1-208ENST00000485618 PKIBQ9C010 78 aa6.98□□□□□ -1.29
SF3A1-208ENST00000485618 BPESC1Q9GZL8 116 aa6.98□□□□□ -1.29
SF3A1-208ENST00000485618 OR51I2Q9H344 312 aa6.98□□□□□ -1.29
SF3A1-208ENST00000485618 RHOFQ9HBH0 211 aa6.98□□□□□ -1.29
SF3A1-208ENST00000485618 TMEM138Q9NPI0 162 aa6.98□□□□□ -1.29
SF3A1-208ENST00000485618 ACOT13Q9NPJ3 140 aa6.98□□□□□ -1.29
SF3A1-208ENST00000485618 GPR173Q9NS66 373 aa6.98□□□□□ -1.29
SF3A1-208ENST00000485618 UFSP2Q9NUQ7 469 aa6.98□□□□□ -1.29
SF3A1-208ENST00000485618 UBAP1Q9NZ09 502 aa6.98□□□□□ -1.29
SF3A1-208ENST00000485618 DNAJB11Q9UBS4 358 aa6.98□□□□□ -1.29
SF3A1-208ENST00000485618 MIOXQ9UGB7 285 aa6.98□□□□□ -1.29
SF3A1-208ENST00000485618 LOC100289279A0A1B0GTE1 492 aa6.97□□□□□ -1.29
SF3A1-208ENST00000485618 PQLC2LA1A4F0 135 aa6.97□□□□□ -1.29
SF3A1-208ENST00000485618 TRIM64A6NGJ6 449 aa6.97□□□□□ -1.29
SF3A1-208ENST00000485618 TRIM64BA6NI03 449 aa6.97□□□□□ -1.29
SF3A1-208ENST00000485618 VWC2LB2RUY7 222 aa6.97□□□□□ -1.29
SF3A1-208ENST00000485618 ZNF879B4DU55 563 aa6.97□□□□□ -1.29
SF3A1-208ENST00000485618 INAFM1C9JVW0 142 aa6.97□□□□□ -1.29
SF3A1-208ENST00000485618 LYNX1G3V0Z9 82 aa6.97□□□□□ -1.29
SF3A1-208ENST00000485618 J3QT63 122 aa6.97□□□□□ -1.29
SF3A1-208ENST00000485618 LGALS8O00214 317 aa6.97□□□□□ -1.29
SF3A1-208ENST00000485618 CDIPTO14735 213 aa6.97□□□□□ -1.29
SF3A1-208ENST00000485618 SULT1B1O43704 296 aa6.97□□□□□ -1.29
SF3A1-208ENST00000485618 ARL6IP5O75915 188 aa6.97□□□□□ -1.29
SF3A1-208ENST00000485618 ALDOBP05062 364 aa6.97□□□□□ -1.29
SF3A1-208ENST00000485618 ACAA1P09110 424 aaPredicted RBP6.97□□□□□ -1.29
SF3A1-208ENST00000485618 LYNX1P0DP58 116 aa6.97□□□□□ -1.29
SF3A1-208ENST00000485618 HAAOP46952 286 aa6.97□□□□□ -1.29
SF3A1-208ENST00000485618 PSMD7P51665 324 aa6.97□□□□□ -1.29
SF3A1-208ENST00000485618 ZNF154Q13106 437 aa6.97□□□□□ -1.29
SF3A1-208ENST00000485618 TPBGQ13641 420 aa6.97□□□□□ -1.29
SF3A1-208ENST00000485618 SMIM21Q3B7S5 101 aa6.97□□□□□ -1.29
SF3A1-208ENST00000485618 PRAMEF6Q5VXH4 476 aa6.97□□□□□ -1.29
SF3A1-208ENST00000485618 CYB5R2Q6BCY4 276 aa6.97□□□□□ -1.29
SF3A1-208ENST00000485618 HAGHLQ6PII5 290 aaPredicted RBP6.97□□□□□ -1.29
SF3A1-208ENST00000485618 FAM90A1Q86YD7 464 aa6.97□□□□□ -1.29
SF3A1-208ENST00000485618 CDH26Q8IXH8 852 aa6.97□□□□□ -1.29
SF3A1-208ENST00000485618 TEX29Q8N6K0 151 aa6.97□□□□□ -1.29
SF3A1-208ENST00000485618 PNLDC1Q8NA58 520 aaKnown RBP6.97□□□□□ -1.29
SF3A1-208ENST00000485618 ZSCAN4Q8NAM6 433 aaPredicted RBP6.97□□□□□ -1.29
SF3A1-208ENST00000485618 SCCPDHQ8NBX0 429 aa6.97□□□□□ -1.29
SF3A1-208ENST00000485618 ZNF485Q8NCK3 441 aa6.97□□□□□ -1.29
SF3A1-208ENST00000485618 TSPAN14Q8NG11 270 aa6.97□□□□□ -1.29
SF3A1-208ENST00000485618 RPS4Y2Q8TD47 263 aa6.97□□□□□ -1.29
SF3A1-208ENST00000485618 LRRC29Q8WV35 223 aa6.97□□□□□ -1.29
SF3A1-208ENST00000485618 RNF166Q96A37 237 aaPredicted RBP6.97□□□□□ -1.29
SF3A1-208ENST00000485618 MED30Q96HR3 178 aa6.97□□□□□ -1.29
SF3A1-208ENST00000485618 GPER1Q99527 375 aa6.97□□□□□ -1.29
SF3A1-208ENST00000485618 TLNRD1Q9H1K6 362 aa6.97□□□□□ -1.29
SF3A1-208ENST00000485618 TCF7L1Q9HCS4 588 aa6.97□□□□□ -1.29
SF3A1-208ENST00000485618 PAK1IP1Q9NWT1 392 aaPredicted RBP6.97□□□□□ -1.29
SF3A1-208ENST00000485618 TREM2Q9NZC2 230 aa6.97□□□□□ -1.29
SF3A1-208ENST00000485618 WIPI2Q9Y4P8 454 aa6.97□□□□□ -1.29
SF3A1-208ENST00000485618 FN1P02751 2386 aaKnown RBP6.96□□□□□ -1.29
SF3A1-208ENST00000485618 DYSFO75923 2080 aa6.96□□□□□ -1.29
SF3A1-208ENST00000485618 IGHV3-64DA0A0J9YX35 117 aa6.96□□□□□ -1.3
SF3A1-208ENST00000485618 PNMA8CA0A1B0GUJ8 204 aa6.96□□□□□ -1.3
SF3A1-208ENST00000485618 OOEPA6NGQ2 149 aa6.96□□□□□ -1.3
SF3A1-208ENST00000485618 A6NIN4 97 aa6.96□□□□□ -1.3
SF3A1-208ENST00000485618 NKX6-3A6NJ46 265 aa6.96□□□□□ -1.3
SF3A1-208ENST00000485618 B4DSR2 109 aa6.96□□□□□ -1.3
SF3A1-208ENST00000485618 TRAPPC2LH3BP13 241 aa6.96□□□□□ -1.3
SF3A1-208ENST00000485618 H3BSH0 61 aa6.96□□□□□ -1.3
SF3A1-208ENST00000485618 H3BUI4 141 aa6.96□□□□□ -1.3
SF3A1-208ENST00000485618 FOXH1O75593 365 aa6.96□□□□□ -1.3
SF3A1-208ENST00000485618 NXPH2O95156 264 aa6.96□□□□□ -1.3
SF3A1-208ENST00000485618 CYB5R3P00387 301 aaPredicted RBP6.96□□□□□ -1.3
SF3A1-208ENST00000485618 TMEM225BP0DP42 221 aa6.96□□□□□ -1.3
SF3A1-208ENST00000485618 CPEP16870 476 aa6.96□□□□□ -1.3
SF3A1-208ENST00000485618 GALP22466 123 aa6.96□□□□□ -1.3
SF3A1-208ENST00000485618 AZGP1P25311 298 aaKnown RBP6.96□□□□□ -1.3
SF3A1-208ENST00000485618 BDKRB2P30411 391 aa6.96□□□□□ -1.3
SF3A1-208ENST00000485618 GABRA5P31644 462 aa6.96□□□□□ -1.3
SF3A1-208ENST00000485618 THBS2P35442 1172 aa6.96□□□□□ -1.3
SF3A1-208ENST00000485618 TGFBR2P37173 567 aa6.96□□□□□ -1.3
SF3A1-208ENST00000485618 SOX2P48431 317 aa6.96□□□□□ -1.3
SF3A1-208ENST00000485618 NPY4RP50391 375 aa6.96□□□□□ -1.3
SF3A1-208ENST00000485618 EMX1Q04741 257 aaPredicted RBP6.96□□□□□ -1.3
SF3A1-208ENST00000485618 IL24Q13007 206 aa6.96□□□□□ -1.3
SF3A1-208ENST00000485618 DOC2BQ14184 412 aa6.96□□□□□ -1.3
SF3A1-208ENST00000485618 GPR176Q14439 515 aa6.96□□□□□ -1.3
SF3A1-208ENST00000485618 MPPED2Q15777 294 aa6.96□□□□□ -1.3
SF3A1-208ENST00000485618 UBE2V2Q15819 145 aa6.96□□□□□ -1.3
SF3A1-208ENST00000485618 C11orf91Q3C1V1 193 aa6.96□□□□□ -1.3
SF3A1-208ENST00000485618 ACSM3Q53FZ2 586 aa6.96□□□□□ -1.3
SF3A1-208ENST00000485618 ARMCX4Q5H9R4 360 aa6.96□□□□□ -1.3
SF3A1-208ENST00000485618 LIPKQ5VXJ0 399 aa6.96□□□□□ -1.3
Retrieved 100 of 20,778 RNA–protein pairs in 39.1 ms