RNA–Protein interactions for RNA: ENST00000485247.1

PTPN4-210, Transcript of protein tyrosine phosphatase, non-receptor type 4, humanhuman

TSL 3

Gene PTPN4, Length 590 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN4-210ENST00000485247 ODF3BA8MYP8 253 aa4.14□□□□□ -1.75
PTPN4-210ENST00000485247 NPIPB4C9JG80 1138 aa4.14□□□□□ -1.75
PTPN4-210ENST00000485247 H3BSH0 61 aa4.14□□□□□ -1.75
PTPN4-210ENST00000485247 CLIC1O00299 241 aa4.14□□□□□ -1.75
PTPN4-210ENST00000485247 CDIPTO14735 213 aa4.14□□□□□ -1.75
PTPN4-210ENST00000485247 POLR3GO15318 223 aaPredicted RBP4.14□□□□□ -1.75
PTPN4-210ENST00000485247 OR7A10O76100 309 aa4.14□□□□□ -1.75
PTPN4-210ENST00000485247 MT-ND1P03886 318 aa4.14□□□□□ -1.75
PTPN4-210ENST00000485247 ACAA1P09110 424 aaPredicted RBP4.14□□□□□ -1.75
PTPN4-210ENST00000485247 ACSM4P0C7M7 580 aa4.14□□□□□ -1.75
PTPN4-210ENST00000485247 ZCCHC18P0CG32 403 aa4.14□□□□□ -1.75
PTPN4-210ENST00000485247 PGA5P0DJD9 388 aa4.14□□□□□ -1.75
PTPN4-210ENST00000485247 LBPP18428 481 aa4.14□□□□□ -1.75
PTPN4-210ENST00000485247 CNTFRP26992 372 aa4.14□□□□□ -1.75
PTPN4-210ENST00000485247 NAA10P41227 235 aaPredicted RBP4.14□□□□□ -1.75
PTPN4-210ENST00000485247 INSL3P51460 131 aa4.14□□□□□ -1.75
PTPN4-210ENST00000485247 CAPZA1P52907 286 aa4.14□□□□□ -1.75
PTPN4-210ENST00000485247 RAP1BP61224 184 aa4.14□□□□□ -1.75
PTPN4-210ENST00000485247 LSM6P62312 80 aaKnown RBP4.14□□□□□ -1.75
PTPN4-210ENST00000485247 RAP1AP62834 184 aa4.14□□□□□ -1.75
PTPN4-210ENST00000485247 RPL31P62899 125 aaKnown RBP4.14□□□□□ -1.75
PTPN4-210ENST00000485247 CDK6Q00534 326 aa4.14□□□□□ -1.75
PTPN4-210ENST00000485247 ZNF92Q03936 586 aa4.14□□□□□ -1.75
PTPN4-210ENST00000485247 MZT1Q08AG7 82 aa4.14□□□□□ -1.75
PTPN4-210ENST00000485247 C6orf10Q5SRN2 563 aa4.14□□□□□ -1.75
PTPN4-210ENST00000485247 ZNF626Q68DY1 528 aa4.14□□□□□ -1.75
PTPN4-210ENST00000485247 REEP3Q6NUK4 255 aa4.14□□□□□ -1.75
PTPN4-210ENST00000485247 SLC2A7Q6PXP3 512 aa4.14□□□□□ -1.75
PTPN4-210ENST00000485247 CORO6Q6QEF8 472 aa4.14□□□□□ -1.75
PTPN4-210ENST00000485247 C16orf82Q7Z2V1 217 aa4.14□□□□□ -1.75
PTPN4-210ENST00000485247 MAVSQ7Z434 540 aa4.14□□□□□ -1.75
PTPN4-210ENST00000485247 RBM45Q8IUH3 476 aaKnown RBP4.14□□□□□ -1.75
PTPN4-210ENST00000485247 C4orf33Q8N1A6 199 aa4.14□□□□□ -1.75
PTPN4-210ENST00000485247 OR1M1Q8NGA1 313 aa4.14□□□□□ -1.75
PTPN4-210ENST00000485247 OR4M1Q8NGD0 313 aa4.14□□□□□ -1.75
PTPN4-210ENST00000485247 OR2AE1Q8NHA4 323 aa4.14□□□□□ -1.75
PTPN4-210ENST00000485247 ANGPTL6Q8NI99 470 aa4.14□□□□□ -1.75
PTPN4-210ENST00000485247 NDNFQ8TB73 568 aa4.14□□□□□ -1.75
PTPN4-210ENST00000485247 STMN2Q93045 179 aa4.14□□□□□ -1.75
PTPN4-210ENST00000485247 ST6GALNAC6Q969X2 333 aa4.14□□□□□ -1.75
PTPN4-210ENST00000485247 MPP4Q96JB8 637 aa4.14□□□□□ -1.75
PTPN4-210ENST00000485247 RAB3IPQ96QF0 476 aaPredicted RBP4.14□□□□□ -1.75
PTPN4-210ENST00000485247 FMO2Q99518 471 aa4.14□□□□□ -1.75
PTPN4-210ENST00000485247 ZBTB18Q99592 522 aa4.14□□□□□ -1.75
PTPN4-210ENST00000485247 COQ7Q99807 217 aa4.14□□□□□ -1.75
PTPN4-210ENST00000485247 ATF6BQ99941 703 aa4.14□□□□□ -1.75
PTPN4-210ENST00000485247 FAM110AQ9BQ89 295 aa4.14□□□□□ -1.75
PTPN4-210ENST00000485247 HDHD2Q9H0R4 259 aa4.14□□□□□ -1.75
PTPN4-210ENST00000485247 TSPYL1Q9H0U9 437 aa4.14□□□□□ -1.75
PTPN4-210ENST00000485247 DNTTIP1Q9H147 329 aa4.14□□□□□ -1.75
PTPN4-210ENST00000485247 EVA1AQ9H8M9 152 aa4.14□□□□□ -1.75
PTPN4-210ENST00000485247 GRPEL1Q9HAV7 217 aa4.14□□□□□ -1.75
PTPN4-210ENST00000485247 RETNQ9HD89 108 aa4.14□□□□□ -1.75
PTPN4-210ENST00000485247 USE1Q9NZ43 259 aa4.14□□□□□ -1.75
PTPN4-210ENST00000485247 MRPL15Q9P015 296 aaKnown RBP4.14□□□□□ -1.75
PTPN4-210ENST00000485247 KIAA1456Q9P272 454 aa4.14□□□□□ -1.75
PTPN4-210ENST00000485247 ATPIF1Q9UII2 106 aa4.14□□□□□ -1.75
PTPN4-210ENST00000485247 CORO2BQ9UQ03 480 aa4.14□□□□□ -1.75
PTPN4-210ENST00000485247 TEX13CA0A0J9YWL9 993 aa4.13□□□□□ -1.75
PTPN4-210ENST00000485247 A0A1W2PPH5 198 aa4.13□□□□□ -1.75
PTPN4-210ENST00000485247 LINC01548A6NM66 108 aa4.13□□□□□ -1.75
PTPN4-210ENST00000485247 OR2AT4A6NND4 320 aa4.13□□□□□ -1.75
PTPN4-210ENST00000485247 SERPINE3A8MV23 424 aa4.13□□□□□ -1.75
PTPN4-210ENST00000485247 AKR7A2O43488 359 aa4.13□□□□□ -1.75
PTPN4-210ENST00000485247 SLC16A7O60669 478 aa4.13□□□□□ -1.75
PTPN4-210ENST00000485247 SERPINB7O75635 380 aa4.13□□□□□ -1.75
PTPN4-210ENST00000485247 OR2F2O95006 317 aa4.13□□□□□ -1.75
PTPN4-210ENST00000485247 HNRNPCP07910 306 aaKnown RBP eCLIP4.13□□□□□ -1.75
PTPN4-210ENST00000485247 ABHD2P08910 425 aa4.13□□□□□ -1.75
PTPN4-210ENST00000485247 TSPAN19P0C672 248 aa4.13□□□□□ -1.75
PTPN4-210ENST00000485247 POU3F4P49335 361 aa4.13□□□□□ -1.75
PTPN4-210ENST00000485247 SLC35B1P78383 322 aa4.13□□□□□ -1.75
PTPN4-210ENST00000485247 FADDQ13158 208 aa4.13□□□□□ -1.75
PTPN4-210ENST00000485247 ZNF273Q14593 569 aa4.13□□□□□ -1.75
PTPN4-210ENST00000485247 KIR2DS1Q14954 304 aa4.13□□□□□ -1.75
PTPN4-210ENST00000485247 KRT72Q14CN4 511 aa4.13□□□□□ -1.75
PTPN4-210ENST00000485247 HAGHQ16775 308 aa4.13□□□□□ -1.75
PTPN4-210ENST00000485247 MEP1BQ16820 701 aa4.13□□□□□ -1.75
PTPN4-210ENST00000485247 DUSP7Q16829 419 aa4.13□□□□□ -1.75
PTPN4-210ENST00000485247 SNAI3Q3KNW1 292 aa4.13□□□□□ -1.75
PTPN4-210ENST00000485247 GCNT6Q5T4J0 391 aa4.13□□□□□ -1.75
PTPN4-210ENST00000485247 ZNF770Q6IQ21 691 aaPredicted RBP4.13□□□□□ -1.75
PTPN4-210ENST00000485247 C8orf74Q6P047 294 aa4.13□□□□□ -1.75
PTPN4-210ENST00000485247 CFAP77Q6ZQR2 320 aa4.13□□□□□ -1.75
PTPN4-210ENST00000485247 CPLX4Q7Z7G2 160 aa4.13□□□□□ -1.75
PTPN4-210ENST00000485247 ZNF429Q86V71 674 aa4.13□□□□□ -1.75
PTPN4-210ENST00000485247 MICU2Q8IYU8 434 aa4.13□□□□□ -1.75
PTPN4-210ENST00000485247 CNPY4Q8N129 248 aa4.13□□□□□ -1.75
PTPN4-210ENST00000485247 DPP10Q8N608 796 aa4.13□□□□□ -1.75
PTPN4-210ENST00000485247 GJC3Q8NFK1 279 aa4.13□□□□□ -1.75
PTPN4-210ENST00000485247 OR11H6Q8NGC7 330 aa4.13□□□□□ -1.75
PTPN4-210ENST00000485247 OR56B2PQ8NGI1 322 aa4.13□□□□□ -1.75
PTPN4-210ENST00000485247 OR4D11Q8NGI4 311 aa4.13□□□□□ -1.75
PTPN4-210ENST00000485247 OR13D1Q8NGV5 346 aa4.13□□□□□ -1.75
PTPN4-210ENST00000485247 OR2T27Q8NH04 317 aa4.13□□□□□ -1.75
PTPN4-210ENST00000485247 CHPT1Q8WUD6 406 aa4.13□□□□□ -1.75
PTPN4-210ENST00000485247 TMEM255BQ8WV15 326 aa4.13□□□□□ -1.75
PTPN4-210ENST00000485247 ZIM3Q96PE6 472 aa4.13□□□□□ -1.75
PTPN4-210ENST00000485247 RBM14Q96PK6 669 aaKnown RBP4.13□□□□□ -1.75
PTPN4-210ENST00000485247 PITX2Q99697 317 aa4.13□□□□□ -1.75
Retrieved 100 of 20,778 RNA–protein pairs in 88.5 ms