RNA–Protein interactions for RNA: ENST00000483847.1

SMARCC1-205, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin subfamily c member 1, humanhuman

TSL 2

Gene SMARCC1, Length 804 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCC1-205ENST00000483847 OR2T27Q8NH04 317 aa8.67□□□□□ -1.02
SMARCC1-205ENST00000483847 DYDC1Q8WWB3 177 aa8.67□□□□□ -1.02
SMARCC1-205ENST00000483847 PIGCQ92535 297 aa8.67□□□□□ -1.02
SMARCC1-205ENST00000483847 C7orf34Q96L11 122 aa8.67□□□□□ -1.02
SMARCC1-205ENST00000483847 DHRS1Q96LJ7 313 aa8.67□□□□□ -1.02
SMARCC1-205ENST00000483847 ZNF488Q96MN9 340 aa8.67□□□□□ -1.02
SMARCC1-205ENST00000483847 AMELYQ99218 206 aa8.67□□□□□ -1.02
SMARCC1-205ENST00000483847 ZNF649Q9BS31 505 aa8.67□□□□□ -1.02
SMARCC1-205ENST00000483847 KRCC1Q9NPI7 259 aaPredicted RBP8.67□□□□□ -1.02
SMARCC1-205ENST00000483847 CSMD3Q7Z407 3707 aa8.66□□□□□ -1.02
SMARCC1-205ENST00000483847 hCG_1809904A0A1W2PP81 198 aa8.66□□□□□ -1.02
SMARCC1-205ENST00000483847 A0A1W2PPE2 198 aa8.66□□□□□ -1.02
SMARCC1-205ENST00000483847 A0A1W2PR64 198 aa8.66□□□□□ -1.02
SMARCC1-205ENST00000483847 A0A1W2PRV1 198 aa8.66□□□□□ -1.02
SMARCC1-205ENST00000483847 RFPL4AA6NLU0 287 aa8.66□□□□□ -1.02
SMARCC1-205ENST00000483847 C17orf98A8MV24 154 aa8.66□□□□□ -1.02
SMARCC1-205ENST00000483847 FAM90A22PA8MWA6 464 aa8.66□□□□□ -1.02
SMARCC1-205ENST00000483847 RFPL4AL1F8VTS6 287 aa8.66□□□□□ -1.02
SMARCC1-205ENST00000483847 NME4O00746 187 aa8.66□□□□□ -1.02
SMARCC1-205ENST00000483847 GSTA4O15217 222 aa8.66□□□□□ -1.02
SMARCC1-205ENST00000483847 MTRF1O75570 445 aaKnown RBP8.66□□□□□ -1.02
SMARCC1-205ENST00000483847 CST4P01036 141 aa8.66□□□□□ -1.02
SMARCC1-205ENST00000483847 CFL1P23528 166 aaKnown RBP8.66□□□□□ -1.02
SMARCC1-205ENST00000483847 CD24P25063 80 aa8.66□□□□□ -1.02
SMARCC1-205ENST00000483847 HSD11B1P28845 292 aa8.66□□□□□ -1.02
SMARCC1-205ENST00000483847 SLC15A1P46059 708 aa8.66□□□□□ -1.02
SMARCC1-205ENST00000483847 THBS3P49746 956 aa8.66□□□□□ -1.02
SMARCC1-205ENST00000483847 GRB2P62993 217 aaKnown RBP8.66□□□□□ -1.02
SMARCC1-205ENST00000483847 SLC34A1Q06495 639 aa8.66□□□□□ -1.02
SMARCC1-205ENST00000483847 DYNC1I2Q13409 638 aaKnown RBP8.66□□□□□ -1.02
SMARCC1-205ENST00000483847 EIF2B1Q14232 305 aaKnown RBP8.66□□□□□ -1.02
SMARCC1-205ENST00000483847 ABCA11PQ4W5N1 156 aa8.66□□□□□ -1.02
SMARCC1-205ENST00000483847 C18orf65Q6ZTR6 163 aa8.66□□□□□ -1.02
SMARCC1-205ENST00000483847 ZDHHC23Q8IYP9 409 aa8.66□□□□□ -1.02
SMARCC1-205ENST00000483847 FTMTQ8N4E7 242 aa8.66□□□□□ -1.02
SMARCC1-205ENST00000483847 OR11H6Q8NGC7 330 aa8.66□□□□□ -1.02
SMARCC1-205ENST00000483847 OR52H1Q8NGJ2 320 aa8.66□□□□□ -1.02
SMARCC1-205ENST00000483847 PRR25Q96S07 402 aa8.66□□□□□ -1.02
SMARCC1-205ENST00000483847 OR51I2Q9H344 312 aa8.66□□□□□ -1.02
SMARCC1-205ENST00000483847 EGLN3Q9H6Z9 239 aa8.66□□□□□ -1.02
SMARCC1-205ENST00000483847 GID8Q9NWU2 228 aa8.66□□□□□ -1.02
SMARCC1-205ENST00000483847 FAM32AQ9Y421 112 aaKnown RBP8.66□□□□□ -1.02
SMARCC1-205ENST00000483847 ZNF732B4DXR9 585 aa8.65□□□□□ -1.02
SMARCC1-205ENST00000483847 SLC1A7O00341 560 aa8.65□□□□□ -1.02
SMARCC1-205ENST00000483847 ZFPL1O95159 310 aa8.65□□□□□ -1.02
SMARCC1-205ENST00000483847 AMY1AP04745 511 aa8.65□□□□□ -1.02
SMARCC1-205ENST00000483847 AMY2AP04746 511 aa8.65□□□□□ -1.02
SMARCC1-205ENST00000483847 CLUP10909 449 aa8.65□□□□□ -1.02
SMARCC1-205ENST00000483847 FMO3P31513 532 aa8.65□□□□□ -1.02
SMARCC1-205ENST00000483847 PRDX2P32119 198 aa8.65□□□□□ -1.02
SMARCC1-205ENST00000483847 GSSP48637 474 aa8.65□□□□□ -1.02
SMARCC1-205ENST00000483847 OR12D2P58182 307 aa8.65□□□□□ -1.02
SMARCC1-205ENST00000483847 TEX30Q5JUR7 227 aa8.65□□□□□ -1.02
SMARCC1-205ENST00000483847 ZNF770Q6IQ21 691 aaPredicted RBP8.65□□□□□ -1.02
SMARCC1-205ENST00000483847 ACP7Q6ZNF0 438 aa8.65□□□□□ -1.02
SMARCC1-205ENST00000483847 TIGD4Q8IY51 512 aa8.65□□□□□ -1.02
SMARCC1-205ENST00000483847 SLC37A3Q8NCC5 494 aa8.65□□□□□ -1.02
SMARCC1-205ENST00000483847 OR13D1Q8NGV5 346 aa8.65□□□□□ -1.02
SMARCC1-205ENST00000483847 BCAS4Q8TDM0 211 aa8.65□□□□□ -1.02
SMARCC1-205ENST00000483847 AQP3Q92482 292 aa8.65□□□□□ -1.02
SMARCC1-205ENST00000483847 FAM162AQ96A26 154 aa8.65□□□□□ -1.02
SMARCC1-205ENST00000483847 RCN3Q96D15 328 aa8.65□□□□□ -1.02
SMARCC1-205ENST00000483847 PGAM5Q96HS1 289 aa8.65□□□□□ -1.02
SMARCC1-205ENST00000483847 ABHD6Q9BV23 337 aa8.65□□□□□ -1.02
SMARCC1-205ENST00000483847 OR10A2Q9H208 303 aa8.65□□□□□ -1.02
SMARCC1-205ENST00000483847 C1orf21Q9H246 121 aa8.65□□□□□ -1.02
SMARCC1-205ENST00000483847 SAR1AQ9NR31 198 aa8.65□□□□□ -1.02
SMARCC1-205ENST00000483847 CD300AQ9UGN4 299 aa8.65□□□□□ -1.02
SMARCC1-205ENST00000483847 STARD9Q9P2P6 4700 aa8.65□□□□□ -1.02
SMARCC1-205ENST00000483847 HYDINQ4G0P3 5121 aa8.65□□□□□ -1.03
SMARCC1-205ENST00000483847 EDF1O60869 148 aaKnown RBP8.64□□□□□ -1.03
SMARCC1-205ENST00000483847 IGHV1-8P0DP01 117 aa8.64□□□□□ -1.03
SMARCC1-205ENST00000483847 SPI1P17947 270 aa8.64□□□□□ -1.03
SMARCC1-205ENST00000483847 AZGP1P25311 298 aaKnown RBP8.64□□□□□ -1.03
SMARCC1-205ENST00000483847 SF3A3Q12874 501 aaKnown RBP eCLIP8.64□□□□□ -1.035e-7■■■■■ 32.5
SMARCC1-205ENST00000483847 DOC2BQ14184 412 aa8.64□□□□□ -1.03
SMARCC1-205ENST00000483847 CRMP1Q14194 572 aa8.64□□□□□ -1.03
SMARCC1-205ENST00000483847 SNCBQ16143 134 aa8.64□□□□□ -1.03
SMARCC1-205ENST00000483847 CEP78Q5JTW2 689 aa8.64□□□□□ -1.03
SMARCC1-205ENST00000483847 DMRTA1Q5VZB9 504 aa8.64□□□□□ -1.03
SMARCC1-205ENST00000483847 LCN8Q6JVE9 175 aa8.64□□□□□ -1.03
SMARCC1-205ENST00000483847 HAGHLQ6PII5 290 aaPredicted RBP8.64□□□□□ -1.03
SMARCC1-205ENST00000483847 UNQ9370/PRO34162Q6UXP9 181 aa8.64□□□□□ -1.03
SMARCC1-205ENST00000483847 C8orf86Q6ZUL3 223 aa8.64□□□□□ -1.03
SMARCC1-205ENST00000483847 CALHM1Q8IU99 346 aa8.64□□□□□ -1.03
SMARCC1-205ENST00000483847 BATF2Q8N1L9 274 aa8.64□□□□□ -1.03
SMARCC1-205ENST00000483847 ZNF561Q8N587 486 aa8.64□□□□□ -1.03
SMARCC1-205ENST00000483847 OR8D4Q8NGM9 314 aa8.64□□□□□ -1.03
SMARCC1-205ENST00000483847 RNF133Q8WVZ7 376 aa8.64□□□□□ -1.03
SMARCC1-205ENST00000483847 DUX3Q96PT4 197 aa8.64□□□□□ -1.03
SMARCC1-205ENST00000483847 MCRIP2Q9BUT9 160 aaKnown RBP8.64□□□□□ -1.03
SMARCC1-205ENST00000483847 NMNAT2Q9BZQ4 307 aa8.64□□□□□ -1.03
SMARCC1-205ENST00000483847 RGCCQ9H4X1 137 aa8.64□□□□□ -1.03
SMARCC1-205ENST00000483847 ABCB9Q9NP78 766 aa8.64□□□□□ -1.03
SMARCC1-205ENST00000483847 DSCAML1Q8TD84 2053 aa8.63□□□□□ -1.03
SMARCC1-205ENST00000483847 SLC22A2O15244 555 aa8.63□□□□□ -1.03
SMARCC1-205ENST00000483847 GADD45GO95257 159 aa8.63□□□□□ -1.03
SMARCC1-205ENST00000483847 APOC1P02654 83 aa8.63□□□□□ -1.03
SMARCC1-205ENST00000483847 TK1P04183 234 aa8.63□□□□□ -1.03
SMARCC1-205ENST00000483847 ZNF728P0DKX0 622 aa8.63□□□□□ -1.03
Retrieved 100 of 20,778 RNA–protein pairs in 38.5 ms