RNA–Protein interactions for RNA: ENST00000482507.5

ATG4B-220, Transcript of autophagy related 4B cysteine peptidase, humanhuman

TSL 1 (best)

Gene ATG4B, Length 2,414 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATG4B-220ENST00000482507 TMEM231Q9H6L2 316 aa13.02□□□□□ -0.32
ATG4B-220ENST00000482507 SERPINA2P20848 420 aa13.02□□□□□ -0.33
ATG4B-220ENST00000482507 BLVRBP30043 206 aaPredicted RBP13.02□□□□□ -0.33
ATG4B-220ENST00000482507 GRB2P62993 217 aaKnown RBP13.02□□□□□ -0.33
ATG4B-220ENST00000482507 AIMP2Q13155 320 aaKnown RBP13.02□□□□□ -0.33
ATG4B-220ENST00000482507 IQCF2Q8IXL9 164 aa13.02□□□□□ -0.33
ATG4B-220ENST00000482507 ZNF385AQ96PM9 386 aaKnown RBP13.02□□□□□ -0.33
ATG4B-220ENST00000482507 EHFQ9NZC4 300 aa13.02□□□□□ -0.33
ATG4B-220ENST00000482507 LOXL2Q9Y4K0 774 aa13.02□□□□□ -0.33
ATG4B-220ENST00000482507 DBHP09172 617 aa13.01□□□□□ -0.33
ATG4B-220ENST00000482507 CTSSP25774 331 aa13.01□□□□□ -0.33
ATG4B-220ENST00000482507 ECH1Q13011 328 aa13.01□□□□□ -0.33
ATG4B-220ENST00000482507 HES3Q5TGS1 186 aa13.01□□□□□ -0.33
ATG4B-220ENST00000482507 ZNF585AQ6P3V2 769 aa13.01□□□□□ -0.33
ATG4B-220ENST00000482507 ESX1Q8N693 406 aa13.01□□□□□ -0.33
ATG4B-220ENST00000482507 PNLDC1Q8NA58 520 aaKnown RBP13.01□□□□□ -0.33
ATG4B-220ENST00000482507 SLC22A8Q8TCC7 542 aa13.01□□□□□ -0.33
ATG4B-220ENST00000482507 NABP1Q96AH0 204 aa13.01□□□□□ -0.33
ATG4B-220ENST00000482507 DEFB126Q9BYW3 111 aa13.01□□□□□ -0.33
ATG4B-220ENST00000482507 PCDHB16Q9NRJ7 776 aa13.01□□□□□ -0.33
ATG4B-220ENST00000482507 MCTS1Q9ULC4 181 aaKnown RBP13.01□□□□□ -0.33
ATG4B-220ENST00000482507 MT-CO3P00414 261 aa13.01□□□□□ -0.33
ATG4B-220ENST00000482507 CD63P08962 238 aa13.01□□□□□ -0.33
ATG4B-220ENST00000482507 HOXB5P09067 269 aa13.01□□□□□ -0.33
ATG4B-220ENST00000482507 PTGER4P35408 488 aa13.01□□□□□ -0.33
ATG4B-220ENST00000482507 OR3A2P47893 321 aa13.01□□□□□ -0.33
ATG4B-220ENST00000482507 H3F3AP84243 136 aa13.01□□□□□ -0.33
ATG4B-220ENST00000482507 TRA2AQ13595 282 aaKnown RBP eCLIP13.01□□□□□ -0.33
ATG4B-220ENST00000482507 RAB11FIP2Q7L804 512 aa13.01□□□□□ -0.33
ATG4B-220ENST00000482507 CBLN2Q8IUK8 224 aa13.01□□□□□ -0.33
ATG4B-220ENST00000482507 LRRC18Q8N456 261 aa13.01□□□□□ -0.33
ATG4B-220ENST00000482507 RNF141Q8WVD5 230 aa13.01□□□□□ -0.33
ATG4B-220ENST00000482507 PIGTQ969N2 578 aa13.01□□□□□ -0.33
ATG4B-220ENST00000482507 AQP10Q96PS8 301 aa13.01□□□□□ -0.33
ATG4B-220ENST00000482507 UCN2Q96RP3 112 aa13.01□□□□□ -0.33
ATG4B-220ENST00000482507 HDHD3Q9BSH5 251 aaPredicted RBP13.01□□□□□ -0.33
ATG4B-220ENST00000482507 TLNRD1Q9H1K6 362 aa13.01□□□□□ -0.33
ATG4B-220ENST00000482507 ZNF160Q9HCG1 818 aa13.01□□□□□ -0.33
ATG4B-220ENST00000482507 OR2S2Q9NQN1 319 aa13.01□□□□□ -0.33
ATG4B-220ENST00000482507 EXOSC5Q9NQT4 235 aaKnown RBP eCLIP13.01□□□□□ -0.33
ATG4B-220ENST00000482507 ZNF581Q9P0T4 197 aa13.01□□□□□ -0.33
ATG4B-220ENST00000482507 HDGFL3Q9Y3E1 203 aa13.01□□□□□ -0.33
ATG4B-220ENST00000482507 LAMA5O15230 3695 aa13□□□□□ -0.33
ATG4B-220ENST00000482507 LOC102725191A0A1B0GVB3 256 aa13□□□□□ -0.33
ATG4B-220ENST00000482507 FCGR2AP12318 317 aa13□□□□□ -0.33
ATG4B-220ENST00000482507 ALDH3B1P43353 468 aa13□□□□□ -0.33
ATG4B-220ENST00000482507 SLC6A9P48067 706 aa13□□□□□ -0.33
ATG4B-220ENST00000482507 STK11Q15831 433 aa13□□□□□ -0.33
ATG4B-220ENST00000482507 SLC5A7Q9GZV3 580 aa13□□□□□ -0.33
ATG4B-220ENST00000482507 METTL8Q9H825 291 aaKnown RBP13□□□□□ -0.33
ATG4B-220ENST00000482507 V9GYS6 101 aa13□□□□□ -0.33
ATG4B-220ENST00000482507 MYO7BQ6PIF6 2116 aa13□□□□□ -0.33
ATG4B-220ENST00000482507 AHCTF1Q8WYP5 2266 aa13□□□□□ -0.33
ATG4B-220ENST00000482507 NDUFA2O43678 99 aa13□□□□□ -0.33
ATG4B-220ENST00000482507 FGF5P12034 268 aa13□□□□□ -0.33
ATG4B-220ENST00000482507 CBX5P45973 191 aa13□□□□□ -0.33
ATG4B-220ENST00000482507 SLC35A1P78382 337 aa13□□□□□ -0.33
ATG4B-220ENST00000482507 IL11RAQ14626 422 aa13□□□□□ -0.33
ATG4B-220ENST00000482507 C10orf91Q5T1B1 145 aa13□□□□□ -0.33
ATG4B-220ENST00000482507 C6orf201Q7Z4U5 140 aa13□□□□□ -0.33
ATG4B-220ENST00000482507 SLC25A43Q8WUT9 341 aaPredicted RBP13□□□□□ -0.33
ATG4B-220ENST00000482507 ZNF837Q96EG3 531 aaPredicted RBP13□□□□□ -0.33
ATG4B-220ENST00000482507 C2orf50Q96LR7 162 aa13□□□□□ -0.33
ATG4B-220ENST00000482507 GSKIPQ9P0R6 139 aa13□□□□□ -0.33
ATG4B-220ENST00000482507 ZNF629Q9UEG4 869 aaPredicted RBP13□□□□□ -0.33
ATG4B-220ENST00000482507 DHRS7CA6NNS2 312 aa12.99□□□□□ -0.33
ATG4B-220ENST00000482507 KNG1P01042 644 aa12.99□□□□□ -0.33
ATG4B-220ENST00000482507 CSTBP04080 98 aaKnown RBP12.99□□□□□ -0.33
ATG4B-220ENST00000482507 RCC1P18754 421 aaPredicted RBP12.99□□□□□ -0.33
ATG4B-220ENST00000482507 MSR1P21757 451 aa12.99□□□□□ -0.33
ATG4B-220ENST00000482507 IL32P24001 234 aa12.99□□□□□ -0.33
ATG4B-220ENST00000482507 CSNK1A1P48729 337 aa12.99□□□□□ -0.33
ATG4B-220ENST00000482507 LSM6P62312 80 aaKnown RBP12.99□□□□□ -0.33
ATG4B-220ENST00000482507 NHLH1Q02575 133 aa12.99□□□□□ -0.33
ATG4B-220ENST00000482507 SCRN3Q0VDG4 424 aa12.99□□□□□ -0.33
ATG4B-220ENST00000482507 ARL11Q969Q4 196 aa12.99□□□□□ -0.33
ATG4B-220ENST00000482507 GNRHR2Q96P88 292 aa12.99□□□□□ -0.33
ATG4B-220ENST00000482507 FAM96BQ9Y3D0 163 aa12.99□□□□□ -0.33
ATG4B-220ENST00000482507 G3V3Y1 287 aa12.99□□□□□ -0.33
ATG4B-220ENST00000482507 DHRS3O75911 302 aa12.99□□□□□ -0.33
ATG4B-220ENST00000482507 ONECUT2O95948 504 aa12.99□□□□□ -0.33
ATG4B-220ENST00000482507 H2AFB1P0C5Y9 115 aa12.99□□□□□ -0.33
ATG4B-220ENST00000482507 FTH1P19P0C7X4 201 aa12.99□□□□□ -0.33
ATG4B-220ENST00000482507 THBS4P35443 961 aa12.99□□□□□ -0.33
ATG4B-220ENST00000482507 TAS2R46P59540 309 aa12.99□□□□□ -0.33
ATG4B-220ENST00000482507 PCOLCEQ15113 449 aa12.99□□□□□ -0.33
ATG4B-220ENST00000482507 CDCP2Q5VXM1 449 aa12.99□□□□□ -0.33
ATG4B-220ENST00000482507 RPL7L1Q6DKI1 246 aaKnown RBP12.99□□□□□ -0.33
ATG4B-220ENST00000482507 MRPL14Q6P1L8 145 aaKnown RBP12.99□□□□□ -0.33
ATG4B-220ENST00000482507 SLC16A14Q7RTX9 510 aa12.99□□□□□ -0.33
ATG4B-220ENST00000482507 TMEM54Q969K7 222 aa12.99□□□□□ -0.33
ATG4B-220ENST00000482507 TM2D1Q9BX74 207 aa12.99□□□□□ -0.33
ATG4B-220ENST00000482507 ACKR4Q9NPB9 350 aa12.99□□□□□ -0.33
ATG4B-220ENST00000482507 PLA2G2EQ9NZK7 142 aa12.99□□□□□ -0.33
ATG4B-220ENST00000482507 PIGLQ9Y2B2 252 aa12.99□□□□□ -0.33
ATG4B-220ENST00000482507 FIGNL2A6NMB9 653 aa12.98□□□□□ -0.33
ATG4B-220ENST00000482507 ZNF705EA8MWA4 302 aaPredicted RBP12.98□□□□□ -0.33
ATG4B-220ENST00000482507 ADH6P28332 368 aa12.98□□□□□ -0.33
ATG4B-220ENST00000482507 EIF1P41567 113 aaKnown RBP12.98□□□□□ -0.33
ATG4B-220ENST00000482507 PRSS12P56730 875 aa12.98□□□□□ -0.33
Retrieved 100 of 20,778 RNA–protein pairs in 48.1 ms